Definition | Xylella fastidiosa M23 chromosome, complete genome. |
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Accession | NC_010577 |
Length | 2,535,690 |
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The map label for this gene is 182682040
Identifier: 182682040
GI number: 182682040
Start: 1684712
End: 1685263
Strand: Reverse
Name: 182682040
Synonym: XfasM23_1518
Alternate gene names: NA
Gene position: 1685263-1684712 (Counterclockwise)
Preceding gene: 182682041
Following gene: 182682039
Centisome position: 66.46
GC content: 59.6
Gene sequence:
>552_bases GTGACAACCGAACACTGCTTCATCGGTGTCTGCTTCATCCCCCTTGATGGCAGCGGCCAGACATTCTTTGGCTTCTCCCA ATTCCTCACCGGCCTGGCACTCATGGTCTTGGCCTGGACGATTGCCGATGTTCGCTACCGCTTCCGCATCCAAGTGGCTC CCCTCCCACTGCTGCGCATGAGCTTTTACGTCGTCGCTGCCATTGGCCTACTCACCCTGCTGACTGATCTATGGCGTGCC GAACAGTGGCTGGTGCCGCGCGGCATCCTGCTCACCCCGGCAGTGTGGCAAGCCCTTCTTGGCGGCGCATTCCTGCTGAC CATCCTGACCTGGGCCTGGTTAGGCTTCATCCGACCACCGACCTACGGTCAGTACAACGCCAAGCGCTTTGGGCAGACCC TGTATCGCATCATCCTCAATGGCTCCCCGACAGAACTCGCAGTGATCGCCGACGAACTCGCCCGCTCAGCCCAGGCACTG GTCCAACATGCCACCAACAGGTACAGCCTGCACAACGGTGAGCGTATTGAGTGTGAAGAAGAGGATCAGTAG
Upstream 100 bases:
>100_bases ACCAAGGCAGCCCCAGCGGCTGCCCTCATGGCCTTGCGGCTGGCCCCCGAAGTGGCATCAGCTGCATGACGCCGCCGACA CCGACAAAGAGAACCTCACC
Downstream 100 bases:
>100_bases GACCTCCCGCAGTTGAACAGAGACGCCAACGGCCTATTGCAGCTCATCGCTGACAAAAGGCTGTGCCGTGCCATTGTCGC GGAGTCACCACGCACGGCAC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 183; Mature: 182
Protein sequence:
>183_residues MTTEHCFIGVCFIPLDGSGQTFFGFSQFLTGLALMVLAWTIADVRYRFRIQVAPLPLLRMSFYVVAAIGLLTLLTDLWRA EQWLVPRGILLTPAVWQALLGGAFLLTILTWAWLGFIRPPTYGQYNAKRFGQTLYRIILNGSPTELAVIADELARSAQAL VQHATNRYSLHNGERIECEEEDQ
Sequences:
>Translated_183_residues MTTEHCFIGVCFIPLDGSGQTFFGFSQFLTGLALMVLAWTIADVRYRFRIQVAPLPLLRMSFYVVAAIGLLTLLTDLWRA EQWLVPRGILLTPAVWQALLGGAFLLTILTWAWLGFIRPPTYGQYNAKRFGQTLYRIILNGSPTELAVIADELARSAQAL VQHATNRYSLHNGERIECEEEDQ >Mature_182_residues TTEHCFIGVCFIPLDGSGQTFFGFSQFLTGLALMVLAWTIADVRYRFRIQVAPLPLLRMSFYVVAAIGLLTLLTDLWRAE QWLVPRGILLTPAVWQALLGGAFLLTILTWAWLGFIRPPTYGQYNAKRFGQTLYRIILNGSPTELAVIADELARSAQALV QHATNRYSLHNGERIECEEEDQ
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 20636; Mature: 20505
Theoretical pI: Translated: 6.77; Mature: 6.77
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTTEHCFIGVCFIPLDGSGQTFFGFSQFLTGLALMVLAWTIADVRYRFRIQVAPLPLLRM CCCCCEEEEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEECCCHHHHH SFYVVAAIGLLTLLTDLWRAEQWLVPRGILLTPAVWQALLGGAFLLTILTWAWLGFIRPP HHHHHHHHHHHHHHHHHHHHHHHCCCCCCEECHHHHHHHHHHHHHHHHHHHHHHHHCCCC TYGQYNAKRFGQTLYRIILNGSPTELAVIADELARSAQALVQHATNRYSLHNGERIECEE CCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCC EDQ CCC >Mature Secondary Structure TTEHCFIGVCFIPLDGSGQTFFGFSQFLTGLALMVLAWTIADVRYRFRIQVAPLPLLRM CCCCEEEEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEECCCHHHHH SFYVVAAIGLLTLLTDLWRAEQWLVPRGILLTPAVWQALLGGAFLLTILTWAWLGFIRPP HHHHHHHHHHHHHHHHHHHHHHHCCCCCCEECHHHHHHHHHHHHHHHHHHHHHHHHCCCC TYGQYNAKRFGQTLYRIILNGSPTELAVIADELARSAQALVQHATNRYSLHNGERIECEE CCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCC EDQ CCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA