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The map label for this gene is lptA [H]

Identifier: 182681227

GI number: 182681227

Start: 797189

End: 797719

Strand: Reverse

Name: lptA [H]

Synonym: XfasM23_0672

Alternate gene names: 182681227

Gene position: 797719-797189 (Counterclockwise)

Preceding gene: 182681228

Following gene: 182681226

Centisome position: 31.46

GC content: 50.28

Gene sequence:

>531_bases
ATGAACCGAGCGCCGCTCGTTAAATTTTTCTTGTTCCCGTTACTGTTCACACCACTGTCTGCAACAGCTAAAAGCAGCGA
TCGCAACCAACCGATGACAATCGACTCTGCTACTCAAGAAGGCAACATGCTTGGTGACGGCAAGGCGCACTACTCAGGGA
ATGTCGTGATCCAACAAGGCAGCCTTGAGGCCCATGCCGACACTGCCGATGTTTTTCTCAAAAATGGGGACATGGACCGT
ATCGTACTGATCGGAAAACAAGCCAGCCTCAAGCAGGATATGGATAACGGCTCAACACTACATGGCCAAGCCGACAATAT
CGATTACAAGGTCAAAGAGGGCATCATCATCCTCACAGGGAACTATAAAGTCGAATCACCTAAAGGAAATAACACTGGCC
AACGCATGATTTACAACACCCAAACCGGTGACATGCGTAGTGGTAACGACGGCACCCGGGTGCGCACCACAATCCAACCG
AAGAGTGTCTCACAAGGCACCCTGCCTGCCGCCAAGCAGGAGAAAATATAA

Upstream 100 bases:

>100_bases
GTAACGATCACCCATCAAGGTATCATTCAGACCGGCGTTGGGTTCGAAGTCAATACAAAGACCCAGCAATACAAGTTCAA
TTCCAAGGTAAACACGCGTT

Downstream 100 bases:

>100_bases
TGCTTGTAGCCAGCGGCCTGCGTAAGCGCTATAAGCATCGCGAGGTGGTCCGCGAGTTCGGACTGACCCTCCAGCCTGGC
GAGATCGTAGGTCTACTCGG

Product: lipopolysaccharide transport periplasmic protein LptA

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 176; Mature: 176

Protein sequence:

>176_residues
MNRAPLVKFFLFPLLFTPLSATAKSSDRNQPMTIDSATQEGNMLGDGKAHYSGNVVIQQGSLEAHADTADVFLKNGDMDR
IVLIGKQASLKQDMDNGSTLHGQADNIDYKVKEGIIILTGNYKVESPKGNNTGQRMIYNTQTGDMRSGNDGTRVRTTIQP
KSVSQGTLPAAKQEKI

Sequences:

>Translated_176_residues
MNRAPLVKFFLFPLLFTPLSATAKSSDRNQPMTIDSATQEGNMLGDGKAHYSGNVVIQQGSLEAHADTADVFLKNGDMDR
IVLIGKQASLKQDMDNGSTLHGQADNIDYKVKEGIIILTGNYKVESPKGNNTGQRMIYNTQTGDMRSGNDGTRVRTTIQP
KSVSQGTLPAAKQEKI
>Mature_176_residues
MNRAPLVKFFLFPLLFTPLSATAKSSDRNQPMTIDSATQEGNMLGDGKAHYSGNVVIQQGSLEAHADTADVFLKNGDMDR
IVLIGKQASLKQDMDNGSTLHGQADNIDYKVKEGIIILTGNYKVESPKGNNTGQRMIYNTQTGDMRSGNDGTRVRTTIQP
KSVSQGTLPAAKQEKI

Specific function: Required for the translocation of lipopolysaccharide (LPS) from the inner membrane to the outer membrane. May act as a chaperone that facilitates LPS transfer across the aquaeous environment of the periplasm. Interacts specifically with the lipid A domain

COG id: COG1934

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Periplasm [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the lptA family [H]

Homologues:

Organism=Escherichia coli, GI1789592, Length=167, Percent_Identity=29.940119760479, Blast_Score=73, Evalue=1e-14,

Paralogues:

None

Copy number: 60 Molecules/Cell In: Stationary Phase, Rich Media (Based on E. coli). [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR014340
- InterPro:   IPR005653 [H]

Pfam domain/function: PF03968 OstA [H]

EC number: NA

Molecular weight: Translated: 19116; Mature: 19116

Theoretical pI: Translated: 9.39; Mature: 9.39

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
4.0 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
4.0 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNRAPLVKFFLFPLLFTPLSATAKSSDRNQPMTIDSATQEGNMLGDGKAHYSGNVVIQQG
CCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEECCCCCCCEECCCCCEECCCEEEECC
SLEAHADTADVFLKNGDMDRIVLIGKQASLKQDMDNGSTLHGQADNIDYKVKEGIIILTG
CCCCCCCCEEEEEECCCCCEEEEEECCCHHHHHCCCCCEECCCCCCCCEEECCCEEEEEC
NYKVESPKGNNTGQRMIYNTQTGDMRSGNDGTRVRTTIQPKSVSQGTLPAAKQEKI
CEEEECCCCCCCCCEEEEECCCCCCCCCCCCCEEEEEECCCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MNRAPLVKFFLFPLLFTPLSATAKSSDRNQPMTIDSATQEGNMLGDGKAHYSGNVVIQQG
CCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEECCCCCCCEECCCCCEECCCEEEECC
SLEAHADTADVFLKNGDMDRIVLIGKQASLKQDMDNGSTLHGQADNIDYKVKEGIIILTG
CCCCCCCCEEEEEECCCCCEEEEEECCCHHHHHCCCCCEECCCCCCCCEEECCCEEEEEC
NYKVESPKGNNTGQRMIYNTQTGDMRSGNDGTRVRTTIQPKSVSQGTLPAAKQEKI
CEEEECCCCCCCCCEEEEECCCCCCCCCCCCCEEEEEECCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]