Definition | Xylella fastidiosa M23 chromosome, complete genome. |
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Accession | NC_010577 |
Length | 2,535,690 |
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The map label for this gene is 182681153
Identifier: 182681153
GI number: 182681153
Start: 706251
End: 706754
Strand: Reverse
Name: 182681153
Synonym: XfasM23_0595
Alternate gene names: NA
Gene position: 706754-706251 (Counterclockwise)
Preceding gene: 182681154
Following gene: 182681137
Centisome position: 27.87
GC content: 54.17
Gene sequence:
>504_bases ATGCCTTCCACATTAACCACATCTCAAACCACCCCCAACGCACTGGAAAATGTAGTTCGCATCGGACACATTGTTCCGGA AGATGCCTTAGAGCTGCTTGCACGTTATGGCCTGCACTTGCACCTCATCGAAGATGGAGCGCCAATCCCTGGCAGCTACT GGGGCGAACCAGAGGCTGGCATCATTGGTTGTAACGTCTACGTGCGCAACGACACGCCCGTGCACTCAATGCTGCATGAA GCATGCCACCTGATCGTACTCCCACCGGAACAGCGCGCAACGGTCCATACAAACGCAACCAATTCAAGCGAAGAAGAAGA CGCCACCTGCTATTTACAAATAGTGCTGGCCGATGCACTTCAGGGGATCGACCGCGACCGGCTCATGCAGGATATGGATG CTTGGGGATATAGCTACCGCCTTGGGTCAACGCGGGCGTGGTTCGAACAAGATGCGGAAAATGCACGCGACTGGCTAAAC GCAAGAGGCTTACTTACCCCATAA
Upstream 100 bases:
>100_bases ATATATCCGTCGCACTACCCGACGATTCAGAGCGCTGAACCAAGCAGCGTCCTACTTCAACAAATACCGCTAAGTCTGCC CGTTTCTCCCAAACTCATTG
Downstream 100 bases:
>100_bases ATTTCAGTACAACAGATCGAACACACATCCATCCTCCATCACACACCGCCATCCTCAGTAACTCACAGGATGTGCATGCA ACGCAAGCACACCCGCTGCG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 167; Mature: 166
Protein sequence:
>167_residues MPSTLTTSQTTPNALENVVRIGHIVPEDALELLARYGLHLHLIEDGAPIPGSYWGEPEAGIIGCNVYVRNDTPVHSMLHE ACHLIVLPPEQRATVHTNATNSSEEEDATCYLQIVLADALQGIDRDRLMQDMDAWGYSYRLGSTRAWFEQDAENARDWLN ARGLLTP
Sequences:
>Translated_167_residues MPSTLTTSQTTPNALENVVRIGHIVPEDALELLARYGLHLHLIEDGAPIPGSYWGEPEAGIIGCNVYVRNDTPVHSMLHE ACHLIVLPPEQRATVHTNATNSSEEEDATCYLQIVLADALQGIDRDRLMQDMDAWGYSYRLGSTRAWFEQDAENARDWLN ARGLLTP >Mature_166_residues PSTLTTSQTTPNALENVVRIGHIVPEDALELLARYGLHLHLIEDGAPIPGSYWGEPEAGIIGCNVYVRNDTPVHSMLHEA CHLIVLPPEQRATVHTNATNSSEEEDATCYLQIVLADALQGIDRDRLMQDMDAWGYSYRLGSTRAWFEQDAENARDWLNA RGLLTP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 18578; Mature: 18447
Theoretical pI: Translated: 4.41; Mature: 4.41
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 4.2 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPSTLTTSQTTPNALENVVRIGHIVPEDALELLARYGLHLHLIEDGAPIPGSYWGEPEAG CCCCCCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHCCCEEEEECCCCCCCCCCCCCCCCC IIGCNVYVRNDTPVHSMLHEACHLIVLPPEQRATVHTNATNSSEEEDATCYLQIVLADAL EEEEEEEECCCCCHHHHHHHHCEEEEECCCCCCEEEECCCCCCCCCCHHHHHHHHHHHHH QGIDRDRLMQDMDAWGYSYRLGSTRAWFEQDAENARDWLNARGLLTP HCCCHHHHHHHHHHCCEEEECCCCHHHHHHHHHHHHHHHHCCCCCCC >Mature Secondary Structure PSTLTTSQTTPNALENVVRIGHIVPEDALELLARYGLHLHLIEDGAPIPGSYWGEPEAG CCCCCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHCCCEEEEECCCCCCCCCCCCCCCCC IIGCNVYVRNDTPVHSMLHEACHLIVLPPEQRATVHTNATNSSEEEDATCYLQIVLADAL EEEEEEEECCCCCHHHHHHHHCEEEEECCCCCCEEEECCCCCCCCCCHHHHHHHHHHHHH QGIDRDRLMQDMDAWGYSYRLGSTRAWFEQDAENARDWLNARGLLTP HCCCHHHHHHHHHHCCEEEECCCCHHHHHHHHHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA