Definition | Xylella fastidiosa M23 chromosome, complete genome. |
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Accession | NC_010577 |
Length | 2,535,690 |
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The map label for this gene is 182681071
Identifier: 182681071
GI number: 182681071
Start: 621471
End: 622775
Strand: Reverse
Name: 182681071
Synonym: XfasM23_0513
Alternate gene names: NA
Gene position: 622775-621471 (Counterclockwise)
Preceding gene: 182681072
Following gene: 182681070
Centisome position: 24.56
GC content: 42.68
Gene sequence:
>1305_bases ATGAGTATTTTTCGCATACTCGTTTTTTTTGTGATTCTTTTTATTTCTCGTTTTAGTTTTGCTTGCGAGATTGGTGAGCC GCATTGGGACCCTGGTCAGTGTTTAGATAGGGGCGAGGCTTATGCTATCGCTAGTGCAAGTTATCAGATGTGGCGTTCTA ATCAATTGAAGGATAGTAATATTCCTGGTTTGCAGGTGGTTGATTGTCCTATGACTGATGATGGTCATATTATTGGTTTT GGGGGGTATACCACTGCGCCCGGTTATCCCTCTTCTGATAGTTGTAGTAATAGTCTGGTCTATTTTCAGCGGGTTTATCC TGAGGGGAAAACTTGTCTTACGCGTTCTCCTAAATCACTTCTTGGTTTAACGCTTCCTTCTGGTGTGCGTGTTCCGTCTA CGGCTTGTTATGATGGTTGTTCTTATGATTTGGATCGTTCTCATGGGATTATTGGTGTAGGACAAGATGACGGCAAGGTT AGGTATGTTTTGCCTGGTATGACCCCTAATGGGAATTTGTGTGTTCTTTCTCCGCCAGGTTCTTCTTCTGAGTCTAGTCA GGATACGCCTCCTGTTCAGGATGTCGTTAAAGATGAATGTACACATATGGGCACATTAACGCAGTGTGTGAGGCCGGACG GTAAATATTGTGCTACTTCATCGACTGGGCATCAGTATTGTTGGAAACCAGGTGAGGTGGGAACTCAGATTGCTTCTGAT GGTAATCATGCAGCAACATTGAATAAAGTTGATGTTCCAGTTATTGCTCCTGTGGACGCGCCTAAGGATAAGGGTGATTG GCGTGTAGATGGTAAGGGCACATCTACTCAGATTATTAATAATACTTATAACAATTATAATACAACTACATTTGCTTCTA CTGGTTCTTCTGGTGGCGGTTCTAGCGGTGGTTCTAGTAGTTCTGGTGGTCAGAGTAGTGGCGGCGGTAGTGATAAGTCG GGTGGCGGTGATAAATCAGGTGGTGATAAGGATACACCTGGTAGTGGTTCACCTTCAGGGACTGGTGTTCTTTATAAACG TAATGGTAAGACATTGGATACCGTCGTATCAGGATATCAGGCTAAGGTAAATGATCTTCCTTTTATTTCTGGTATTTCTT CCTTTTTAACCATTTCCGCATCTGGGGAATGTCCTATATTTACGTTGTCTGCTTCTGCGTATTGGCCAGAAATGACATTT GATTATCATTGCAGCGGTGTTTTTTTGAGTTTTTTGAGGTCCGCTGGTTATATTATTTTTGCGATTGCTTCTTATTTTGC TGTTCGTATTGCTACCTTGCGTTAG
Upstream 100 bases:
>100_bases TTCACCGGCTGGTGGGGGTGTGTGCTTTGATGATTACTTTATTCTCTTGTTTCTTGGGTGCTTTATGCGGATGGGCTGCT GTTAAGGGGCTGGATGCTTC
Downstream 100 bases:
>100_bases GTTGGAGGAATCATGTTTATATTAAGGGTTGCGTGGTTAACTGATCTTACGCAGTGGATTTGGGATTTAATCACTAAGAT GTTTCTTGCTTTAGCTGATT
Product: hypothetical protein
Products: NA
Alternate protein names: Filamentous Phage PhiLf Adsorption Protein III
Number of amino acids: Translated: 434; Mature: 433
Protein sequence:
>434_residues MSIFRILVFFVILFISRFSFACEIGEPHWDPGQCLDRGEAYAIASASYQMWRSNQLKDSNIPGLQVVDCPMTDDGHIIGF GGYTTAPGYPSSDSCSNSLVYFQRVYPEGKTCLTRSPKSLLGLTLPSGVRVPSTACYDGCSYDLDRSHGIIGVGQDDGKV RYVLPGMTPNGNLCVLSPPGSSSESSQDTPPVQDVVKDECTHMGTLTQCVRPDGKYCATSSTGHQYCWKPGEVGTQIASD GNHAATLNKVDVPVIAPVDAPKDKGDWRVDGKGTSTQIINNTYNNYNTTTFASTGSSGGGSSGGSSSSGGQSSGGGSDKS GGGDKSGGDKDTPGSGSPSGTGVLYKRNGKTLDTVVSGYQAKVNDLPFISGISSFLTISASGECPIFTLSASAYWPEMTF DYHCSGVFLSFLRSAGYIIFAIASYFAVRIATLR
Sequences:
>Translated_434_residues MSIFRILVFFVILFISRFSFACEIGEPHWDPGQCLDRGEAYAIASASYQMWRSNQLKDSNIPGLQVVDCPMTDDGHIIGF GGYTTAPGYPSSDSCSNSLVYFQRVYPEGKTCLTRSPKSLLGLTLPSGVRVPSTACYDGCSYDLDRSHGIIGVGQDDGKV RYVLPGMTPNGNLCVLSPPGSSSESSQDTPPVQDVVKDECTHMGTLTQCVRPDGKYCATSSTGHQYCWKPGEVGTQIASD GNHAATLNKVDVPVIAPVDAPKDKGDWRVDGKGTSTQIINNTYNNYNTTTFASTGSSGGGSSGGSSSSGGQSSGGGSDKS GGGDKSGGDKDTPGSGSPSGTGVLYKRNGKTLDTVVSGYQAKVNDLPFISGISSFLTISASGECPIFTLSASAYWPEMTF DYHCSGVFLSFLRSAGYIIFAIASYFAVRIATLR >Mature_433_residues SIFRILVFFVILFISRFSFACEIGEPHWDPGQCLDRGEAYAIASASYQMWRSNQLKDSNIPGLQVVDCPMTDDGHIIGFG GYTTAPGYPSSDSCSNSLVYFQRVYPEGKTCLTRSPKSLLGLTLPSGVRVPSTACYDGCSYDLDRSHGIIGVGQDDGKVR YVLPGMTPNGNLCVLSPPGSSSESSQDTPPVQDVVKDECTHMGTLTQCVRPDGKYCATSSTGHQYCWKPGEVGTQIASDG NHAATLNKVDVPVIAPVDAPKDKGDWRVDGKGTSTQIINNTYNNYNTTTFASTGSSGGGSSGGSSSSGGQSSGGGSDKSG GGDKSGGDKDTPGSGSPSGTGVLYKRNGKTLDTVVSGYQAKVNDLPFISGISSFLTISASGECPIFTLSASAYWPEMTFD YHCSGVFLSFLRSAGYIIFAIASYFAVRIATLR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 45758; Mature: 45627
Theoretical pI: Translated: 5.90; Mature: 5.90
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.2 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 4.6 %Cys+Met (Translated Protein) 3.2 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 4.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSIFRILVFFVILFISRFSFACEIGEPHWDPGQCLDRGEAYAIASASYQMWRSNQLKDSN CHHHHHHHHHHHHHHHHHHEEEECCCCCCCHHHHHCCCCEEEEECCHHHHHHCCCCCCCC IPGLQVVDCPMTDDGHIIGFGGYTTAPGYPSSDSCSNSLVYFQRVYPEGKTCLTRSPKSL CCCCEEEECCCCCCCCEEEECCCCCCCCCCCCCCCCCCEEEEEEECCCCCEEECCCCHHH LGLTLPSGVRVPSTACYDGCSYDLDRSHGIIGVGQDDGKVRYVLPGMTPNGNLCVLSPPG HEEECCCCCCCCCCHHCCCCCCCCCCCCCEEEECCCCCEEEEEECCCCCCCCEEEECCCC SSSESSQDTPPVQDVVKDECTHMGTLTQCVRPDGKYCATSSTGHQYCWKPGEVGTQIASD CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCEEECCCCCCCCCCCCCCCCCCCCCC GNHAATLNKVDVPVIAPVDAPKDKGDWRVDGKGTSTQIINNTYNNYNTTTFASTGSSGGG CCCEEEEECCCCCEEECCCCCCCCCCEEECCCCCCEEEEECCCCCCCEEEEECCCCCCCC SSGGSSSSGGQSSGGGSDKSGGGDKSGGDKDTPGSGSPSGTGVLYKRNGKTLDTVVSGYQ CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCHHHHHCCCH AKVNDLPFISGISSFLTISASGECPIFTLSASAYWPEMTFDYHCSGVFLSFLRSAGYIIF HCCCCCCHHHCCCCEEEEECCCCCCEEEEECCCCCCCCEEEECHHHHHHHHHHHCCEEEH AIASYFAVRIATLR HHHHHHHHEEEECC >Mature Secondary Structure SIFRILVFFVILFISRFSFACEIGEPHWDPGQCLDRGEAYAIASASYQMWRSNQLKDSN HHHHHHHHHHHHHHHHHHEEEECCCCCCCHHHHHCCCCEEEEECCHHHHHHCCCCCCCC IPGLQVVDCPMTDDGHIIGFGGYTTAPGYPSSDSCSNSLVYFQRVYPEGKTCLTRSPKSL CCCCEEEECCCCCCCCEEEECCCCCCCCCCCCCCCCCCEEEEEEECCCCCEEECCCCHHH LGLTLPSGVRVPSTACYDGCSYDLDRSHGIIGVGQDDGKVRYVLPGMTPNGNLCVLSPPG HEEECCCCCCCCCCHHCCCCCCCCCCCCCEEEECCCCCEEEEEECCCCCCCCEEEECCCC SSSESSQDTPPVQDVVKDECTHMGTLTQCVRPDGKYCATSSTGHQYCWKPGEVGTQIASD CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCEEECCCCCCCCCCCCCCCCCCCCCC GNHAATLNKVDVPVIAPVDAPKDKGDWRVDGKGTSTQIINNTYNNYNTTTFASTGSSGGG CCCEEEEECCCCCEEECCCCCCCCCCEEECCCCCCEEEEECCCCCCCEEEEECCCCCCCC SSGGSSSSGGQSSGGGSDKSGGGDKSGGDKDTPGSGSPSGTGVLYKRNGKTLDTVVSGYQ CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCHHHHHCCCH AKVNDLPFISGISSFLTISASGECPIFTLSASAYWPEMTFDYHCSGVFLSFLRSAGYIIF HCCCCCCHHHCCCCEEEEECCCCCCEEEEECCCCCCCCEEEECHHHHHHHHHHHCCEEEH AIASYFAVRIATLR HHHHHHHHEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA