| Definition | Xylella fastidiosa M23 chromosome, complete genome. |
|---|---|
| Accession | NC_010577 |
| Length | 2,535,690 |
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The map label for this gene is 182681739
Identifier: 182681739
GI number: 182681739
Start: 1329394
End: 1329858
Strand: Direct
Name: 182681739
Synonym: XfasM23_1197
Alternate gene names: NA
Gene position: 1329394-1329858 (Clockwise)
Preceding gene: 182681738
Following gene: 182681741
Centisome position: 52.43
GC content: 52.26
Gene sequence:
>465_bases ATGAGCACCGCACCCCTCGAAAACGCCCCCACCCCAGAGGGCGTTAGGTTCACCAAAATCTACGACGAACACGGCAAGCA CATCATTACGCGTGATGAGCATAAAGGGCTTGAGTGGTTGGCTGGGTATGTCGGCCCAAGCTCGAATGAATACGGCCCTG ATTGTGTTGCGGTAAAGGAATGTTGCCAATTAAAGATCGGCGGTTATGACGATTGGCGCGTACCTGAACTTAAAGAGCTG AAAACTATTGGGCTACTGGAGGGATATTGGTATTGGGGGGACTCGGGCCTGTTGTTATGGACCTGCACCCCGTGCGAACA AGAACCGAAAGAAAGAGCAACGGTCTTTAAATTCGGTGTCCATTACAGCTTTGTAGCATCGCGTTCGGATAAGTATCCCG TCCGCGCTGTCCGTGGCCAGATGCGTACTGACGCCATTGCTACACCAAAGGCAGGTGAGTCATGA
Upstream 100 bases:
>100_bases ATCCGCAATATGAGCAAGTCCGTGCCGCTTACAAAGATGCCGTTTTTATGTCATGCCACGCCGTTAGCGGCGCGCACACC GATAGCGATGAGGTGGCCGC
Downstream 100 bases:
>100_bases CTGGCATTGGATATAGCAGCTACAGCGACCCACGCCTGCAACCGCATAAAAAGGATTCAGGCAATTTTATCCAACACGCG CTCAACACGTGTAAGCGGTT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 154; Mature: 153
Protein sequence:
>154_residues MSTAPLENAPTPEGVRFTKIYDEHGKHIITRDEHKGLEWLAGYVGPSSNEYGPDCVAVKECCQLKIGGYDDWRVPELKEL KTIGLLEGYWYWGDSGLLLWTCTPCEQEPKERATVFKFGVHYSFVASRSDKYPVRAVRGQMRTDAIATPKAGES
Sequences:
>Translated_154_residues MSTAPLENAPTPEGVRFTKIYDEHGKHIITRDEHKGLEWLAGYVGPSSNEYGPDCVAVKECCQLKIGGYDDWRVPELKEL KTIGLLEGYWYWGDSGLLLWTCTPCEQEPKERATVFKFGVHYSFVASRSDKYPVRAVRGQMRTDAIATPKAGES >Mature_153_residues STAPLENAPTPEGVRFTKIYDEHGKHIITRDEHKGLEWLAGYVGPSSNEYGPDCVAVKECCQLKIGGYDDWRVPELKELK TIGLLEGYWYWGDSGLLLWTCTPCEQEPKERATVFKFGVHYSFVASRSDKYPVRAVRGQMRTDAIATPKAGES
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 17331; Mature: 17200
Theoretical pI: Translated: 6.11; Mature: 6.11
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.2 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 4.5 %Cys+Met (Translated Protein) 3.3 %Cys (Mature Protein) 0.7 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSTAPLENAPTPEGVRFTKIYDEHGKHIITRDEHKGLEWLAGYVGPSSNEYGPDCVAVKE CCCCCCCCCCCCCCEEEEEEECCCCCEEEECCCCCCHHHHHHHCCCCCCCCCCCHHHHHH CCQLKIGGYDDWRVPELKELKTIGLLEGYWYWGDSGLLLWTCTPCEQEPKERATVFKFGV HHCEECCCCCCCCCCCHHHHHHHCCEECEEEECCCCEEEEEECCCCCCCHHHHEEEEECC HYSFVASRSDKYPVRAVRGQMRTDAIATPKAGES EEEEEECCCCCCCHHHHHCCCCCCCCCCCCCCCC >Mature Secondary Structure STAPLENAPTPEGVRFTKIYDEHGKHIITRDEHKGLEWLAGYVGPSSNEYGPDCVAVKE CCCCCCCCCCCCCEEEEEEECCCCCEEEECCCCCCHHHHHHHCCCCCCCCCCCHHHHHH CCQLKIGGYDDWRVPELKELKTIGLLEGYWYWGDSGLLLWTCTPCEQEPKERATVFKFGV HHCEECCCCCCCCCCCHHHHHHHCCEECEEEECCCCEEEEEECCCCCCCHHHHEEEEECC HYSFVASRSDKYPVRAVRGQMRTDAIATPKAGES EEEEEECCCCCCCHHHHHCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA