Definition | Xylella fastidiosa M23 chromosome, complete genome. |
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Accession | NC_010577 |
Length | 2,535,690 |
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The map label for this gene is gnl [H]
Identifier: 182681131
GI number: 182681131
Start: 681875
End: 682891
Strand: Reverse
Name: gnl [H]
Synonym: XfasM23_0573
Alternate gene names: 182681131
Gene position: 682891-681875 (Counterclockwise)
Preceding gene: 182681132
Following gene: 182681130
Centisome position: 26.93
GC content: 42.48
Gene sequence:
>1017_bases ATGAAAGCCACACGAAAAAATTATTTCACTCACATCATCATCGCTGGATTCTTTCTAACGCTTCCATTCCACGGGATCAC GACACCACACAACACCAAAATTCAAACAGCGAAAATTCAAAAAGAAGATCCACTTTTTGAAACACTAATCGATAAAGCAC CTGAACTCATCACCCTCTATGACCAAGGGATTTGGCTTGAGGGACCTCAAACCTTACCTGACGGCAGCCTTATTTGGAGC GATGTCAAAGCAAACCGCGTGCTTCGCTGGCAAGAAGGAAAAGGAGTTTCCGTCTTTTTAGAACCGTCACATTTCCAAAA TGGCCATGCCTTAGACAATGAAGGACGCTTACTCGCAGCATCGCATGGGAAAAGGGCGATAGAACGGCTTGAGAAAGATG GTAAGTGGACGATAGTGGTCGATTCTTATCAAGGAAATAAACTAAACAGTCCAAACGACCTCATTGTCGATCGTAGTGGC GATATATGGTTCACTGATCCTGCATTTGGCATCAATAATCCTAAAGAAAGCTACGGCGGCAAAGCAGTCCAAGGAGGAGA TTACAGCTATCGCTACTCACCAAAAACAGGCACCATCGTTCGCTTAAAAACACCTCTTGTCAAAGCACCGAATGGGATCG CCCTCAGTCCTGACGAAAAAACGCTTTATATCGCAGACAGTGAATTAGCCTATAACTCCAATAACTCTGCTCTAAATAGC AGAATTGTCGCTTACGATATTAAAAAAGATAAATCACTTAGAAATGGAAGAGTGCTTGCATCTATTTCACACGGCATACC AGACGGTATCGTGACTGATGCCAATGGAAATATATGGTCAAGTAGTGAAGGAGCTATTCAAATATTTTCCCCCAAAGGAA AACTTCTTGGCAAAGTAATCCTACCTGGCACTGTCGGCAACATGAATTTTGCACTGGATAAAGAAAATAACCCTATTCTT TACGTGACAGCAAGCCATGCCATTTACCGTCTAAAAATAAAGGTAAAAGGCAAGTAA
Upstream 100 bases:
>100_bases AAAGATTAGTAACCACATCATCAAAAATGGATAAAACACTATAAATCTCAAAACAATCACCACTATGCAATGTATTAAGA AACAAAATAAGGATGCTTCA
Downstream 100 bases:
>100_bases ACACTAAATAATAAAACTATCGTTAAGGCGCATGCCTTAACGATAGAAATGTATGGATATGGCCAGAAACCAACACACCG GCCACAGCGTATCAACCTAA
Product: gluconolactonase
Products: NA
Alternate protein names: D-glucono-delta-lactone lactonohydrolase [H]
Number of amino acids: Translated: 338; Mature: 338
Protein sequence:
>338_residues MKATRKNYFTHIIIAGFFLTLPFHGITTPHNTKIQTAKIQKEDPLFETLIDKAPELITLYDQGIWLEGPQTLPDGSLIWS DVKANRVLRWQEGKGVSVFLEPSHFQNGHALDNEGRLLAASHGKRAIERLEKDGKWTIVVDSYQGNKLNSPNDLIVDRSG DIWFTDPAFGINNPKESYGGKAVQGGDYSYRYSPKTGTIVRLKTPLVKAPNGIALSPDEKTLYIADSELAYNSNNSALNS RIVAYDIKKDKSLRNGRVLASISHGIPDGIVTDANGNIWSSSEGAIQIFSPKGKLLGKVILPGTVGNMNFALDKENNPIL YVTASHAIYRLKIKVKGK
Sequences:
>Translated_338_residues MKATRKNYFTHIIIAGFFLTLPFHGITTPHNTKIQTAKIQKEDPLFETLIDKAPELITLYDQGIWLEGPQTLPDGSLIWS DVKANRVLRWQEGKGVSVFLEPSHFQNGHALDNEGRLLAASHGKRAIERLEKDGKWTIVVDSYQGNKLNSPNDLIVDRSG DIWFTDPAFGINNPKESYGGKAVQGGDYSYRYSPKTGTIVRLKTPLVKAPNGIALSPDEKTLYIADSELAYNSNNSALNS RIVAYDIKKDKSLRNGRVLASISHGIPDGIVTDANGNIWSSSEGAIQIFSPKGKLLGKVILPGTVGNMNFALDKENNPIL YVTASHAIYRLKIKVKGK >Mature_338_residues MKATRKNYFTHIIIAGFFLTLPFHGITTPHNTKIQTAKIQKEDPLFETLIDKAPELITLYDQGIWLEGPQTLPDGSLIWS DVKANRVLRWQEGKGVSVFLEPSHFQNGHALDNEGRLLAASHGKRAIERLEKDGKWTIVVDSYQGNKLNSPNDLIVDRSG DIWFTDPAFGINNPKESYGGKAVQGGDYSYRYSPKTGTIVRLKTPLVKAPNGIALSPDEKTLYIADSELAYNSNNSALNS RIVAYDIKKDKSLRNGRVLASISHGIPDGIVTDANGNIWSSSEGAIQIFSPKGKLLGKVILPGTVGNMNFALDKENNPIL YVTASHAIYRLKIKVKGK
Specific function: Hydrolyzes the gluconolactone formed by glucose-fructose oxidoreductase, and that formed in aerobic conditions by the glucose dehydrogenase present [H]
COG id: COG3386
COG function: function code G; Gluconolactonase
Gene ontology:
Cell location: Periplasm (Probable) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011042 - InterPro: IPR013658 - InterPro: IPR005511 - InterPro: IPR006311 [H]
Pfam domain/function: PF08450 SGL [H]
EC number: =3.1.1.17 [H]
Molecular weight: Translated: 37286; Mature: 37286
Theoretical pI: Translated: 9.83; Mature: 9.83
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 0.6 %Met (Translated Protein) 0.6 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.6 %Met (Mature Protein) 0.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKATRKNYFTHIIIAGFFLTLPFHGITTPHNTKIQTAKIQKEDPLFETLIDKAPELITLY CCCCHHHHHHHHHEEHHHHHCCCCCCCCCCCCEEEEEEECCCCCHHHHHHHCCCCEEEEE DQGIWLEGPQTLPDGSLIWSDVKANRVLRWQEGKGVSVFLEPSHFQNGHALDNEGRLLAA ECCEEECCCCCCCCCCEEEECCCCCEEEEEECCCCEEEEECCCCCCCCCEECCCCCEEEE SHGKRAIERLEKDGKWTIVVDSYQGNKLNSPNDLIVDRSGDIWFTDPAFGINNPKESYGG CCCHHHHHHHHCCCCEEEEEECCCCCCCCCCCCEEEECCCCEEEECCCCCCCCCHHHCCC KAVQGGDYSYRYSPKTGTIVRLKTPLVKAPNGIALSPDEKTLYIADSELAYNSNNSALNS CEEECCCEEEEECCCCCEEEEEECCCEECCCCCEECCCCCEEEEECCEEEECCCCCHHCC RIVAYDIKKDKSLRNGRVLASISHGIPDGIVTDANGNIWSSSEGAIQIFSPKGKLLGKVI EEEEEEECCCCCCCCCEEEEEECCCCCCCEEECCCCCEEECCCCCEEEECCCCCEEEEEE LPGTVGNMNFALDKENNPILYVTASHAIYRLKIKVKGK ECCCCCCCEEEEECCCCCEEEEEECCEEEEEEEEEECC >Mature Secondary Structure MKATRKNYFTHIIIAGFFLTLPFHGITTPHNTKIQTAKIQKEDPLFETLIDKAPELITLY CCCCHHHHHHHHHEEHHHHHCCCCCCCCCCCCEEEEEEECCCCCHHHHHHHCCCCEEEEE DQGIWLEGPQTLPDGSLIWSDVKANRVLRWQEGKGVSVFLEPSHFQNGHALDNEGRLLAA ECCEEECCCCCCCCCCEEEECCCCCEEEEEECCCCEEEEECCCCCCCCCEECCCCCEEEE SHGKRAIERLEKDGKWTIVVDSYQGNKLNSPNDLIVDRSGDIWFTDPAFGINNPKESYGG CCCHHHHHHHHCCCCEEEEEECCCCCCCCCCCCEEEECCCCEEEECCCCCCCCCHHHCCC KAVQGGDYSYRYSPKTGTIVRLKTPLVKAPNGIALSPDEKTLYIADSELAYNSNNSALNS CEEECCCEEEEECCCCCEEEEEECCCEECCCCCEECCCCCEEEEECCEEEECCCCCHHCC RIVAYDIKKDKSLRNGRVLASISHGIPDGIVTDANGNIWSSSEGAIQIFSPKGKLLGKVI EEEEEEECCCCCCCCCEEEEEECCCCCCCEEECCCCCEEECCCCCEEEECCCCCEEEEEE LPGTVGNMNFALDKENNPILYVTASHAIYRLKIKVKGK ECCCCCCCEEEEECCCCCEEEEEECCEEEEEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 1482681 [H]