| Definition | Xylella fastidiosa M23 chromosome, complete genome. |
|---|---|
| Accession | NC_010577 |
| Length | 2,535,690 |
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The map label for this gene is flp [H]
Identifier: 182681772
GI number: 182681772
Start: 1366155
End: 1367522
Strand: Direct
Name: flp [H]
Synonym: XfasM23_1230
Alternate gene names: 182681772
Gene position: 1366155-1367522 (Clockwise)
Preceding gene: 182681766
Following gene: 182681774
Centisome position: 53.88
GC content: 52.7
Gene sequence:
>1368_bases ATGAAGCAACAGGGCTGGCACCGGAATTTGCGTCTAATTGTAACTGGACTACTGGGCAGCTTAATGCCCTTCACTCTCAG TTCCACAGATCAAACTCCAGTCCTCAAGCCGCAGTCGTTACCGCTGATCACTAGCTCAGACGACACACAAGACAAGGTGG CACTGCTGACGCACCGTTTCGATATCAAAGCAATCGAATCGATGGCCGAGCAACTGACCTATGGCCAAAAAGTCCCGGGG TTGGCAATGGCAATTGTCCAAGGGGGGCACATCCTTAGCATGCGCGGCTATGGAGTTAACGATGTCAGCAACCCGCAGCC TGTGAATGCACACACCGTTTTTCGCCTTGCTTCACTTTCCAAAGCCTTTGCCAGCGCCATGACCGGTTTACTTGTCAACG ATGGCATCCTCAGTTGGAACAGCAAGATTGTGGATTACGTCCCCGGCTTCCACCTAAGCAACCCAACCGCAACAAACAAA TTGACTGTTGCCGATGTCCTCAGCCATCGCGTCGGCCTGAGCCGCAATGCCTATGACGGCGAAATCGAGTCGAATGCCGA CTATTATTCACTGAATCGCAAACTCGCCTATGCACCACTCATCTGTTCCCCAGGTGAGTGTTACTCCTACCAAAACGTGG CCTTCAGCCTGATCGGCGACGTCGTGTTTGCTGCCTCCGGAGACTTTTATGAACAGGCGGTGGAACGCCGCATCTTTAAG CCATTGGGAATGAATGATGCCAGCCTTGGTCTAGCTGGCATTCGATCCAGTCAAAGTTGGGCACGACCACATACACGTAC CAAAAAGGGATGGAGGCCCGTCGTCGTCAAACAAACGTATTACCACTTAGCACCAGCCGCCGGTGTCAACGCCAGTGCAA GCGATATGGCTCAATGGCTACTGGCACAAACAGGACATAAGCCGGAAGTGCTACCCGCACCATTGCTCGTGACATTACAC ACACCACTTGTCAGCACACCCAGTGAAGTCCGCCCAGGCTGGCGCGAACAACGTTTATTGGCAGCAAGCTACGCATTGGG CTGGCGCCTGTTCAACTACAATGGACACACACTCGTATTCCATGCCGGCGCGGTACAAGGCTACCGCGGTTTAGTCGCAC TGCTACCAGAACGCGATTTTGGGGTGGCCATCTTATGTAATGGTGAAACCGGCCTACCTTCCGGGCTGCTACTCACTATC CTGGACCGGGTACTCGGTCTACGGGGACAACACCGACTGGATCTTGAAACTGATAGCGACTTCAGCAGCGAAAACATGCT AGCTAAGAAATCAACAAACGAATCGAATTCCCAGAGCAGTTTAGAAAACAAACCGTCACCACCACCACCTTCAACGCAAC TACATTAG
Upstream 100 bases:
>100_bases AATGGGATATGAAATTTTTCTAAGTGTGATTTGTGGAACAGGAAAAAGCGACGGTAGAATCCGACCAGTCACAAATCATT GATTACTCTGGAGAGCCACA
Downstream 100 bases:
>100_bases TGTCCCTTTCTTTTCTTGCCACATCCGTTCGAGAAACATCGAGAATCATGATCTGGAACCTATCGAACTTTTTAGACCAT ATTTCAAATGATCTTGAATA
Product: beta-lactamase
Products: A Substituted Beta- Amino Acid. [C]
Alternate protein names: FmtA-like protein [H]
Number of amino acids: Translated: 455; Mature: 455
Protein sequence:
>455_residues MKQQGWHRNLRLIVTGLLGSLMPFTLSSTDQTPVLKPQSLPLITSSDDTQDKVALLTHRFDIKAIESMAEQLTYGQKVPG LAMAIVQGGHILSMRGYGVNDVSNPQPVNAHTVFRLASLSKAFASAMTGLLVNDGILSWNSKIVDYVPGFHLSNPTATNK LTVADVLSHRVGLSRNAYDGEIESNADYYSLNRKLAYAPLICSPGECYSYQNVAFSLIGDVVFAASGDFYEQAVERRIFK PLGMNDASLGLAGIRSSQSWARPHTRTKKGWRPVVVKQTYYHLAPAAGVNASASDMAQWLLAQTGHKPEVLPAPLLVTLH TPLVSTPSEVRPGWREQRLLAASYALGWRLFNYNGHTLVFHAGAVQGYRGLVALLPERDFGVAILCNGETGLPSGLLLTI LDRVLGLRGQHRLDLETDSDFSSENMLAKKSTNESNSQSSLENKPSPPPPSTQLH
Sequences:
>Translated_455_residues MKQQGWHRNLRLIVTGLLGSLMPFTLSSTDQTPVLKPQSLPLITSSDDTQDKVALLTHRFDIKAIESMAEQLTYGQKVPG LAMAIVQGGHILSMRGYGVNDVSNPQPVNAHTVFRLASLSKAFASAMTGLLVNDGILSWNSKIVDYVPGFHLSNPTATNK LTVADVLSHRVGLSRNAYDGEIESNADYYSLNRKLAYAPLICSPGECYSYQNVAFSLIGDVVFAASGDFYEQAVERRIFK PLGMNDASLGLAGIRSSQSWARPHTRTKKGWRPVVVKQTYYHLAPAAGVNASASDMAQWLLAQTGHKPEVLPAPLLVTLH TPLVSTPSEVRPGWREQRLLAASYALGWRLFNYNGHTLVFHAGAVQGYRGLVALLPERDFGVAILCNGETGLPSGLLLTI LDRVLGLRGQHRLDLETDSDFSSENMLAKKSTNESNSQSSLENKPSPPPPSTQLH >Mature_455_residues MKQQGWHRNLRLIVTGLLGSLMPFTLSSTDQTPVLKPQSLPLITSSDDTQDKVALLTHRFDIKAIESMAEQLTYGQKVPG LAMAIVQGGHILSMRGYGVNDVSNPQPVNAHTVFRLASLSKAFASAMTGLLVNDGILSWNSKIVDYVPGFHLSNPTATNK LTVADVLSHRVGLSRNAYDGEIESNADYYSLNRKLAYAPLICSPGECYSYQNVAFSLIGDVVFAASGDFYEQAVERRIFK PLGMNDASLGLAGIRSSQSWARPHTRTKKGWRPVVVKQTYYHLAPAAGVNASASDMAQWLLAQTGHKPEVLPAPLLVTLH TPLVSTPSEVRPGWREQRLLAASYALGWRLFNYNGHTLVFHAGAVQGYRGLVALLPERDFGVAILCNGETGLPSGLLLTI LDRVLGLRGQHRLDLETDSDFSSENMLAKKSTNESNSQSSLENKPSPPPPSTQLH
Specific function: Its precise function is unknown. Has no penicillin- binding activity and is not involved in methicillin resistance [H]
COG id: COG1680
COG function: function code V; Beta-lactamase class C and other penicillin binding proteins
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Escherichia coli, GI1790593, Length=388, Percent_Identity=23.7113402061856, Blast_Score=79, Evalue=6e-16, Organism=Escherichia coli, GI1786574, Length=246, Percent_Identity=26.0162601626016, Blast_Score=75, Evalue=8e-15, Organism=Escherichia coli, GI87082101, Length=284, Percent_Identity=25.7042253521127, Blast_Score=65, Evalue=1e-11, Organism=Caenorhabditis elegans, GI17550934, Length=210, Percent_Identity=27.1428571428571, Blast_Score=77, Evalue=2e-14, Organism=Caenorhabditis elegans, GI115533026, Length=211, Percent_Identity=26.5402843601896, Blast_Score=67, Evalue=2e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR012338 - InterPro: IPR001466 [H]
Pfam domain/function: PF00144 Beta-lactamase [H]
EC number: 3.5.2.6 [C]
Molecular weight: Translated: 49598; Mature: 49598
Theoretical pI: Translated: 8.93; Mature: 8.93
Prosite motif: PS00678 WD_REPEATS_1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKQQGWHRNLRLIVTGLLGSLMPFTLSSTDQTPVLKPQSLPLITSSDDTQDKVALLTHRF CCCCCCCCCHHHHHHHHHHHHCCEEECCCCCCCCCCCCCCCEEECCCCCCHHHHHHHHHC DIKAIESMAEQLTYGQKVPGLAMAIVQGGHILSMRGYGVNDVSNPQPVNAHTVFRLASLS HHHHHHHHHHHHHCCCCCCCCEEHEECCCEEEEECCCCCCCCCCCCCCCHHHHHHHHHHH KAFASAMTGLLVNDGILSWNSKIVDYVPGFHLSNPTATNKLTVADVLSHRVGLSRNAYDG HHHHHHHHHHHHCCCEECCCCCHHHHCCCCCCCCCCCCCEEHHHHHHHHHHCCCCCCCCC EIESNADYYSLNRKLAYAPLICSPGECYSYQNVAFSLIGDVVFAASGDFYEQAVERRIFK CCCCCCCEEECCCEEEECCEEECCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHC PLGMNDASLGLAGIRSSQSWARPHTRTKKGWRPVVVKQTYYHLAPAAGVNASASDMAQWL CCCCCCCCCCHHHCCCCCCCCCCCCCCCCCCCEEEEECHHHHHCCCCCCCCCHHHHHHHH LAQTGHKPEVLPAPLLVTLHTPLVSTPSEVRPGWREQRLLAASYALGWRLFNYNGHTLVF HHHCCCCCCCCCCCEEEEEECCCCCCCHHHCCCHHHHHHHHHHHHHEEEEEECCCCEEEE HAGAVQGYRGLVALLPERDFGVAILCNGETGLPSGLLLTILDRVLGLRGQHRLDLETDSD ECCCCCCCCCEEEECCCCCCCEEEEECCCCCCCCHHHHHHHHHHHCCCCCCEECCCCCCC FSSENMLAKKSTNESNSQSSLENKPSPPPPSTQLH CCCCCEEEECCCCCCCCHHHHCCCCCCCCCCCCCC >Mature Secondary Structure MKQQGWHRNLRLIVTGLLGSLMPFTLSSTDQTPVLKPQSLPLITSSDDTQDKVALLTHRF CCCCCCCCCHHHHHHHHHHHHCCEEECCCCCCCCCCCCCCCEEECCCCCCHHHHHHHHHC DIKAIESMAEQLTYGQKVPGLAMAIVQGGHILSMRGYGVNDVSNPQPVNAHTVFRLASLS HHHHHHHHHHHHHCCCCCCCCEEHEECCCEEEEECCCCCCCCCCCCCCCHHHHHHHHHHH KAFASAMTGLLVNDGILSWNSKIVDYVPGFHLSNPTATNKLTVADVLSHRVGLSRNAYDG HHHHHHHHHHHHCCCEECCCCCHHHHCCCCCCCCCCCCCEEHHHHHHHHHHCCCCCCCCC EIESNADYYSLNRKLAYAPLICSPGECYSYQNVAFSLIGDVVFAASGDFYEQAVERRIFK CCCCCCCEEECCCEEEECCEEECCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHC PLGMNDASLGLAGIRSSQSWARPHTRTKKGWRPVVVKQTYYHLAPAAGVNASASDMAQWL CCCCCCCCCCHHHCCCCCCCCCCCCCCCCCCCEEEEECHHHHHCCCCCCCCCHHHHHHHH LAQTGHKPEVLPAPLLVTLHTPLVSTPSEVRPGWREQRLLAASYALGWRLFNYNGHTLVF HHHCCCCCCCCCCCEEEEEECCCCCCCHHHCCCHHHHHHHHHHHHHEEEEEECCCCEEEE HAGAVQGYRGLVALLPERDFGVAILCNGETGLPSGLLLTILDRVLGLRGQHRLDLETDSD ECCCCCCCCCEEEECCCCCCCEEEEECCCCCCCCHHHHHHHHHHHCCCCCCEECCCCCCC FSSENMLAKKSTNESNSQSSLENKPSPPPPSTQLH CCCCCEEEECCCCCCCCHHHHCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: A Beta-Lactam; H2O [C]
Specific reaction: A Beta-Lactam + H2O = A Substituted Beta- Amino Acid. [C]
General reaction: Carboxylic acid amide hydrolysis [C]
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: NA