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The map label for this gene is opsX [H]

Identifier: 182681828

GI number: 182681828

Start: 1424623

End: 1425675

Strand: Direct

Name: opsX [H]

Synonym: XfasM23_1293

Alternate gene names: 182681828

Gene position: 1424623-1425675 (Clockwise)

Preceding gene: 182681826

Following gene: 182681830

Centisome position: 56.18

GC content: 53.37

Gene sequence:

>1053_bases
ATGGAGCAAAGACCCTATTCTCTATGCCTGTTACGCTTATCAGCACTTGGAGACATCACTCACGTGTTACCGCTGGTGCG
TACCCTGCAACGCGAACGACCCCAAGCACGGTTGCACTGGATCATTGATACCATGGGCAGCAAATTGATGGATGGACTTG
ATGGGATACACTTCCATGTCTACGACAAGCATACGGGCTTAAGAGGCATGCGCGCGCTACGTGCTGAACTCACACCATTA
GGCCACTTCGATGCACTTTTGCACATGCAAGTGTCATTGCGTGCCAACCTCCTGTCAGCATTTGTGCCAGCGCAGCGTCG
CATCGGCTACGACCACAATCGCTCCAAAGATTTGCATGGCTTATTCATCAATGAGCGCATCCCAGACAACCCCGGCATCC
ATGTGCTAGATGCGATCGGTAGCTTCTGCGAACCACTAGGCTTAGTACAGCGTGAAGTGCGCTGGGATCTGCCAGTGTCT
GAGGAAGCACGGGCCTGGGCCTGGGCACAGTGGAACAATGATGGTCGACCAGTATTGATGATCTCCCCCTGCTCCAGTCA
CACCCATCGAAATTGGCAGGCAAAACGTTACGCAGCAGTCGCAGAACATGCCAGCGCCCAAGGCTGGCGGATCGTCCTAT
GTGGTGGCCGCAGCACCCTAGAACGACAGACAGCAGACACCATTTTGGCGCAGACTCAGGTACCACTACTGGATATGGTT
GGCAAAGATACGCTCAAACAACTACCCGCCCTTCTTGAACGTGCCGACCTAGTCATGACCCCAGACTCTGGGCCGATGCA
TATCGCCAACGCATTAGGTAAAAAAGTATTGGGATTACATGCAGCAAGTAATCCACACCGCAGTGGCCCATATTCGGACT
TACGTTACTGCGTGAATCGTTACGATGCGGCTGCACACAAATACCTAGGCAAACCAAGCAACATGCTGAAATGGGGGACC
AAGATCGAGTCCAATGGAGTCATGGACTTGGTGACTGTTGAAGACGCCATCGCCGCATTCGAACGCTACCGCGCTGACTA
CGCACACCACTGA

Upstream 100 bases:

>100_bases
GGCAATCGAACAAAATAGCTCCTTCCCTGTGACCCTCGCAGAATGGCGTCAGGATTTCGTTGGCGTCAAATGCAACCATG
CGTTCAAGTGTAACAATACG

Downstream 100 bases:

>100_bases
ACAGCGAAGAGAAACATTCAAAGCGTCTCGGCTGATCGATAATCCTGATAGGACTTTTCCTCAACATAGGGGGAATCCAA
CGCGAGATTGATCTCCTTTT

Product: glycosyl transferase family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 350; Mature: 350

Protein sequence:

>350_residues
MEQRPYSLCLLRLSALGDITHVLPLVRTLQRERPQARLHWIIDTMGSKLMDGLDGIHFHVYDKHTGLRGMRALRAELTPL
GHFDALLHMQVSLRANLLSAFVPAQRRIGYDHNRSKDLHGLFINERIPDNPGIHVLDAIGSFCEPLGLVQREVRWDLPVS
EEARAWAWAQWNNDGRPVLMISPCSSHTHRNWQAKRYAAVAEHASAQGWRIVLCGGRSTLERQTADTILAQTQVPLLDMV
GKDTLKQLPALLERADLVMTPDSGPMHIANALGKKVLGLHAASNPHRSGPYSDLRYCVNRYDAAAHKYLGKPSNMLKWGT
KIESNGVMDLVTVEDAIAAFERYRADYAHH

Sequences:

>Translated_350_residues
MEQRPYSLCLLRLSALGDITHVLPLVRTLQRERPQARLHWIIDTMGSKLMDGLDGIHFHVYDKHTGLRGMRALRAELTPL
GHFDALLHMQVSLRANLLSAFVPAQRRIGYDHNRSKDLHGLFINERIPDNPGIHVLDAIGSFCEPLGLVQREVRWDLPVS
EEARAWAWAQWNNDGRPVLMISPCSSHTHRNWQAKRYAAVAEHASAQGWRIVLCGGRSTLERQTADTILAQTQVPLLDMV
GKDTLKQLPALLERADLVMTPDSGPMHIANALGKKVLGLHAASNPHRSGPYSDLRYCVNRYDAAAHKYLGKPSNMLKWGT
KIESNGVMDLVTVEDAIAAFERYRADYAHH
>Mature_350_residues
MEQRPYSLCLLRLSALGDITHVLPLVRTLQRERPQARLHWIIDTMGSKLMDGLDGIHFHVYDKHTGLRGMRALRAELTPL
GHFDALLHMQVSLRANLLSAFVPAQRRIGYDHNRSKDLHGLFINERIPDNPGIHVLDAIGSFCEPLGLVQREVRWDLPVS
EEARAWAWAQWNNDGRPVLMISPCSSHTHRNWQAKRYAAVAEHASAQGWRIVLCGGRSTLERQTADTILAQTQVPLLDMV
GKDTLKQLPALLERADLVMTPDSGPMHIANALGKKVLGLHAASNPHRSGPYSDLRYCVNRYDAAAHKYLGKPSNMLKWGT
KIESNGVMDLVTVEDAIAAFERYRADYAHH

Specific function: Lipopolysaccharide core biosynthesis. [C]

COG id: COG0859

COG function: function code M; ADP-heptose:LPS heptosyltransferase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the glycosyltransferase 9 family [H]

Homologues:

Organism=Escherichia coli, GI1790062, Length=346, Percent_Identity=23.6994219653179, Blast_Score=69, Evalue=4e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002201 [H]

Pfam domain/function: PF01075 Glyco_transf_9 [H]

EC number: 2.-.-.- [C]

Molecular weight: Translated: 39364; Mature: 39364

Theoretical pI: Translated: 8.92; Mature: 8.92

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
4.6 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
4.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEQRPYSLCLLRLSALGDITHVLPLVRTLQRERPQARLHWIIDTMGSKLMDGLDGIHFHV
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCEEEE
YDKHTGLRGMRALRAELTPLGHFDALLHMQVSLRANLLSAFVPAQRRIGYDHNRSKDLHG
EECCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCE
LFINERIPDNPGIHVLDAIGSFCEPLGLVQREVRWDLPVSEEARAWAWAQWNNDGRPVLM
EEEECCCCCCCCEEHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEEECCCCCEEEE
ISPCSSHTHRNWQAKRYAAVAEHASAQGWRIVLCGGRSTLERQTADTILAQTQVPLLDMV
EECCCCCCCCCCHHHHHHHHHHHCCCCCCEEEEECCCCHHHHHHHHHHHHHCCCCHHHHH
GKDTLKQLPALLERADLVMTPDSGPMHIANALGKKVLGLHAASNPHRSGPYSDLRYCVNR
CHHHHHHHHHHHHHCCEEECCCCCCHHHHHHHHHHHHEEECCCCCCCCCCHHHHHHHHHH
YDAAAHKYLGKPSNMLKWGTKIESNGVMDLVTVEDAIAAFERYRADYAHH
HHHHHHHHCCCCCHHHHCCCEECCCCCEEEEEHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MEQRPYSLCLLRLSALGDITHVLPLVRTLQRERPQARLHWIIDTMGSKLMDGLDGIHFHV
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCEEEE
YDKHTGLRGMRALRAELTPLGHFDALLHMQVSLRANLLSAFVPAQRRIGYDHNRSKDLHG
EECCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCE
LFINERIPDNPGIHVLDAIGSFCEPLGLVQREVRWDLPVSEEARAWAWAQWNNDGRPVLM
EEEECCCCCCCCEEHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEEECCCCCEEEE
ISPCSSHTHRNWQAKRYAAVAEHASAQGWRIVLCGGRSTLERQTADTILAQTQVPLLDMV
EECCCCCCCCCCHHHHHHHHHHHCCCCCCEEEEECCCCHHHHHHHHHHHHHCCCCHHHHH
GKDTLKQLPALLERADLVMTPDSGPMHIANALGKKVLGLHAASNPHRSGPYSDLRYCVNR
CHHHHHHHHHHHHHCCEEECCCCCCHHHHHHHHHHHHEEECCCCCCCCCCHHHHHHHHHH
YDAAAHKYLGKPSNMLKWGTKIESNGVMDLVTVEDAIAAFERYRADYAHH
HHHHHHHHCCCCCHHHHCCCEECCCCCEEEEEHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: Glycosyltransferases; Transferring other glycosyl groups [C]

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]