Definition | Xylella fastidiosa M23 chromosome, complete genome. |
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Accession | NC_010577 |
Length | 2,535,690 |
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The map label for this gene is 182682148
Identifier: 182682148
GI number: 182682148
Start: 1803307
End: 1803720
Strand: Reverse
Name: 182682148
Synonym: XfasM23_1626
Alternate gene names: NA
Gene position: 1803720-1803307 (Counterclockwise)
Preceding gene: 182682149
Following gene: 182682147
Centisome position: 71.13
GC content: 38.89
Gene sequence:
>414_bases ATGCCTGCCCGAAGTAATAGAAACAGAATTAATAGCGCGCTACGTGGTCAACTTCTTCGATATCTGCTTAATGGGCTAGT CGCAACTGCTGTCCATTACACTATTTTGCGATTTACTTTGGAAGTACTTGGCCTGCATTCAGCGGGATTGGCAAATGGTA TTGCAGCTATATTCGGAATCATCGTTTCTTTTATTGGCAACCGTTATTTTGTTTTCCGTATAGTGCAAGTGCCGTTGGCT AAGCAGGCATTGCTGTTTATATTGACGTATTTTTGCATCGCCTTAATACATACGTGCATCTTGTATTTTTGGACTGACGT TTACAATTTGAACTATACCCTTGGTTTTTTGATGGCTACTGCTATGCAAGTCGTTTTTAGTTTCTTTTCTAATAAATTCA TGGTTTTCAAATGA
Upstream 100 bases:
>100_bases GCGGCGTTGACTTTACTTCTTCTGATGATGTCTGGAATCATCCGTAGTAGTGGTGTATCGCCTCCAGAGACTTACAAGGG TTTTATTGAAGAGATCCTGT
Downstream 100 bases:
>100_bases ATATGTTTTTCAAATCAGCTTTGGTTACGTTTGTTTTTATTGTATTCATGCTGGCTTTTTATTATATACATATTATTTAT TTTAAAGTGAATGTTGTCTT
Product: GtrA family protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 137; Mature: 136
Protein sequence:
>137_residues MPARSNRNRINSALRGQLLRYLLNGLVATAVHYTILRFTLEVLGLHSAGLANGIAAIFGIIVSFIGNRYFVFRIVQVPLA KQALLFILTYFCIALIHTCILYFWTDVYNLNYTLGFLMATAMQVVFSFFSNKFMVFK
Sequences:
>Translated_137_residues MPARSNRNRINSALRGQLLRYLLNGLVATAVHYTILRFTLEVLGLHSAGLANGIAAIFGIIVSFIGNRYFVFRIVQVPLA KQALLFILTYFCIALIHTCILYFWTDVYNLNYTLGFLMATAMQVVFSFFSNKFMVFK >Mature_136_residues PARSNRNRINSALRGQLLRYLLNGLVATAVHYTILRFTLEVLGLHSAGLANGIAAIFGIIVSFIGNRYFVFRIVQVPLAK QALLFILTYFCIALIHTCILYFWTDVYNLNYTLGFLMATAMQVVFSFFSNKFMVFK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 15585; Mature: 15454
Theoretical pI: Translated: 10.49; Mature: 10.49
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 4.4 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPARSNRNRINSALRGQLLRYLLNGLVATAVHYTILRFTLEVLGLHSAGLANGIAAIFGI CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH IVSFIGNRYFVFRIVQVPLAKQALLFILTYFCIALIHTCILYFWTDVYNLNYTLGFLMAT HHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH AMQVVFSFFSNKFMVFK HHHHHHHHHCCCCEECC >Mature Secondary Structure PARSNRNRINSALRGQLLRYLLNGLVATAVHYTILRFTLEVLGLHSAGLANGIAAIFGI CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH IVSFIGNRYFVFRIVQVPLAKQALLFILTYFCIALIHTCILYFWTDVYNLNYTLGFLMAT HHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH AMQVVFSFFSNKFMVFK HHHHHHHHHCCCCEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA