| Definition | Xylella fastidiosa M23 chromosome, complete genome. |
|---|---|
| Accession | NC_010577 |
| Length | 2,535,690 |
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The map label for this gene is 182681175
Identifier: 182681175
GI number: 182681175
Start: 728636
End: 728932
Strand: Direct
Name: 182681175
Synonym: XfasM23_0617
Alternate gene names: NA
Gene position: 728636-728932 (Clockwise)
Preceding gene: 182681174
Following gene: 182681176
Centisome position: 28.74
GC content: 51.52
Gene sequence:
>297_bases ATGTCTCAATCGGTATTCAGGTTTTTGTGCTGTGTGTTGGTGGTGATGCCGATTTTCATCCTGTCGGCCTGTGCTTTGAA GTCTTCGCGACCGAATATGCCGCAACCTGTTGTGTTGCCGCAGGTGTCTGGGAATGTGGCGAGGTATCGGTTCGAGATGA CTCAGAATGGCCAGCGGATGACAGCCGATCAGTTCGATGCTTGGATGCAGGCTAACGGGATCCATATCGTTAAAAAGGTG TCGGGTATGCCAACATCGCAACGGCATATAACTCGCCTTGGAGGTTCAGCACCATAG
Upstream 100 bases:
>100_bases GTTTGGATGGTTCATTTGGCATGTTGGTGCTTTGTTTCATGATTTATTACATCTTTGTTGCTTAATGAATTAGATTCATT TTCAGGTGGATAAGGTCAAG
Downstream 100 bases:
>100_bases GGGGGAGTGCTGCTTCTGTGTCGATTGGTCATGCTTAAAAGTCATAAATAGCCAGCTTCATGTCATTTCACCGCCTGCAT GTGGTTGCGCAGCATGGCAT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 98; Mature: 97
Protein sequence:
>98_residues MSQSVFRFLCCVLVVMPIFILSACALKSSRPNMPQPVVLPQVSGNVARYRFEMTQNGQRMTADQFDAWMQANGIHIVKKV SGMPTSQRHITRLGGSAP
Sequences:
>Translated_98_residues MSQSVFRFLCCVLVVMPIFILSACALKSSRPNMPQPVVLPQVSGNVARYRFEMTQNGQRMTADQFDAWMQANGIHIVKKV SGMPTSQRHITRLGGSAP >Mature_97_residues SQSVFRFLCCVLVVMPIFILSACALKSSRPNMPQPVVLPQVSGNVARYRFEMTQNGQRMTADQFDAWMQANGIHIVKKVS GMPTSQRHITRLGGSAP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 10868; Mature: 10737
Theoretical pI: Translated: 11.03; Mature: 11.03
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.1 %Cys (Translated Protein) 7.1 %Met (Translated Protein) 10.2 %Cys+Met (Translated Protein) 3.1 %Cys (Mature Protein) 6.2 %Met (Mature Protein) 9.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSQSVFRFLCCVLVVMPIFILSACALKSSRPNMPQPVVLPQVSGNVARYRFEMTQNGQRM CCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEECCCCCEEEEEEECCCCCCCC TADQFDAWMQANGIHIVKKVSGMPTSQRHITRLGGSAP CHHHHHHHHHCCCEEEEECCCCCCCCHHHHHHCCCCCC >Mature Secondary Structure SQSVFRFLCCVLVVMPIFILSACALKSSRPNMPQPVVLPQVSGNVARYRFEMTQNGQRM CHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEECCCCCEEEEEEECCCCCCCC TADQFDAWMQANGIHIVKKVSGMPTSQRHITRLGGSAP CHHHHHHHHHCCCEEEEECCCCCCCCHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA