Definition | Xylella fastidiosa M23 chromosome, complete genome. |
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Accession | NC_010577 |
Length | 2,535,690 |
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The map label for this gene is 182681957
Identifier: 182681957
GI number: 182681957
Start: 1583704
End: 1584309
Strand: Reverse
Name: 182681957
Synonym: XfasM23_1430
Alternate gene names: NA
Gene position: 1584309-1583704 (Counterclockwise)
Preceding gene: 182681958
Following gene: 182681956
Centisome position: 62.48
GC content: 61.39
Gene sequence:
>606_bases ATGACTGCGTTCTATGGCCACGCCTGGGTGAATGTTCATGGTCAGTCGGCCCAAGACGAAGAAGGCGCCCTGACCGTGGC TGGTGAAACCTGGCAGAAGGCGCTGGTTGGGCTGGAGGCGTCTCAGTTTGCGGACGGGTTGGCGGCGTGCATTGCTGAAG GCGGCGAGTTTCCGCCCAGTGCGCCGCGGTTCCGTAGCATGTGTTTAGGCGTCCCATCCCTGGCGGCGGTACGGAGTCAC TTCACCGCAGGCACCACGCAACGCAATACGCCGTTTGTAGCCAAATGCTGGGAGTTCATCGACTCATGGAGCTATTGCCA GTCCAGCCGTGCTGAGGCTGATCGGATGCTGCGTGAGGCCTACGAGCAAGCGCGAGACTTTGTCATGCGTGGCGGCGTCC TGCCAGAGGTGCCTGTTGCCCTGATTGAGGCGCAACAGCCCGCAGCGCCCCAACCGGCCTCCCCTGACGTGGCTCACGCA GCGCTGGAGGAAATTAGCAGCATGTTTCATCACCCTGAGCTGGCCGCCCGTGAGGAAAAGCTCATGGCCGAATTCCACAT CAGCCGGAATCAGGCGCATGAGCTGATTGAATCGGGGGTGGTATGA
Upstream 100 bases:
>100_bases AGACAATTTGACCTGCGTGACGGATCGCTCCAGTAACACCGCTTCCCTTGCGCAAGCCACGGTGATCCCGTTCCCCTGGC TGCGCCGCTTATGGGAGCGG
Downstream 100 bases:
>100_bases GCAAGGCGATGCCTATGGCTGCCTGCGCCATGGCAGGAGTGAAGCAGATGCAATCTTTAACATTGCCGTGGCCCTCCAAG GACCTGTCACCGAACGCACG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 201; Mature: 200
Protein sequence:
>201_residues MTAFYGHAWVNVHGQSAQDEEGALTVAGETWQKALVGLEASQFADGLAACIAEGGEFPPSAPRFRSMCLGVPSLAAVRSH FTAGTTQRNTPFVAKCWEFIDSWSYCQSSRAEADRMLREAYEQARDFVMRGGVLPEVPVALIEAQQPAAPQPASPDVAHA ALEEISSMFHHPELAAREEKLMAEFHISRNQAHELIESGVV
Sequences:
>Translated_201_residues MTAFYGHAWVNVHGQSAQDEEGALTVAGETWQKALVGLEASQFADGLAACIAEGGEFPPSAPRFRSMCLGVPSLAAVRSH FTAGTTQRNTPFVAKCWEFIDSWSYCQSSRAEADRMLREAYEQARDFVMRGGVLPEVPVALIEAQQPAAPQPASPDVAHA ALEEISSMFHHPELAAREEKLMAEFHISRNQAHELIESGVV >Mature_200_residues TAFYGHAWVNVHGQSAQDEEGALTVAGETWQKALVGLEASQFADGLAACIAEGGEFPPSAPRFRSMCLGVPSLAAVRSHF TAGTTQRNTPFVAKCWEFIDSWSYCQSSRAEADRMLREAYEQARDFVMRGGVLPEVPVALIEAQQPAAPQPASPDVAHAA LEEISSMFHHPELAAREEKLMAEFHISRNQAHELIESGVV
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 21882; Mature: 21750
Theoretical pI: Translated: 4.79; Mature: 4.79
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.0 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 5.0 %Cys+Met (Translated Protein) 2.0 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 4.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTAFYGHAWVNVHGQSAQDEEGALTVAGETWQKALVGLEASQFADGLAACIAEGGEFPPS CCCEECEEEEEECCCCCCCCCCCEEECCHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCCC APRFRSMCLGVPSLAAVRSHFTAGTTQRNTPFVAKCWEFIDSWSYCQSSRAEADRMLREA CHHHHHHHHCCHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH YEQARDFVMRGGVLPEVPVALIEAQQPAAPQPASPDVAHAALEEISSMFHHPELAAREEK HHHHHHHHHHCCCCCHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHH LMAEFHISRNQAHELIESGVV HHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure TAFYGHAWVNVHGQSAQDEEGALTVAGETWQKALVGLEASQFADGLAACIAEGGEFPPS CCEECEEEEEECCCCCCCCCCCEEECCHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCCC APRFRSMCLGVPSLAAVRSHFTAGTTQRNTPFVAKCWEFIDSWSYCQSSRAEADRMLREA CHHHHHHHHCCHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH YEQARDFVMRGGVLPEVPVALIEAQQPAAPQPASPDVAHAALEEISSMFHHPELAAREEK HHHHHHHHHHCCCCCHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHH LMAEFHISRNQAHELIESGVV HHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA