Definition | Xylella fastidiosa M23 chromosome, complete genome. |
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Accession | NC_010577 |
Length | 2,535,690 |
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The map label for this gene is 182681644
Identifier: 182681644
GI number: 182681644
Start: 1247802
End: 1248470
Strand: Direct
Name: 182681644
Synonym: XfasM23_1102
Alternate gene names: NA
Gene position: 1247802-1248470 (Clockwise)
Preceding gene: 182681643
Following gene: 182681645
Centisome position: 49.21
GC content: 50.52
Gene sequence:
>669_bases ATGGCTATGCCTAATCCAGTACTCCCCAACACGTCCGGCACTCTATTTTTAGAAGGTCCAGTGGGTTGCCTTGAAGTTGC AGTGGACTTTCCAGCGTTCAATGTCACTACACAGTCACCTGTTGCGATTATTTGCCATCCGCTCTCTACCGAGGGAGGGA GCATGGATAACAAAGTTGTCACCATGACTGCACGCGCATTGCGTGAATTAGGCATGATGACTGTGCGCTTTAATTTCCGT AGTGTTGGTGCCTCAGATGGCATGTTTGATAACGGCCATGGTGAACGCGAGGACTTGCGTGCAATAGCGGCTTGGGTACG TGCACAGCGACCTGACAGTACATTGTGGTTAGCCGGTTTCAGCTTTGGAGCTTACATATCGTTGCTTGTTGCTGAAGAAT TGGAAACGCAAGTGTTGATTTCAATCTCACCACCAGCTGGGCGCTGGGACCTCAGTCACGTACACCCCCCTGAACATTGG CTGTTAATCCAAGGTGATGCTGACGAAGTTGTTGACCCTCAAGCTGTCTATGACTGGATCTCCACATTACCGCGTCAGCC TAAACTGATACGCATGCCTGAGACCAGCCACTTTTTTCACCGCAAGTTGATTCATTTACGCGATGCCATCCAAGATGGTG TGCGCAGCTGGCTACCACAGCTGGCATAG
Upstream 100 bases:
>100_bases TCCATGAAACACTCCTTATGCTGTAATAGTGTCGTAACAGTGCACTCACCCTGACCTGGGCTATATCAATGATGAAGGTA GACCGTAAGGCGGCTATCAT
Downstream 100 bases:
>100_bases ATTTATAAGGACGTTGCACATACTGCAGCTATAGGATTTGATGTGACCGAAATGACTCCCTCACAACGCTATGCCGCCGG CGTCGAACGTGGCCATTGGA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 222; Mature: 221
Protein sequence:
>222_residues MAMPNPVLPNTSGTLFLEGPVGCLEVAVDFPAFNVTTQSPVAIICHPLSTEGGSMDNKVVTMTARALRELGMMTVRFNFR SVGASDGMFDNGHGEREDLRAIAAWVRAQRPDSTLWLAGFSFGAYISLLVAEELETQVLISISPPAGRWDLSHVHPPEHW LLIQGDADEVVDPQAVYDWISTLPRQPKLIRMPETSHFFHRKLIHLRDAIQDGVRSWLPQLA
Sequences:
>Translated_222_residues MAMPNPVLPNTSGTLFLEGPVGCLEVAVDFPAFNVTTQSPVAIICHPLSTEGGSMDNKVVTMTARALRELGMMTVRFNFR SVGASDGMFDNGHGEREDLRAIAAWVRAQRPDSTLWLAGFSFGAYISLLVAEELETQVLISISPPAGRWDLSHVHPPEHW LLIQGDADEVVDPQAVYDWISTLPRQPKLIRMPETSHFFHRKLIHLRDAIQDGVRSWLPQLA >Mature_221_residues AMPNPVLPNTSGTLFLEGPVGCLEVAVDFPAFNVTTQSPVAIICHPLSTEGGSMDNKVVTMTARALRELGMMTVRFNFRS VGASDGMFDNGHGEREDLRAIAAWVRAQRPDSTLWLAGFSFGAYISLLVAEELETQVLISISPPAGRWDLSHVHPPEHWL LIQGDADEVVDPQAVYDWISTLPRQPKLIRMPETSHFFHRKLIHLRDAIQDGVRSWLPQLA
Specific function: Unknown
COG id: COG2945
COG function: function code R; Predicted hydrolase of the alpha/beta superfamily
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000383 [H]
Pfam domain/function: PF02129 Peptidase_S15 [H]
EC number: NA
Molecular weight: Translated: 24621; Mature: 24490
Theoretical pI: Translated: 5.52; Mature: 5.52
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 3.6 %Met (Translated Protein) 4.5 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 3.2 %Met (Mature Protein) 4.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAMPNPVLPNTSGTLFLEGPVGCLEVAVDFPAFNVTTQSPVAIICHPLSTEGGSMDNKVV CCCCCCCCCCCCCEEEEECCCCEEEEEEECCCEECCCCCCEEEEEEECCCCCCCCCCEEE TMTARALRELGMMTVRFNFRSVGASDGMFDNGHGEREDLRAIAAWVRAQRPDSTLWLAGF HHHHHHHHHCCEEEEEEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCEEEEEEC SFGAYISLLVAEELETQVLISISPPAGRWDLSHVHPPEHWLLIQGDADEVVDPQAVYDWI CHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCCCCCCEEEEECCCCHHCCHHHHHHHH STLPRQPKLIRMPETSHFFHRKLIHLRDAIQDGVRSWLPQLA HHCCCCCCEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure AMPNPVLPNTSGTLFLEGPVGCLEVAVDFPAFNVTTQSPVAIICHPLSTEGGSMDNKVV CCCCCCCCCCCCEEEEECCCCEEEEEEECCCEECCCCCCEEEEEEECCCCCCCCCCEEE TMTARALRELGMMTVRFNFRSVGASDGMFDNGHGEREDLRAIAAWVRAQRPDSTLWLAGF HHHHHHHHHCCEEEEEEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCEEEEEEC SFGAYISLLVAEELETQVLISISPPAGRWDLSHVHPPEHWLLIQGDADEVVDPQAVYDWI CHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCCCCCCEEEEECCCCHHCCHHHHHHHH STLPRQPKLIRMPETSHFFHRKLIHLRDAIQDGVRSWLPQLA HHCCCCCCEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9823893 [H]