| Definition | Xylella fastidiosa M23 chromosome, complete genome. |
|---|---|
| Accession | NC_010577 |
| Length | 2,535,690 |
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The map label for this gene is pstA [H]
Identifier: 182681819
GI number: 182681819
Start: 1415895
End: 1416758
Strand: Direct
Name: pstA [H]
Synonym: XfasM23_1284
Alternate gene names: 182681819
Gene position: 1415895-1416758 (Clockwise)
Preceding gene: 182681818
Following gene: 182681820
Centisome position: 55.84
GC content: 51.04
Gene sequence:
>864_bases ATGTCCACAGCATCGCAACATCTGTACAAGCGCCGCCGACTGATCAATGCTGCCGCCATCACGATCTCTTGTATCGCCGC ACTGTTCGGCCTTTTCTTCCTTATTTGGATTTTGTGGACTCTCATCAGTAAAGGACTCCCCGGGATCGATCTAGATTTAT TCACTAAAATAACACCGCCACCCATGCAGAAAGGTGGCCTAGCTAATGCGTTCTTAGGTAGTGCAATCATGTGCCTGCTT GCAATCGTCATCGGTACACCTGTAGGCATCGCTGCCGGCACTTGGTTGGCTGAATATGGCAACACATCCCAAACAAGCAC AGTCGTTCGCTTCGTAAACGACATCCTACTGTCAGCGCCATCCATCGTGCTCGGCCTGTTTGTCTACACTCTCTACGTGA TGCACACCGGCGGGCACTTCTCCGCATTTTCTGGTGCCCTGGCACTAGTTTTCATCGTACTTCCGATCGTCGTACGCACC ACCGATGAGATGCTGCGTTTGGTACCAGGACAAATGCGTGAAGCAGCACTATCACTAGGTATCCCACAATGGAAGATGAT CACACAAGTGTTATACCGCAGCGCATCGGCCGGCATTCTCACTGGCATTCTGCTAGCACTGGCACGTATCAGTGGTGAAA CCGCACCTCTACTCTTTACAGCCTTTGGCAATCAATATTGGAGCAGCAATATCTTCCAGCCCATTGCCTCGTTGCCCCTG GTGATGAACCAATTCGCCAGCAGCCCATACAAATCCTGGCAATTATTGGCATGGTCTGGTGCATTGGTACTCACGGTATT CGTTCTTCTGGTTAGCCTGGGTGCACGTGCACTATTGCTGCGCAACAAGATACCCAACACATGA
Upstream 100 bases:
>100_bases CATTGCTCTTGCTCGGCTTCGTACTTTTTATCGTTACCTTCGCCGTATTGGTGATCGCTCGCCTCATGTTACTGCGTCTA TCACGAAAGGAGGGCAACTG
Downstream 100 bases:
>100_bases ATTTTTCTCGAGCACCTTTCATGAATGACCTCCACAACGCATTGCCGATACAACGCATTGCCATCACGGCCTCTGCAAAT GCGCCACTTACGACAACCCC
Product: phosphate ABC transporter inner membrane protein PstA
Products: ADP; phosphate [Cytoplasm]; phosphate [Cytoplasm] [C]
Alternate protein names: NA
Number of amino acids: Translated: 287; Mature: 286
Protein sequence:
>287_residues MSTASQHLYKRRRLINAAAITISCIAALFGLFFLIWILWTLISKGLPGIDLDLFTKITPPPMQKGGLANAFLGSAIMCLL AIVIGTPVGIAAGTWLAEYGNTSQTSTVVRFVNDILLSAPSIVLGLFVYTLYVMHTGGHFSAFSGALALVFIVLPIVVRT TDEMLRLVPGQMREAALSLGIPQWKMITQVLYRSASAGILTGILLALARISGETAPLLFTAFGNQYWSSNIFQPIASLPL VMNQFASSPYKSWQLLAWSGALVLTVFVLLVSLGARALLLRNKIPNT
Sequences:
>Translated_287_residues MSTASQHLYKRRRLINAAAITISCIAALFGLFFLIWILWTLISKGLPGIDLDLFTKITPPPMQKGGLANAFLGSAIMCLL AIVIGTPVGIAAGTWLAEYGNTSQTSTVVRFVNDILLSAPSIVLGLFVYTLYVMHTGGHFSAFSGALALVFIVLPIVVRT TDEMLRLVPGQMREAALSLGIPQWKMITQVLYRSASAGILTGILLALARISGETAPLLFTAFGNQYWSSNIFQPIASLPL VMNQFASSPYKSWQLLAWSGALVLTVFVLLVSLGARALLLRNKIPNT >Mature_286_residues STASQHLYKRRRLINAAAITISCIAALFGLFFLIWILWTLISKGLPGIDLDLFTKITPPPMQKGGLANAFLGSAIMCLLA IVIGTPVGIAAGTWLAEYGNTSQTSTVVRFVNDILLSAPSIVLGLFVYTLYVMHTGGHFSAFSGALALVFIVLPIVVRTT DEMLRLVPGQMREAALSLGIPQWKMITQVLYRSASAGILTGILLALARISGETAPLLFTAFGNQYWSSNIFQPIASLPLV MNQFASSPYKSWQLLAWSGALVLTVFVLLVSLGARALLLRNKIPNT
Specific function: Part of a binding-protein-dependent transport system for phosphate; probably responsible for the translocation of the substrate across the membrane [H]
COG id: COG0581
COG function: function code P; ABC-type phosphate transport system, permease component
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 ABC transmembrane type-1 domain [H]
Homologues:
Organism=Escherichia coli, GI1790163, Length=284, Percent_Identity=53.169014084507, Blast_Score=306, Evalue=1e-84,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000515 - InterPro: IPR005672 [H]
Pfam domain/function: PF00528 BPD_transp_1 [H]
EC number: NA
Molecular weight: Translated: 31000; Mature: 30869
Theoretical pI: Translated: 10.44; Mature: 10.44
Prosite motif: PS50928 ABC_TM1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSTASQHLYKRRRLINAAAITISCIAALFGLFFLIWILWTLISKGLPGIDLDLFTKITPP CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHCCCCC PMQKGGLANAFLGSAIMCLLAIVIGTPVGIAAGTWLAEYGNTSQTSTVVRFVNDILLSAP CCCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCH SIVLGLFVYTLYVMHTGGHFSAFSGALALVFIVLPIVVRTTDEMLRLVPGQMREAALSLG HHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCC IPQWKMITQVLYRSASAGILTGILLALARISGETAPLLFTAFGNQYWSSNIFQPIASLPL CCHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCEEHHHHCCHHHHHHHHHHHHHHHH VMNQFASSPYKSWQLLAWSGALVLTVFVLLVSLGARALLLRNKIPNT HHHHHHCCCCCCCCHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCCC >Mature Secondary Structure STASQHLYKRRRLINAAAITISCIAALFGLFFLIWILWTLISKGLPGIDLDLFTKITPP CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHCCCCC PMQKGGLANAFLGSAIMCLLAIVIGTPVGIAAGTWLAEYGNTSQTSTVVRFVNDILLSAP CCCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCH SIVLGLFVYTLYVMHTGGHFSAFSGALALVFIVLPIVVRTTDEMLRLVPGQMREAALSLG HHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCC IPQWKMITQVLYRSASAGILTGILLALARISGETAPLLFTAFGNQYWSSNIFQPIASLPL CCHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCEEHHHHCCHHHHHHHHHHHHHHHH VMNQFASSPYKSWQLLAWSGALVLTVFVLLVSLGARALLLRNKIPNT HHHHHHCCCCCCCCHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: ATP; phosphate [Periplasm]; H2O [C]
Specific reaction: ATP + phosphate [Periplasm] + H2O = ADP + phosphate [Cytoplasm] + phosphate [Cytoplasm] [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 10910347 [H]