| Definition | Xylella fastidiosa M23 chromosome, complete genome. |
|---|---|
| Accession | NC_010577 |
| Length | 2,535,690 |
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The map label for this gene is yqaB [C]
Identifier: 182681040
GI number: 182681040
Start: 581267
End: 581944
Strand: Direct
Name: yqaB [C]
Synonym: XfasM23_0479
Alternate gene names: 182681040
Gene position: 581267-581944 (Clockwise)
Preceding gene: 182681039
Following gene: 182681042
Centisome position: 22.92
GC content: 56.05
Gene sequence:
>678_bases ATGGTGAGTGCTCCGTTGTCATTCATGCCCGAGGCGGTGATCTTCGACATGGATGGTCTGATGCTTGATAGCGAGCGCGT GAGCATCGAATGTCGGTGTCGCGCTGCGTTTGATCTTGAGCACCAAATTGAGCCGGATTACTGGTTGCAGATGGTCGGGG TGAGCGATATCGCTTGTCACGTGCAGCTGAGCGCACGCATTGGTGCTGTATCAGCGACAGCGTTGTTGGCCCGCAGCGAT GCGTTATATGAGGCGGTGGTTATGAAGGGTGTGCCGCATCGGCCAGGAATCGTTACGTTACTGGAGTGGCTGTTCGCGCG TGGTATTCCGTGTGCGGTTGGTACGTCTACGCGGCGTCCGTTGGCGCTGCGTAAATTGAATACGGCAGGCTTGTTGTCGC GTTTCGATGTGGTGTGTACTGCGAGTGAAGTTGCGCAAGCTAAGCCAGCGCCAGATATTTATTTATTGGCTGCGCACACG CTTGGTATCGTTCCGAGGCGCTGCTTGGTGGTGGAGGATTCACCGATTGGGGTACGTGCCGCATTGGCTGCAGGTATGAC GCCAATTCAGGTGCCGGATTTGCTGATGCCGGATGCTCAGGTAAGCGCGCTGGGGCACCGGATTGTGGCTTCATTGACAG AGGTGCAGAGCCTGTTGGAAGCGTGTTTTGATGTCTGA
Upstream 100 bases:
>100_bases GTGCTATCGGTGGCTTGGTCCTGGATGGACTTCCGGAAGGGCAGTGGCGTGTGCTTGAAGCCCAGGATCTTGCGATGCTG TTTTCACAGGGGAGCCGATG
Downstream 100 bases:
>100_bases ACATTCTTTTCGCGTCGTGTGTGGTGGATGTGATCGGTGGGGTTGTATGCTCTGTGTTGTGTATGTGTTGGTTTGTGAGT GATGTGGGTGTGTGCTTTAG
Product: HAD family hydrolase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 225; Mature: 225
Protein sequence:
>225_residues MVSAPLSFMPEAVIFDMDGLMLDSERVSIECRCRAAFDLEHQIEPDYWLQMVGVSDIACHVQLSARIGAVSATALLARSD ALYEAVVMKGVPHRPGIVTLLEWLFARGIPCAVGTSTRRPLALRKLNTAGLLSRFDVVCTASEVAQAKPAPDIYLLAAHT LGIVPRRCLVVEDSPIGVRAALAAGMTPIQVPDLLMPDAQVSALGHRIVASLTEVQSLLEACFDV
Sequences:
>Translated_225_residues MVSAPLSFMPEAVIFDMDGLMLDSERVSIECRCRAAFDLEHQIEPDYWLQMVGVSDIACHVQLSARIGAVSATALLARSD ALYEAVVMKGVPHRPGIVTLLEWLFARGIPCAVGTSTRRPLALRKLNTAGLLSRFDVVCTASEVAQAKPAPDIYLLAAHT LGIVPRRCLVVEDSPIGVRAALAAGMTPIQVPDLLMPDAQVSALGHRIVASLTEVQSLLEACFDV >Mature_225_residues MVSAPLSFMPEAVIFDMDGLMLDSERVSIECRCRAAFDLEHQIEPDYWLQMVGVSDIACHVQLSARIGAVSATALLARSD ALYEAVVMKGVPHRPGIVTLLEWLFARGIPCAVGTSTRRPLALRKLNTAGLLSRFDVVCTASEVAQAKPAPDIYLLAAHT LGIVPRRCLVVEDSPIGVRAALAAGMTPIQVPDLLMPDAQVSALGHRIVASLTEVQSLLEACFDV
Specific function: Displays high phosphatase activity toward erythrose 4- phosphate, fructose 6-phosphate, 2-deoxyglucose 6-phosphate, and mannose 6-phosphate. May have a role in the intracellular metabolism of many phosphorylated carbohydrates [H]
COG id: COG0637
COG function: function code R; Predicted phosphatase/phosphohexomutase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the HAD-like hydrolase superfamily [H]
Homologues:
Organism=Escherichia coli, GI1789046, Length=182, Percent_Identity=30.7692307692308, Blast_Score=75, Evalue=3e-15, Organism=Escherichia coli, GI87082080, Length=176, Percent_Identity=35.2272727272727, Blast_Score=74, Evalue=9e-15, Organism=Escherichia coli, GI1788021, Length=215, Percent_Identity=30.6976744186047, Blast_Score=61, Evalue=7e-11, Organism=Drosophila melanogaster, GI116008157, Length=214, Percent_Identity=33.6448598130841, Blast_Score=90, Evalue=1e-18, Organism=Drosophila melanogaster, GI17137324, Length=218, Percent_Identity=32.1100917431193, Blast_Score=80, Evalue=9e-16, Organism=Drosophila melanogaster, GI45550911, Length=199, Percent_Identity=30.1507537688442, Blast_Score=68, Evalue=4e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005834 - InterPro: IPR023214 - InterPro: IPR006439 - InterPro: IPR006402 - InterPro: IPR005833 [H]
Pfam domain/function: PF00702 Hydrolase [H]
EC number: NA
Molecular weight: Translated: 24174; Mature: 24174
Theoretical pI: Translated: 5.26; Mature: 5.26
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.1 %Cys (Translated Protein) 3.6 %Met (Translated Protein) 6.7 %Cys+Met (Translated Protein) 3.1 %Cys (Mature Protein) 3.6 %Met (Mature Protein) 6.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVSAPLSFMPEAVIFDMDGLMLDSERVSIECRCRAAFDLEHQIEPDYWLQMVGVSDIACH CCCCCCHHCCCEEEEECCCEEECCCCEEEEEEEEEEECCCCCCCCCHHEEECCCCCEEEE VQLSARIGAVSATALLARSDALYEAVVMKGVPHRPGIVTLLEWLFARGIPCAVGTSTRRP EEEECCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCCEECCCCCCCC LALRKLNTAGLLSRFDVVCTASEVAQAKPAPDIYLLAAHTLGIVPRRCLVVEDSPIGVRA HHHHHCCHHHHHHHHHHEEEHHHHHHCCCCCCEEEEEEHHHCCCCCEEEEEECCCCCHHH ALAAGMTPIQVPDLLMPDAQVSALGHRIVASLTEVQSLLEACFDV HHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure MVSAPLSFMPEAVIFDMDGLMLDSERVSIECRCRAAFDLEHQIEPDYWLQMVGVSDIACH CCCCCCHHCCCEEEEECCCEEECCCCEEEEEEEEEEECCCCCCCCCHHEEECCCCCEEEE VQLSARIGAVSATALLARSDALYEAVVMKGVPHRPGIVTLLEWLFARGIPCAVGTSTRRP EEEECCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCCEECCCCCCCC LALRKLNTAGLLSRFDVVCTASEVAQAKPAPDIYLLAAHTLGIVPRRCLVVEDSPIGVRA HHHHHCCHHHHHHHHHHEEEHHHHHHCCCCCCEEEEEEHHHCCCCCEEEEEECCCCCHHH ALAAGMTPIQVPDLLMPDAQVSALGHRIVASLTEVQSLLEACFDV HHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 10360571 [H]