Definition | Xylella fastidiosa M23 chromosome, complete genome. |
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Accession | NC_010577 |
Length | 2,535,690 |
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The map label for this gene is 182681118
Identifier: 182681118
GI number: 182681118
Start: 665073
End: 665363
Strand: Reverse
Name: 182681118
Synonym: XfasM23_0560
Alternate gene names: NA
Gene position: 665363-665073 (Counterclockwise)
Preceding gene: 182681120
Following gene: 182681116
Centisome position: 26.24
GC content: 55.33
Gene sequence:
>291_bases ATGGGTGATGGTCATGACTTCTCTCGGTTCTGCGGTGTGGTACAGAGGCTGCAGGCTGCGGGGCGATGCTTGGGGAGATG TGAGGCACTGGCTGGTACGTTAGGGATGGTTAGGTCGCTAGAGTGGCTGTGTGTTGCTGGCGGCAACGGGATACGAATCA TGCGCAGGGGGGATGGGCTTGCGTGCGGTGAGTTACGTCGTTTGCAGTGCAGGAAAATAACGAAAAAACTCGGTGGATGT TTGCTGATCAATGCATCGGCTCTCAAAACGAAGACTGCGGTGTTGCGTTGA
Upstream 100 bases:
>100_bases TTTTTGCACATGCCGTTTGTCAGTCACTCCTTTAGACATCATGCGTGGCTCTTTGTCTGTTTAGTTGAAGTGCATCGCTT GTTTTAGGTAGCGGTACTTG
Downstream 100 bases:
>100_bases TGGGCAGTATAGATTTCAGTCTTCTGTATGCGATTTGTTGCTCTTTGGGGTGCTTGGTGACGGATTGCGGGTTTTCTTCT CATTGCGTAGTTCATGTAGT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 96; Mature: 95
Protein sequence:
>96_residues MGDGHDFSRFCGVVQRLQAAGRCLGRCEALAGTLGMVRSLEWLCVAGGNGIRIMRRGDGLACGELRRLQCRKITKKLGGC LLINASALKTKTAVLR
Sequences:
>Translated_96_residues MGDGHDFSRFCGVVQRLQAAGRCLGRCEALAGTLGMVRSLEWLCVAGGNGIRIMRRGDGLACGELRRLQCRKITKKLGGC LLINASALKTKTAVLR >Mature_95_residues GDGHDFSRFCGVVQRLQAAGRCLGRCEALAGTLGMVRSLEWLCVAGGNGIRIMRRGDGLACGELRRLQCRKITKKLGGCL LINASALKTKTAVLR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 10305; Mature: 10174
Theoretical pI: Translated: 10.89; Mature: 10.89
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
7.3 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 10.4 %Cys+Met (Translated Protein) 7.4 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 9.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGDGHDFSRFCGVVQRLQAAGRCLGRCEALAGTLGMVRSLEWLCVAGGNGIRIMRRGDGL CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEECCCCEEEEECCCCC ACGELRRLQCRKITKKLGGCLLINASALKTKTAVLR CHHHHHHHHHHHHHHHHCCEEEEECHHHHHHHHHCC >Mature Secondary Structure GDGHDFSRFCGVVQRLQAAGRCLGRCEALAGTLGMVRSLEWLCVAGGNGIRIMRRGDGL CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEECCCCEEEEECCCCC ACGELRRLQCRKITKKLGGCLLINASALKTKTAVLR CHHHHHHHHHHHHHHHHCCEEEEECHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA