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The map label for this gene is scpB [H]

Identifier: 182682077

GI number: 182682077

Start: 1728805

End: 1729548

Strand: Direct

Name: scpB [H]

Synonym: XfasM23_1555

Alternate gene names: 182682077

Gene position: 1728805-1729548 (Clockwise)

Preceding gene: 182682076

Following gene: 182682078

Centisome position: 68.18

GC content: 51.48

Gene sequence:

>744_bases
ATGTCCCCCCATGAAGCCGACAACCAGCTGGATTTGACATTGATCGCACGCATCGTCGAAGGTGCATTGCTGGCCAGCAA
TCAACCACTAACACTGGCGCAACTGCAAGGCTTGTTCCCAAACGACCCACCGATCCCCCCGGATAGCATCCAGCGTGCCA
TTGAACTGCTACAGCACACCTGTACTGAACGCAGCGTAGAACTGGTGGAAGTAGCCTCCGGTTTCCGTTTTCAACTCAAA
GCAGATGTGCATGCTTGGGTCAGCCCGCTCTGGACAGAACGCAAGACAAAATACTCTCGCGCCACACTTGAAACCTTAGC
CCTCATTGCCTACCGCCAACCGATCACACGTGGAGAAATCGAGCAAATACGCGGCGTCGCCGTCAACAGCAATATTATTC
ACACATTGGAAGAACGCGAATGGATTCGTGTTGTCGGCCATCGCGATGCACCTGGCAAACCAGCATTATTCGGTACTACC
AAAGCATTTCTAGATTACTTCGGACTTAAACGTCTGGACGAACTACCGCCACTATCGGACCTGAAAGACATTGGCGAACT
GGAACCGCAATTGCCGCTGCATAACAACCACCGACACACCGCACAGCTTCAAATTCAAACAGACCAGACTCCCAACAGAT
CAATATCAGGCACAACAGCCCCCATATCTGGCATTTCTCCGCAACCAACCCAAGAGGTGAATACCGATACACAGAGCAAC
AGACCTGATAACAATCGACCTTGA

Upstream 100 bases:

>100_bases
GAAGCTTCACTAGGCCCGATCTACATAAAATCCCTGGCCACCCATCACACCAACGGAGCGCTGCAGCTCTCCAGCGACTT
CGACAACAGCCCCTCAACCC

Downstream 100 bases:

>100_bases
AAATCACAACACCTCCCCCTTTCCCCTCGAAGACGTACCGGATAACAGCGTGACACCACCAAACGAACACGAAGACAACA
CCATCAACAAAACGTCTACA

Product: segregation and condensation protein B

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 247; Mature: 246

Protein sequence:

>247_residues
MSPHEADNQLDLTLIARIVEGALLASNQPLTLAQLQGLFPNDPPIPPDSIQRAIELLQHTCTERSVELVEVASGFRFQLK
ADVHAWVSPLWTERKTKYSRATLETLALIAYRQPITRGEIEQIRGVAVNSNIIHTLEEREWIRVVGHRDAPGKPALFGTT
KAFLDYFGLKRLDELPPLSDLKDIGELEPQLPLHNNHRHTAQLQIQTDQTPNRSISGTTAPISGISPQPTQEVNTDTQSN
RPDNNRP

Sequences:

>Translated_247_residues
MSPHEADNQLDLTLIARIVEGALLASNQPLTLAQLQGLFPNDPPIPPDSIQRAIELLQHTCTERSVELVEVASGFRFQLK
ADVHAWVSPLWTERKTKYSRATLETLALIAYRQPITRGEIEQIRGVAVNSNIIHTLEEREWIRVVGHRDAPGKPALFGTT
KAFLDYFGLKRLDELPPLSDLKDIGELEPQLPLHNNHRHTAQLQIQTDQTPNRSISGTTAPISGISPQPTQEVNTDTQSN
RPDNNRP
>Mature_246_residues
SPHEADNQLDLTLIARIVEGALLASNQPLTLAQLQGLFPNDPPIPPDSIQRAIELLQHTCTERSVELVEVASGFRFQLKA
DVHAWVSPLWTERKTKYSRATLETLALIAYRQPITRGEIEQIRGVAVNSNIIHTLEEREWIRVVGHRDAPGKPALFGTTK
AFLDYFGLKRLDELPPLSDLKDIGELEPQLPLHNNHRHTAQLQIQTDQTPNRSISGTTAPISGISPQPTQEVNTDTQSNR
PDNNRP

Specific function: May participate in chromosomal partitioning during cell division (Potential) [H]

COG id: COG1386

COG function: function code K; Predicted transcriptional regulator containing the HTH domain

Gene ontology:

Cell location: Cytoplasm (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the scpB family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005234
- InterPro:   IPR011991 [H]

Pfam domain/function: PF04079 DUF387 [H]

EC number: NA

Molecular weight: Translated: 27613; Mature: 27481

Theoretical pI: Translated: 6.09; Mature: 6.09

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
0.4 %Met     (Translated Protein)
0.8 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
0.0 %Met     (Mature Protein)
0.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSPHEADNQLDLTLIARIVEGALLASNQPLTLAQLQGLFPNDPPIPPDSIQRAIELLQHT
CCCCCCCCCHHHHHHHHHHHHHHHCCCCCEEHHHHCCCCCCCCCCCHHHHHHHHHHHHHH
CTERSVELVEVASGFRFQLKADVHAWVSPLWTERKTKYSRATLETLALIAYRQPITRGEI
HHHHHHHHHHHHCCCEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHH
EQIRGVAVNSNIIHTLEEREWIRVVGHRDAPGKPALFGTTKAFLDYFGLKRLDELPPLSD
HHHCCEEECCHHHHHHHHHHHHHEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCHHH
LKDIGELEPQLPLHNNHRHTAQLQIQTDQTPNRSISGTTAPISGISPQPTQEVNTDTQSN
HHHHHHCCCCCCCCCCCCEEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCHHCCCCCCCC
RPDNNRP
CCCCCCC
>Mature Secondary Structure 
SPHEADNQLDLTLIARIVEGALLASNQPLTLAQLQGLFPNDPPIPPDSIQRAIELLQHT
CCCCCCCCHHHHHHHHHHHHHHHCCCCCEEHHHHCCCCCCCCCCCHHHHHHHHHHHHHH
CTERSVELVEVASGFRFQLKADVHAWVSPLWTERKTKYSRATLETLALIAYRQPITRGEI
HHHHHHHHHHHHCCCEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHH
EQIRGVAVNSNIIHTLEEREWIRVVGHRDAPGKPALFGTTKAFLDYFGLKRLDELPPLSD
HHHCCEEECCHHHHHHHHHHHHHEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCHHH
LKDIGELEPQLPLHNNHRHTAQLQIQTDQTPNRSISGTTAPISGISPQPTQEVNTDTQSN
HHHHHHCCCCCCCCCCCCEEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCHHCCCCCCCC
RPDNNRP
CCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 12704232 [H]