Click here to switch to the map view.

The map label for this gene is 182681961

Identifier: 182681961

GI number: 182681961

Start: 1586258

End: 1586863

Strand: Direct

Name: 182681961

Synonym: XfasM23_1434

Alternate gene names: NA

Gene position: 1586258-1586863 (Clockwise)

Preceding gene: 182681960

Following gene: 182681962

Centisome position: 62.56

GC content: 50.33

Gene sequence:

>606_bases
ATGCCCTTCCTTGATCTGCCACCGCAAATACAAGAGCGCGTTGTTTGCTCGATTACTGCTGCCGTCAAGTACGAAGTTCC
AGCAAACATTGTATTGGCAGTAGCCGAACAAGAGGGCGGCAAGCCAGGCCAATGGGTCAGGAACACAAATGGCACACATG
ATGTGGGACCAATGCAGTTCAATACGGCCTATCTGGTCGAGCTACGTCAATATGGGATCACGCCACAAGACGTAGCACGG
GGTGGTTGCTATTCCTATGATCTGGCTGCGTGGCGTTTGCGTGTTCACTTACGTAATGATCAAGGTGACATTTGGACGCG
GGCTGCGAATTACCATTCGCGTACACCGCAATATAATGCTGTTTATCGCATCTCTCTCATTAAGCGTGCCGGTAAGTGGG
AAAACTGGCTCGTCGCTCGCTTTCCCACGTTTGACACCATACAAGCGAGTAAGCCGGTTATGGCAGCTAATACGACACCA
AGGGTAAAGCTTGAGATGCCAAGGTCTTCCGTCGTGAATACCTCAATGCCCGTTGGGCATTACAATGCAGCAGCAGCAGA
TGCTCTTGAGGCAGTCTTTGGACAGAAAGATTTAAGGAGAGAATGA

Upstream 100 bases:

>100_bases
GTGACAGCCTAGCAGGTGCAGCTCAGAGAGGTTCTGAGACGGCCATGCATGATGAGGTCGCTGCCTTTGTGAACAAAGGT
AAGCAGCATGAGTAATCACG

Downstream 100 bases:

>100_bases
CACAAATATATTAAAGATAATCAAAAGAGCCTCCAAGCATCCCTAATAATTTTGTTGTATCTCTTGTATTCCATAAAGGA
TAAAAAACTTGCATCCTATA

Product: conjugal transfer protein TrbN

Products: NA

Alternate protein names: Lytic Transglycosylase Catalytic; TrbN Protein; Lytic Transglycosylase; Conjugal Transfer Protein; Muramidase TrbN; Lytic Murein Transglycosylase; TrbN Protein Of DNA Transfer System; Conjugal Muramidase TrbN/BfpH; Pilin Biogenesis Protein

Number of amino acids: Translated: 201; Mature: 200

Protein sequence:

>201_residues
MPFLDLPPQIQERVVCSITAAVKYEVPANIVLAVAEQEGGKPGQWVRNTNGTHDVGPMQFNTAYLVELRQYGITPQDVAR
GGCYSYDLAAWRLRVHLRNDQGDIWTRAANYHSRTPQYNAVYRISLIKRAGKWENWLVARFPTFDTIQASKPVMAANTTP
RVKLEMPRSSVVNTSMPVGHYNAAAADALEAVFGQKDLRRE

Sequences:

>Translated_201_residues
MPFLDLPPQIQERVVCSITAAVKYEVPANIVLAVAEQEGGKPGQWVRNTNGTHDVGPMQFNTAYLVELRQYGITPQDVAR
GGCYSYDLAAWRLRVHLRNDQGDIWTRAANYHSRTPQYNAVYRISLIKRAGKWENWLVARFPTFDTIQASKPVMAANTTP
RVKLEMPRSSVVNTSMPVGHYNAAAADALEAVFGQKDLRRE
>Mature_200_residues
PFLDLPPQIQERVVCSITAAVKYEVPANIVLAVAEQEGGKPGQWVRNTNGTHDVGPMQFNTAYLVELRQYGITPQDVARG
GCYSYDLAAWRLRVHLRNDQGDIWTRAANYHSRTPQYNAVYRISLIKRAGKWENWLVARFPTFDTIQASKPVMAANTTPR
VKLEMPRSSVVNTSMPVGHYNAAAADALEAVFGQKDLRRE

Specific function: Unknown

COG id: COG0741

COG function: function code M; Soluble lytic murein transglycosylase and related regulatory proteins (some contain LysM/invasin domains)

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 22575; Mature: 22444

Theoretical pI: Translated: 9.53; Mature: 9.53

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPFLDLPPQIQERVVCSITAAVKYEVPANIVLAVAEQEGGKPGQWVRNTNGTHDVGPMQF
CCCCCCCHHHHHHEEEEEEEEEEEECCCEEEEEEECCCCCCCCCEEECCCCCCCCCCEEE
NTAYLVELRQYGITPQDVARGGCYSYDLAAWRLRVHLRNDQGDIWTRAANYHSRTPQYNA
CHHHEEEHHHHCCCHHHHHCCCCEEECEEEEEEEEEEECCCCCEEEEECCCCCCCCCCCE
VYRISLIKRAGKWENWLVARFPTFDTIQASKPVMAANTTPRVKLEMPRSSVVNTSMPVGH
EEEEEEEHHCCCCCCEEEEECCCCCCCCCCCCEEECCCCCEEEEECCCCHHCCCCCCCCC
YNAAAADALEAVFGQKDLRRE
CCHHHHHHHHHHHCCHHHCCC
>Mature Secondary Structure 
PFLDLPPQIQERVVCSITAAVKYEVPANIVLAVAEQEGGKPGQWVRNTNGTHDVGPMQF
CCCCCCHHHHHHEEEEEEEEEEEECCCEEEEEEECCCCCCCCCEEECCCCCCCCCCEEE
NTAYLVELRQYGITPQDVARGGCYSYDLAAWRLRVHLRNDQGDIWTRAANYHSRTPQYNA
CHHHEEEHHHHCCCHHHHHCCCCEEECEEEEEEEEEEECCCCCEEEEECCCCCCCCCCCE
VYRISLIKRAGKWENWLVARFPTFDTIQASKPVMAANTTPRVKLEMPRSSVVNTSMPVGH
EEEEEEEHHCCCCCCEEEEECCCCCCCCCCCCEEECCCCCEEEEECCCCHHCCCCCCCCC
YNAAAADALEAVFGQKDLRRE
CCHHHHHHHHHHHCCHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA