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The map label for this gene is ssb2 [H]

Identifier: 182681214

GI number: 182681214

Start: 782901

End: 783395

Strand: Direct

Name: ssb2 [H]

Synonym: XfasM23_0658

Alternate gene names: 182681214

Gene position: 782901-783395 (Clockwise)

Preceding gene: 182681208

Following gene: 182681215

Centisome position: 30.88

GC content: 53.33

Gene sequence:

>495_bases
ATGGCCCGTGGTATCAATAAAGTCATCCTCGTCGGTAATCTCGGTAACGATCCGGATATCAAATACACCCAAGGTGGTAT
GACGATCACTACCATCAGCTTGGCGACAACCAGTGTTCGTAAGGACAAGGATGGCAATACCCAGGAGCGGACCGAATGGC
ACAGGGTCAAGTTTTTCGGAAAACTCGGTGAGATTGCCGGGGAATATCTACGTAAGGGATCACAGTGCTATATCGAAGGG
AGCATTCGCTATGACAAGTTCACTGGCCAGGATGGCCAAGAGCGCTATGTTACAGAGATTGTTGCTGATGAGATGCAAAT
GTTGGGTGGCCGTAGTGATGGTGGCGGTATGGGCGGGGGCGGTGAGCGCCCACAGCGTCAAACATCGCAGCGTCAGGATT
ACGCCCCACGTCGCCAGACCCGTCAGCCGTCACAGTCGCCGCAATCTTCACCGCCGCCGATGGACGATTTCGCTGATGAC
GATATTCCTTTCTAA

Upstream 100 bases:

>100_bases
ATATCCGAATGCTGTTAGGGGGGTGTAGAATCTCCGTTACCCTTTAAGAACTGTTTGCCTGACCGTTTTAGGGTTGGCAA
ACGAGATAGTGGAATATTAA

Downstream 100 bases:

>100_bases
GAATGCAATGCGTCTAGGTGATCGTAGGGCGCTTGGGTTTAATGCCCATTGAGTCTGGGTCATTGGCTATATGGCGAGTT
CGTAAAAATCATCATGTTGT

Product: single-stranded DNA-binding protein

Products: NA

Alternate protein names: SSB 2; Helix-destabilizing protein 2 [H]

Number of amino acids: Translated: 164; Mature: 163

Protein sequence:

>164_residues
MARGINKVILVGNLGNDPDIKYTQGGMTITTISLATTSVRKDKDGNTQERTEWHRVKFFGKLGEIAGEYLRKGSQCYIEG
SIRYDKFTGQDGQERYVTEIVADEMQMLGGRSDGGGMGGGGERPQRQTSQRQDYAPRRQTRQPSQSPQSSPPPMDDFADD
DIPF

Sequences:

>Translated_164_residues
MARGINKVILVGNLGNDPDIKYTQGGMTITTISLATTSVRKDKDGNTQERTEWHRVKFFGKLGEIAGEYLRKGSQCYIEG
SIRYDKFTGQDGQERYVTEIVADEMQMLGGRSDGGGMGGGGERPQRQTSQRQDYAPRRQTRQPSQSPQSSPPPMDDFADD
DIPF
>Mature_163_residues
ARGINKVILVGNLGNDPDIKYTQGGMTITTISLATTSVRKDKDGNTQERTEWHRVKFFGKLGEIAGEYLRKGSQCYIEGS
IRYDKFTGQDGQERYVTEIVADEMQMLGGRSDGGGMGGGGERPQRQTSQRQDYAPRRQTRQPSQSPQSSPPPMDDFADDD
IPF

Specific function: This protein is essential for replication of the chromosome. It is also involved in DNA recombination and repair [H]

COG id: COG0629

COG function: function code L; Single-stranded DNA-binding protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 SSB domain [H]

Homologues:

Organism=Homo sapiens, GI4507231, Length=116, Percent_Identity=32.7586206896552, Blast_Score=75, Evalue=3e-14,
Organism=Escherichia coli, GI1790494, Length=179, Percent_Identity=48.6033519553073, Blast_Score=144, Evalue=3e-36,
Organism=Drosophila melanogaster, GI85725234, Length=106, Percent_Identity=33.9622641509434, Blast_Score=69, Evalue=1e-12,
Organism=Drosophila melanogaster, GI24647376, Length=106, Percent_Identity=33.9622641509434, Blast_Score=69, Evalue=1e-12,

Paralogues:

None

Copy number: 1622 Molecules/Cell In: Growth Phase, Glucose-minimal MOPS Media. 2,000 Molecules/Cell In: Glucose minimal media [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR012340
- InterPro:   IPR016027
- InterPro:   IPR000424
- InterPro:   IPR011344 [H]

Pfam domain/function: PF00436 SSB [H]

EC number: NA

Molecular weight: Translated: 18227; Mature: 18096

Theoretical pI: Translated: 5.98; Mature: 5.98

Prosite motif: PS50935 SSB

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
3.7 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MARGINKVILVGNLGNDPDIKYTQGGMTITTISLATTSVRKDKDGNTQERTEWHRVKFFG
CCCCCCEEEEECCCCCCCCCEEECCCEEEEEEEEHHHHHCCCCCCCCHHHHHHHHHHHHH
KLGEIAGEYLRKGSQCYIEGSIRYDKFTGQDGQERYVTEIVADEMQMLGGRSDGGGMGGG
HHHHHHHHHHHCCCEEEEECCEEECCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCC
GERPQRQTSQRQDYAPRRQTRQPSQSPQSSPPPMDDFADDDIPF
CCCCHHHHHHHHHCCCHHHCCCCCCCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure 
ARGINKVILVGNLGNDPDIKYTQGGMTITTISLATTSVRKDKDGNTQERTEWHRVKFFG
CCCCCEEEEECCCCCCCCCEEECCCEEEEEEEEHHHHHCCCCCCCCHHHHHHHHHHHHH
KLGEIAGEYLRKGSQCYIEGSIRYDKFTGQDGQERYVTEIVADEMQMLGGRSDGGGMGGG
HHHHHHHHHHHCCCEEEEECCEEECCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCC
GERPQRQTSQRQDYAPRRQTRQPSQSPQSSPPPMDDFADDDIPF
CCCCHHHHHHHHHCCCHHHCCCCCCCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 10910347 [H]