Click here to switch to the map view.

The map label for this gene is 182681361

Identifier: 182681361

GI number: 182681361

Start: 955886

End: 956905

Strand: Reverse

Name: 182681361

Synonym: XfasM23_0808

Alternate gene names: NA

Gene position: 956905-955886 (Counterclockwise)

Preceding gene: 182681362

Following gene: 182681358

Centisome position: 37.74

GC content: 54.41

Gene sequence:

>1020_bases
ATGGGACGTAAGCCAATCAAAGCAGGTGCGATTCCGAGGTTTCGCGTGCGCCCTCAGAAGTCCGGCGTGGTGTATTACTA
CTACGATCATGGCGGCAAGCCACGCAAAGAGACGCCACTGGGACGCGACTACGGGTTAGCCATCAAGCGGTGGGCTGAGC
TGGAGCATGCGCAGATCACTCCTGCCATTGCGGTGACGTTCCGCCATGTGGCCGAGCGTTACCGCGCTGAGGTGACCCCG
ACAAAGGCGTATAACACCCAGCGCGTGGAGCATCGTTGTTTGGCTCCACTCCTGAAGTTTTTTGATGACCCACCCGCGCC
GTTTGAGGCTATTAAACCAGTGAATATCCGTCAGTATCTGGATTGGCGCACCTCTAAGGTGATCGCCAATCGTGAGGTGT
CCGTGTTTTCGCATCTTTGGAATTGGGCGCGGAGTAAGGGAATTACTGATCTTCCTAACCCTTGTGGGGGCATCCGGCGT
AATAAGGCGACAGGTCGCGATGTATATGTAGACGATACGACGTACCGCGCTGTGTACCAGGCAGCGGACCAAACGCTCAG
GGATGCGATGGACCTCGCCTATCTGACGGGGCAGCGTGTGAGTGATGTTGTGTCTATGGATGAGCGCCATATTGTTAATG
GCGCTTTGGAGATTTGCCAAGCTAAAACGGGAGTGAAATTGGCGATTGCGATTACGGGTGAATTGGCAGTTTTAATAAAG
CGTATTTTTGATCGCAAGCGGGGGATGAAGCTGCGTAGTACACGTTTGATTGTGGATGAAAAAGGCTTGGGGTTGAATTG
GAAAAAATTAGCTTACAGGTTTAGGAAAGTACGCGCTGCCGCAGGGATCGCCAAGGAGGTATTTCAATTCCGCGATCTAC
GCGCCAAAGCGGCGACCGATAAGGCAGATTTGGCGGGGGACATCCGCCAAGCACAAGCACAATTAGGGCATGCGTCGGTG
ACGATGACGGAGCACTATGTACGCAAGCGCAGGGGGGCGAAGGTGACGCCGACGCGGTGA

Upstream 100 bases:

>100_bases
TGGATGCGTATGACTGGCCGGTCGTGCTGCGTGCTTCGATTGAAGAGATACCGACGACTCCCATCGTTGCGCCTGTTTGG
AAGTCTAATAAGGTCGCTTG

Downstream 100 bases:

>100_bases
ATTGCGGAGCATTGCTAATATTGCGGAGCGGGCATATTTTTTAATTCATTGATTATATTAGATATTCATGCATTAATTGG
GTCGATTATTGATGCAACAT

Product: integrase family protein

Products: NA

Alternate protein names: Phage-Related Integrase; Phage Integrase; Integrase; Integrase Family Protein; Site-Specific Recombinase Phage Integrase Family; Phage Integrase Family Site Specific Recombinase; Integrase/Recombinase; Integrase Prophage; Integrase Protein; Site-Specific Recombinase; Phage IntegrasePhage Integrase N-Terminal SAM-Like

Number of amino acids: Translated: 339; Mature: 338

Protein sequence:

>339_residues
MGRKPIKAGAIPRFRVRPQKSGVVYYYYDHGGKPRKETPLGRDYGLAIKRWAELEHAQITPAIAVTFRHVAERYRAEVTP
TKAYNTQRVEHRCLAPLLKFFDDPPAPFEAIKPVNIRQYLDWRTSKVIANREVSVFSHLWNWARSKGITDLPNPCGGIRR
NKATGRDVYVDDTTYRAVYQAADQTLRDAMDLAYLTGQRVSDVVSMDERHIVNGALEICQAKTGVKLAIAITGELAVLIK
RIFDRKRGMKLRSTRLIVDEKGLGLNWKKLAYRFRKVRAAAGIAKEVFQFRDLRAKAATDKADLAGDIRQAQAQLGHASV
TMTEHYVRKRRGAKVTPTR

Sequences:

>Translated_339_residues
MGRKPIKAGAIPRFRVRPQKSGVVYYYYDHGGKPRKETPLGRDYGLAIKRWAELEHAQITPAIAVTFRHVAERYRAEVTP
TKAYNTQRVEHRCLAPLLKFFDDPPAPFEAIKPVNIRQYLDWRTSKVIANREVSVFSHLWNWARSKGITDLPNPCGGIRR
NKATGRDVYVDDTTYRAVYQAADQTLRDAMDLAYLTGQRVSDVVSMDERHIVNGALEICQAKTGVKLAIAITGELAVLIK
RIFDRKRGMKLRSTRLIVDEKGLGLNWKKLAYRFRKVRAAAGIAKEVFQFRDLRAKAATDKADLAGDIRQAQAQLGHASV
TMTEHYVRKRRGAKVTPTR
>Mature_338_residues
GRKPIKAGAIPRFRVRPQKSGVVYYYYDHGGKPRKETPLGRDYGLAIKRWAELEHAQITPAIAVTFRHVAERYRAEVTPT
KAYNTQRVEHRCLAPLLKFFDDPPAPFEAIKPVNIRQYLDWRTSKVIANREVSVFSHLWNWARSKGITDLPNPCGGIRRN
KATGRDVYVDDTTYRAVYQAADQTLRDAMDLAYLTGQRVSDVVSMDERHIVNGALEICQAKTGVKLAIAITGELAVLIKR
IFDRKRGMKLRSTRLIVDEKGLGLNWKKLAYRFRKVRAAAGIAKEVFQFRDLRAKAATDKADLAGDIRQAQAQLGHASVT
MTEHYVRKRRGAKVTPTR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 38501; Mature: 38370

Theoretical pI: Translated: 10.83; Mature: 10.83

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGRKPIKAGAIPRFRVRPQKSGVVYYYYDHGGKPRKETPLGRDYGLAIKRWAELEHAQIT
CCCCCCCCCCCCCEEECCCCCCEEEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCC
PAIAVTFRHVAERYRAEVTPTKAYNTQRVEHRCLAPLLKFFDDPPAPFEAIKPVNIRQYL
HHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCHHHCCCCCHHHHH
DWRTSKVIANREVSVFSHLWNWARSKGITDLPNPCGGIRRNKATGRDVYVDDTTYRAVYQ
HHHHHHHHHCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCEEEECCHHHHHHHH
AADQTLRDAMDLAYLTGQRVSDVVSMDERHIVNGALEICQAKTGVKLAIAITGELAVLIK
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCHHHHHHH
RIFDRKRGMKLRSTRLIVDEKGLGLNWKKLAYRFRKVRAAAGIAKEVFQFRDLRAKAATD
HHHHHHCCCEEEEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
KADLAGDIRQAQAQLGHASVTMTEHYVRKRRGAKVTPTR
HHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCCC
>Mature Secondary Structure 
GRKPIKAGAIPRFRVRPQKSGVVYYYYDHGGKPRKETPLGRDYGLAIKRWAELEHAQIT
CCCCCCCCCCCCEEECCCCCCEEEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCC
PAIAVTFRHVAERYRAEVTPTKAYNTQRVEHRCLAPLLKFFDDPPAPFEAIKPVNIRQYL
HHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCHHHCCCCCHHHHH
DWRTSKVIANREVSVFSHLWNWARSKGITDLPNPCGGIRRNKATGRDVYVDDTTYRAVYQ
HHHHHHHHHCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCEEEECCHHHHHHHH
AADQTLRDAMDLAYLTGQRVSDVVSMDERHIVNGALEICQAKTGVKLAIAITGELAVLIK
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCHHHHHHH
RIFDRKRGMKLRSTRLIVDEKGLGLNWKKLAYRFRKVRAAAGIAKEVFQFRDLRAKAATD
HHHHHHCCCEEEEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
KADLAGDIRQAQAQLGHASVTMTEHYVRKRRGAKVTPTR
HHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA