Definition | Xylella fastidiosa M23 chromosome, complete genome. |
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Accession | NC_010577 |
Length | 2,535,690 |
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The map label for this gene is 182681955
Identifier: 182681955
GI number: 182681955
Start: 1582419
End: 1583117
Strand: Reverse
Name: 182681955
Synonym: XfasM23_1428
Alternate gene names: NA
Gene position: 1583117-1582419 (Counterclockwise)
Preceding gene: 182681956
Following gene: 182681954
Centisome position: 62.43
GC content: 65.52
Gene sequence:
>699_bases ATGACTGATCCGCGACGCTTACTGGCTCGTTTGAACCCGAGCACGATCCGCTACGACACGCTACCTGGTGGAGTGCCTGA GTTGACAGCGCAAGACATTGCCCATGCCCTGGGGCTGGTGCCTGCGGGGTTGGGGCGTGAGGTACTGCAAGCGTGCTGGT GGCCGGATGGCGCAGCGTTGCGCCGTAGCCCCTTGCGCGATGCGGCGGTGGCCTTGGTGGTGCCGGAGATTCGACGGCAG CAGCAGCGCTTGCTGGAAGCGCGTACCGATGTGGGCATTGTCAAAGCGTGCATGGGGTGGACCCGAGTAACGACAAGCAC ACAGCAGGCGGCGCTCAGGCGTGCGCAGGAGCGGCTGGACAAGCTCAAAGCCCACCTGTGGCCGCAGGCGACGTTGGAGA TGTTACCGGTACTGGTTGCGGCGGTGGTGGGTGAGCTGTCCACGCCGCAGTTATGCCCCTGCTGTCATGGTCGGGGGGAA CGGCGTGTAGGGGCGTTGGTGAAGGTGTGCACGGCGTGCGGGGGCAGCGGTGCGGTTCCCGCCAGTGACCGCAAGCGTGC CGCTGCCCTTGGCCGGGACGAATCCACCTACCGCACGACATGGCGCGGCCTGTATGAGTGGCTGTTGGAGCGGATGGGTG TTGCGGAACGACAGGCGGCGACGCAGTTGCAAGAGGCGTTGCAGACAGATGCTGCGTGA
Upstream 100 bases:
>100_bases GACCAACGTTTATTCAGGTGATGCCTACCTGAGCGCTATGAAGCGCCTGGTGACTGCTTCTGGTCACCGCTTTTGACGTA AAACCCACAGGACATCCGCC
Downstream 100 bases:
>100_bases TGTGCTCGTTGACCTCTCGCATTAGGTACTATATTATAGTACCATATAATCTATGAAGCGTAAGCACGCTAAAACTCTCA GCGCTATATACACACGCCCT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 232; Mature: 231
Protein sequence:
>232_residues MTDPRRLLARLNPSTIRYDTLPGGVPELTAQDIAHALGLVPAGLGREVLQACWWPDGAALRRSPLRDAAVALVVPEIRRQ QQRLLEARTDVGIVKACMGWTRVTTSTQQAALRRAQERLDKLKAHLWPQATLEMLPVLVAAVVGELSTPQLCPCCHGRGE RRVGALVKVCTACGGSGAVPASDRKRAAALGRDESTYRTTWRGLYEWLLERMGVAERQAATQLQEALQTDAA
Sequences:
>Translated_232_residues MTDPRRLLARLNPSTIRYDTLPGGVPELTAQDIAHALGLVPAGLGREVLQACWWPDGAALRRSPLRDAAVALVVPEIRRQ QQRLLEARTDVGIVKACMGWTRVTTSTQQAALRRAQERLDKLKAHLWPQATLEMLPVLVAAVVGELSTPQLCPCCHGRGE RRVGALVKVCTACGGSGAVPASDRKRAAALGRDESTYRTTWRGLYEWLLERMGVAERQAATQLQEALQTDAA >Mature_231_residues TDPRRLLARLNPSTIRYDTLPGGVPELTAQDIAHALGLVPAGLGREVLQACWWPDGAALRRSPLRDAAVALVVPEIRRQQ QRLLEARTDVGIVKACMGWTRVTTSTQQAALRRAQERLDKLKAHLWPQATLEMLPVLVAAVVGELSTPQLCPCCHGRGER RVGALVKVCTACGGSGAVPASDRKRAAALGRDESTYRTTWRGLYEWLLERMGVAERQAATQLQEALQTDAA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 25318; Mature: 25186
Theoretical pI: Translated: 9.47; Mature: 9.47
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.0 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 4.7 %Cys+Met (Translated Protein) 3.0 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 4.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTDPRRLLARLNPSTIRYDTLPGGVPELTAQDIAHALGLVPAGLGREVLQACWWPDGAAL CCCHHHHHHHCCCCCEEECCCCCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHCCCCCHHH RRSPLRDAAVALVVPEIRRQQQRLLEARTDVGIVKACMGWTRVTTSTQQAALRRAQERLD HHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHH KLKAHLWPQATLEMLPVLVAAVVGELSTPQLCPCCHGRGERRVGALVKVCTACGGSGAVP HHHHHCCCHHHHHHHHHHHHHHHHCCCCCCCCHHHCCCCHHHHHHHHHHHHHCCCCCCCC ASDRKRAAALGRDESTYRTTWRGLYEWLLERMGVAERQAATQLQEALQTDAA CCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure TDPRRLLARLNPSTIRYDTLPGGVPELTAQDIAHALGLVPAGLGREVLQACWWPDGAAL CCHHHHHHHCCCCCEEECCCCCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHCCCCCHHH RRSPLRDAAVALVVPEIRRQQQRLLEARTDVGIVKACMGWTRVTTSTQQAALRRAQERLD HHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHH KLKAHLWPQATLEMLPVLVAAVVGELSTPQLCPCCHGRGERRVGALVKVCTACGGSGAVP HHHHHCCCHHHHHHHHHHHHHHHHCCCCCCCCHHHCCCCHHHHHHHHHHHHHCCCCCCCC ASDRKRAAALGRDESTYRTTWRGLYEWLLERMGVAERQAATQLQEALQTDAA CCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA