Definition | Xylella fastidiosa M23 chromosome, complete genome. |
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Accession | NC_010577 |
Length | 2,535,690 |
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The map label for this gene is 182681221
Identifier: 182681221
GI number: 182681221
Start: 791779
End: 792171
Strand: Reverse
Name: 182681221
Synonym: XfasM23_0666
Alternate gene names: NA
Gene position: 792171-791779 (Counterclockwise)
Preceding gene: 182681222
Following gene: 182681220
Centisome position: 31.24
GC content: 53.94
Gene sequence:
>393_bases ATGGCCTGTGGCATTCTCCTAATCACTCACCCCGGCATTGGCCACGCCTTGTTACGTGTGGCTACAGCGTTATTACAACA ATTACCCCTCAAAATCGAAGCATTTGAAGTCCCTCTCGATGTTGATCTGGATACATTGCTACCACACGCATCAGCAGCGA TGCATCGGGTCAACAACGGAGAAGGAGTGTTAATCATGACCGATCTGTATGGCGCCAGCCCGAGCAACCTCGCACACCGC CTAGCCCAACTAGACACCCCCGTGCGCCGAGTCTCAGCCCTAAGCCTACCGATGCTATTACGTGTGATGAATCACCCAGA ACAAAACCTGCAAGACCTGCCTGCCACGGCAGCCGCCGCAACCCGCAATGGAGCAATCATTGACGATGCTTGA
Upstream 100 bases:
>100_bases ACATGGCACGCGCCTCTGGGCGTAGCACCTACCCCCACAGATCAGCACATACACACCACACACCTATGCTCAGAGAACAC CGCCATGTTAACTTTTCCTT
Downstream 100 bases:
>100_bases ACACGAACTAACAGTAACTAACAAACTAGGACTCCACGCGCGAGCCACTGCCAAACTGGTACAAACAATGTCGAAGTTCC AAAGCAACACGACATTGTCG
Product: PTS system fructose subfamily transporter subunit IIA
Products: protein histidine; sugar phosphate
Alternate protein names: PTS System Fructose Subfamily Transporter Subunit IIA; PTS System Fructose IIA Component; IIa Component Of Sugar Transport PTS System
Number of amino acids: Translated: 130; Mature: 129
Protein sequence:
>130_residues MACGILLITHPGIGHALLRVATALLQQLPLKIEAFEVPLDVDLDTLLPHASAAMHRVNNGEGVLIMTDLYGASPSNLAHR LAQLDTPVRRVSALSLPMLLRVMNHPEQNLQDLPATAAAATRNGAIIDDA
Sequences:
>Translated_130_residues MACGILLITHPGIGHALLRVATALLQQLPLKIEAFEVPLDVDLDTLLPHASAAMHRVNNGEGVLIMTDLYGASPSNLAHR LAQLDTPVRRVSALSLPMLLRVMNHPEQNLQDLPATAAAATRNGAIIDDA >Mature_129_residues ACGILLITHPGIGHALLRVATALLQQLPLKIEAFEVPLDVDLDTLLPHASAAMHRVNNGEGVLIMTDLYGASPSNLAHRL AQLDTPVRRVSALSLPMLLRVMNHPEQNLQDLPATAAAATRNGAIIDDA
Specific function: Unknown
COG id: COG2893
COG function: function code G; Phosphotransferase system, mannose/fructose-specific component IIA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: 2.7.1.69
Molecular weight: Translated: 13849; Mature: 13718
Theoretical pI: Translated: 6.22; Mature: 6.22
Prosite motif: PS51096 PTS_EIIA_TYPE_4
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 3.8 %Met (Translated Protein) 4.6 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 3.1 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MACGILLITHPGIGHALLRVATALLQQLPLKIEAFEVPLDVDLDTLLPHASAAMHRVNNG CCCEEEEEECCCHHHHHHHHHHHHHHHCCCEEEEEECCCCCCHHHHCCHHHHHHHHCCCC EGVLIMTDLYGASPSNLAHRLAQLDTPVRRVSALSLPMLLRVMNHPEQNLQDLPATAAAA CEEEEEEECCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCHHHHHHCCCHHHHH TRNGAIIDDA CCCCCEECCC >Mature Secondary Structure ACGILLITHPGIGHALLRVATALLQQLPLKIEAFEVPLDVDLDTLLPHASAAMHRVNNG CCEEEEEECCCHHHHHHHHHHHHHHHCCCEEEEEECCCCCCHHHHCCHHHHHHHHCCCC EGVLIMTDLYGASPSNLAHRLAQLDTPVRRVSALSLPMLLRVMNHPEQNLQDLPATAAAA CEEEEEEECCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCHHHHHHCCCHHHHH TRNGAIIDDA CCCCCEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: protein N(pi)-phosphohistidine; sugar
Specific reaction: protein N(pi)-phosphohistidine + sugar = protein histidine + sugar phosphate
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA