| Definition | Xylella fastidiosa M23 chromosome, complete genome. |
|---|---|
| Accession | NC_010577 |
| Length | 2,535,690 |
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The map label for this gene is cvpA [C]
Identifier: 182681449
GI number: 182681449
Start: 1069548
End: 1070201
Strand: Reverse
Name: cvpA [C]
Synonym: XfasM23_0900
Alternate gene names: 182681449
Gene position: 1070201-1069548 (Counterclockwise)
Preceding gene: 182681450
Following gene: 182681448
Centisome position: 42.21
GC content: 46.48
Gene sequence:
>654_bases ATGATTGATCTGATCCTAGCCATCATCATCTTGGTTTCCGCATTATTGGGCCTATTACGTGGCTTTGTCAGCATTATAAT AAGTACCTCCTCCTGGCTACTGGCCAGCTGGGCGACATTTGAGTTTGGCAATACAGCGAGTCATTGGCTAGCAAGCCATG GTATTCCATCGACTACTGAAATATTGTGTGGTTATGCGTTGGTGTTCATCGGGACTTTGATGACAGTTGGCGCAGTGGGT ATGCTGATGCACGCTGGGATCAACGCAATACGTTTAAACAACATAGACCGCATATTCGGCTTTGCCTTAGGGACGTTTCG TGGCGGCTTCATTGCTTGCTTACTGTTACTGATGATTGGCTACACTCCATTGGCGCATGAACCTGTTTGGCGCAACTCGC GATTGGTACCATTACTACAACCTGGAGTCTCATGGATGCGTGCTAAGTTACCGCAGCGTTCATCTCCATTAACACCGCAG CGGTTGCCATTGACAAGGCCAATGATAAACAGGATGGGTTCAATCAACATATCAGTATCAGACGATAATCAACTGATCAG CCGTGTATTCCCCCCTTTGTCTAGTAATGAACACGATAAATCGCATTACGTCCCAGTCCAACCTATCATCTACAAGCCAA CAACCACTTATTAG
Upstream 100 bases:
>100_bases GCATGGTACGGTCACACCCTTGATTACCAATGTCCCTACAACTCCATGAAAGGCATTCGTACATGATCGGCTACAGTTCA CCGTTATTAAAGCTGCCGCG
Downstream 100 bases:
>100_bases TAACTATATGTACACTGGAGAACATAATCTCCTGAAAATCTAAAGTTCACGGCCCAGCACCTACAAACTCACAGTAATGC AGTCCCAAGAAGCTGCAGCG
Product: colicin V production protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 217; Mature: 217
Protein sequence:
>217_residues MIDLILAIIILVSALLGLLRGFVSIIISTSSWLLASWATFEFGNTASHWLASHGIPSTTEILCGYALVFIGTLMTVGAVG MLMHAGINAIRLNNIDRIFGFALGTFRGGFIACLLLLMIGYTPLAHEPVWRNSRLVPLLQPGVSWMRAKLPQRSSPLTPQ RLPLTRPMINRMGSINISVSDDNQLISRVFPPLSSNEHDKSHYVPVQPIIYKPTTTY
Sequences:
>Translated_217_residues MIDLILAIIILVSALLGLLRGFVSIIISTSSWLLASWATFEFGNTASHWLASHGIPSTTEILCGYALVFIGTLMTVGAVG MLMHAGINAIRLNNIDRIFGFALGTFRGGFIACLLLLMIGYTPLAHEPVWRNSRLVPLLQPGVSWMRAKLPQRSSPLTPQ RLPLTRPMINRMGSINISVSDDNQLISRVFPPLSSNEHDKSHYVPVQPIIYKPTTTY >Mature_217_residues MIDLILAIIILVSALLGLLRGFVSIIISTSSWLLASWATFEFGNTASHWLASHGIPSTTEILCGYALVFIGTLMTVGAVG MLMHAGINAIRLNNIDRIFGFALGTFRGGFIACLLLLMIGYTPLAHEPVWRNSRLVPLLQPGVSWMRAKLPQRSSPLTPQ RLPLTRPMINRMGSINISVSDDNQLISRVFPPLSSNEHDKSHYVPVQPIIYKPTTTY
Specific function: Required For Colicin V Production From Plasmid Incfi Colv3-K30. [C]
COG id: COG1286
COG function: function code R; Uncharacterized membrane protein, required for colicin V production
Gene ontology:
Cell location: Integral Membrane Protein [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 23896; Mature: 23896
Theoretical pI: Translated: 10.11; Mature: 10.11
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 3.7 %Met (Translated Protein) 4.6 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 3.7 %Met (Mature Protein) 4.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIDLILAIIILVSALLGLLRGFVSIIISTSSWLLASWATFEFGNTASHWLASHGIPSTTE CHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCHHHHHHHCCCCHHHH ILCGYALVFIGTLMTVGAVGMLMHAGINAIRLNNIDRIFGFALGTFRGGFIACLLLLMIG HHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCHHHHHHHHHHHHCHHHHHHHHHHHHC YTPLAHEPVWRNSRLVPLLQPGVSWMRAKLPQRSSPLTPQRLPLTRPMINRMGSINISVS CCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHCCCCEEEEEC DDNQLISRVFPPLSSNEHDKSHYVPVQPIIYKPTTTY CHHHHHHHHCCCCCCCCCCCCCCCCCCCEEECCCCCC >Mature Secondary Structure MIDLILAIIILVSALLGLLRGFVSIIISTSSWLLASWATFEFGNTASHWLASHGIPSTTE CHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCHHHHHHHCCCCHHHH ILCGYALVFIGTLMTVGAVGMLMHAGINAIRLNNIDRIFGFALGTFRGGFIACLLLLMIG HHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCHHHHHHHHHHHHCHHHHHHHHHHHHC YTPLAHEPVWRNSRLVPLLQPGVSWMRAKLPQRSSPLTPQRLPLTRPMINRMGSINISVS CCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHCCCCEEEEEC DDNQLISRVFPPLSSNEHDKSHYVPVQPIIYKPTTTY CHHHHHHHHCCCCCCCCCCCCCCCCCCCEEECCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: NA