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The map label for this gene is cyoD [H]

Identifier: 182681209

GI number: 182681209

Start: 777275

End: 777616

Strand: Reverse

Name: cyoD [H]

Synonym: XfasM23_0653

Alternate gene names: 182681209

Gene position: 777616-777275 (Counterclockwise)

Preceding gene: 182681210

Following gene: 182681206

Centisome position: 30.67

GC content: 49.12

Gene sequence:

>342_bases
ATGTCTCATCACCCCCATCACTCTAGCGAGCCTACCGCACCCAGCCAAAGCACTCACCTGAAGTCATACCTCATCGGCTT
TGTGCTAGCCGTGATATTGACTGCCATTCCATTTGCGATAGTGATGAATCGTAGTTTCTCCAAAGAAACCACCGTAGCCC
TGGTTTCAGCGTTGGCAGCGGTGCAAATGCTGGTACATCTTGTGTACTTTCTTCACATGGACCGCTCAAAGGAACAACGC
TCCAACGTCCATGTAGCGCTGTTTTCATTGCTGGTCATTGGGATCGTCATCGTCGGTTCACTGTGGGTGATGCATAATCT
CAACATCCACATGATGTATTGA

Upstream 100 bases:

>100_bases
GCAACAGCACCCGCTTGGCCTGTTTAAGCCTCTTCTGGCACTTCCTGGATGTCATCTGGATCGGTGTCTTTACCATCGTC
TATCTGCTAGGAGCGCTGTA

Downstream 100 bases:

>100_bases
AAACAACGTACAACTCACTTAAAAGGCCCCTGATCATTTGGGGCCTTTTTTAATGCTCATCAATAATTAACATCGCCAAA
AAGCATTACGTCATCATCCA

Product: cytochrome o ubiquinol oxidase subunit IV

Products: Ubiquinone-8; H2O [C]

Alternate protein names: Cytochrome o ubiquinol oxidase subunit IV [H]

Number of amino acids: Translated: 113; Mature: 112

Protein sequence:

>113_residues
MSHHPHHSSEPTAPSQSTHLKSYLIGFVLAVILTAIPFAIVMNRSFSKETTVALVSALAAVQMLVHLVYFLHMDRSKEQR
SNVHVALFSLLVIGIVIVGSLWVMHNLNIHMMY

Sequences:

>Translated_113_residues
MSHHPHHSSEPTAPSQSTHLKSYLIGFVLAVILTAIPFAIVMNRSFSKETTVALVSALAAVQMLVHLVYFLHMDRSKEQR
SNVHVALFSLLVIGIVIVGSLWVMHNLNIHMMY
>Mature_112_residues
SHHPHHSSEPTAPSQSTHLKSYLIGFVLAVILTAIPFAIVMNRSFSKETTVALVSALAAVQMLVHLVYFLHMDRSKEQRS
NVHVALFSLLVIGIVIVGSLWVMHNLNIHMMY

Specific function: Cytochrome o terminal oxidase complex is the component of the aerobic respiratory chain that predominates when cells are grown at high aeration [H]

COG id: COG3125

COG function: function code C; Heme/copper-type cytochrome/quinol oxidase, subunit 4

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the cytochrome c oxidase bacterial subunit 4 family [H]

Homologues:

Organism=Escherichia coli, GI1786632, Length=106, Percent_Identity=42.4528301886792, Blast_Score=94, Evalue=3e-21,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005171
- InterPro:   IPR014210 [H]

Pfam domain/function: PF03626 COX4_pro [H]

EC number: NA

Molecular weight: Translated: 12630; Mature: 12499

Theoretical pI: Translated: 9.70; Mature: 9.70

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
6.2 %Met     (Translated Protein)
6.2 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
5.4 %Met     (Mature Protein)
5.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSHHPHHSSEPTAPSQSTHLKSYLIGFVLAVILTAIPFAIVMNRSFSKETTVALVSALAA
CCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHH
VQMLVHLVYFLHMDRSKEQRSNVHVALFSLLVIGIVIVGSLWVMHNLNIHMMY
HHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEC
>Mature Secondary Structure 
SHHPHHSSEPTAPSQSTHLKSYLIGFVLAVILTAIPFAIVMNRSFSKETTVALVSALAA
CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHH
VQMLVHLVYFLHMDRSKEQRSNVHVALFSLLVIGIVIVGSLWVMHNLNIHMMY
HHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: Ubiquinol-8; O(2) [C]

Specific reaction: Ubiquinol-8 + O(2) = Ubiquinone-8 + H2O [C]

General reaction: Oxidoreductases [C]

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9868765 [H]