Definition | Xylella fastidiosa M23 chromosome, complete genome. |
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Accession | NC_010577 |
Length | 2,535,690 |
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The map label for this gene is 182681944
Identifier: 182681944
GI number: 182681944
Start: 1574203
End: 1574586
Strand: Reverse
Name: 182681944
Synonym: XfasM23_1415
Alternate gene names: NA
Gene position: 1574586-1574203 (Counterclockwise)
Preceding gene: 182681945
Following gene: 182681942
Centisome position: 62.1
GC content: 39.06
Gene sequence:
>384_bases ATGATAAGTTGCATTGATCATATTGTTATCACCACTAGGGATATCAAAGTATGCTCTGATTTTTATACTCGTATACTGGG AATGGAGCTGATCCAGTTTGGTGATAACAGAATCGCGTTCAAGTTTGGACAACAAAAAATAAACGTTCACGAATATGGTA AAGAGATAGAGCCTAAAGCGCATCTTCCTGTTCCTGGTTCCCTGGATATCTGCCTGATAAGTTCTTACTCAATTGATGAG ATAAAGAAGGTTTTAGAAAAAAACGACATTGTGATTGTCGATGGTCCGGTATCCCGGACGGGGGCGTGCGGTGCTATAAC TTCACTATATCTGCGTGATCCTGACCTTAATCTTATAGAAATCTCGAATTATGAAAATCACTAA
Upstream 100 bases:
>100_bases GAAATTTCCGTCAACAGAATGTTTAGATTAGAAGCTAACTGGCGAAAATACTGTTCGCCATTTAGTGTAGCAAGTGATTT TATTAAACAAGGGGTTGTAA
Downstream 100 bases:
>100_bases CCGCTGGTGATAATGTCCGCGCTGTTAGGGGGTTGACGCTCAGTGGAACGAAAACGGTTCTGTCGCATTAAGGCCGCGTC GGGTAGCATCGCAAAAAGAA
Product: glyoxalase/bleomycin resistance protein/dioxygenase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 127; Mature: 127
Protein sequence:
>127_residues MISCIDHIVITTRDIKVCSDFYTRILGMELIQFGDNRIAFKFGQQKINVHEYGKEIEPKAHLPVPGSLDICLISSYSIDE IKKVLEKNDIVIVDGPVSRTGACGAITSLYLRDPDLNLIEISNYENH
Sequences:
>Translated_127_residues MISCIDHIVITTRDIKVCSDFYTRILGMELIQFGDNRIAFKFGQQKINVHEYGKEIEPKAHLPVPGSLDICLISSYSIDE IKKVLEKNDIVIVDGPVSRTGACGAITSLYLRDPDLNLIEISNYENH >Mature_127_residues MISCIDHIVITTRDIKVCSDFYTRILGMELIQFGDNRIAFKFGQQKINVHEYGKEIEPKAHLPVPGSLDICLISSYSIDE IKKVLEKNDIVIVDGPVSRTGACGAITSLYLRDPDLNLIEISNYENH
Specific function: Is critically involved in promoting the replication of S.typhimurium cells inside host macrophages, suggesting a role in the establishment of bacterial colonization within macrophages. May be involved in the biosynthesis and modification of the peptidogly
COG id: COG0346
COG function: function code E; Lactoylglutathione lyase and related lyases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Homo sapiens, GI254039722, Length=124, Percent_Identity=55.6451612903226, Blast_Score=144, Evalue=2e-35,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004360 [H]
Pfam domain/function: PF00903 Glyoxalase [H]
EC number: NA
Molecular weight: Translated: 14296; Mature: 14296
Theoretical pI: Translated: 5.16; Mature: 5.16
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.1 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 4.7 %Cys+Met (Translated Protein) 3.1 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 4.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MISCIDHIVITTRDIKVCSDFYTRILGMELIQFGDNRIAFKFGQQKINVHEYGKEIEPKA CCCCCCEEEEECCCHHHHHHHHHHHHHHHHHHCCCCEEEEEECCEEECHHHCCCCCCCCC HLPVPGSLDICLISSYSIDEIKKVLEKNDIVIVDGPVSRTGACGAITSLYLRDPDLNLIE CCCCCCCCCEEEEECCCHHHHHHHHCCCCEEEECCCCCCCCCCHHHEEEEEECCCCCEEE ISNYENH ECCCCCC >Mature Secondary Structure MISCIDHIVITTRDIKVCSDFYTRILGMELIQFGDNRIAFKFGQQKINVHEYGKEIEPKA CCCCCCEEEEECCCHHHHHHHHHHHHHHHHHHCCCCEEEEEECCEEECHHHCCCCCCCCC HLPVPGSLDICLISSYSIDEIKKVLEKNDIVIVDGPVSRTGACGAITSLYLRDPDLNLIE CCCCCCCCCEEEEECCCHHHHHHHHCCCCEEEECCCCCCCCCCHHHEEEEEECCCCCEEE ISNYENH ECCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 11677609 [H]