Definition | Xylella fastidiosa M23 chromosome, complete genome. |
---|---|
Accession | NC_010577 |
Length | 2,535,690 |
Click here to switch to the map view.
The map label for this gene is 182680983
Identifier: 182680983
GI number: 182680983
Start: 527156
End: 527731
Strand: Reverse
Name: 182680983
Synonym: XfasM23_0422
Alternate gene names: NA
Gene position: 527731-527156 (Counterclockwise)
Preceding gene: 182680984
Following gene: 182680982
Centisome position: 20.81
GC content: 50.52
Gene sequence:
>576_bases ATGTCATTGTCTTCCCTATTGCGGCACAACGTACATCTTGCTGCATTCATCATTAGCCTGAGCCTTTTCGGGTACACAGA CCAGGCACACAGTGCCCCCAGTACATTGACCACCTTGCTGGGAAAAGTAGCAGAACGCAACGCAATCGGTGACGAAGTCG CACTCAGCAAATGGGACACTGGTAAACCCGTCCTTGATGCCTCACGCGAAACAGCAGTATTACAAAGCGTACGCGACCAA GCACCGCAGTACAGATTAGACCCAGACTTAGCTGCTCGCTTCTTCTCCGCACAAATTGAGAGCAACAAACTGGTGCAATA TCAACTGCTCAACCGTTGGCAATTACGCGGCAAGGCTCCAAATCGGACGCGACCAAACCTTATCGCTCTGCGTGATCGCC TAGATCACCTGCAAAACGAACTGCTTGACGCACTAGCACAGAGTATGACTCTACGTGAACAGAACAACTGTCCATCTGAG ATTGCCCTTGCCACCGAAGCCTATGCGCGACAATTGAACCTAGACAATCTCCATCATCTCGCATTAATACGCAGTCTCGG TGATTTCTGCCACTGA
Upstream 100 bases:
>100_bases CCTTGAATCCCTTGACATCGGAGATCATTCGACATCGGGAACATAGGACGCTTCACATTGGACAACAACGTTCCCTAATT CATACTGCTAGAGAAAACCC
Downstream 100 bases:
>100_bases ACTCAGTAATGCGACACCGACTGTGCGCTCACCAAGTGAGCCACGACGATGAACCAAGCCGCGGTCGTACTGCCAACCTC CAACACCCTGCTTAACGCCT
Product: chorismate mutase
Products: NA
Alternate protein names: Chorismate Mutase Protein; Secreted Chorismate Mutase; Chorismate Mutase Protein
Number of amino acids: Translated: 191; Mature: 190
Protein sequence:
>191_residues MSLSSLLRHNVHLAAFIISLSLFGYTDQAHSAPSTLTTLLGKVAERNAIGDEVALSKWDTGKPVLDASRETAVLQSVRDQ APQYRLDPDLAARFFSAQIESNKLVQYQLLNRWQLRGKAPNRTRPNLIALRDRLDHLQNELLDALAQSMTLREQNNCPSE IALATEAYARQLNLDNLHHLALIRSLGDFCH
Sequences:
>Translated_191_residues MSLSSLLRHNVHLAAFIISLSLFGYTDQAHSAPSTLTTLLGKVAERNAIGDEVALSKWDTGKPVLDASRETAVLQSVRDQ APQYRLDPDLAARFFSAQIESNKLVQYQLLNRWQLRGKAPNRTRPNLIALRDRLDHLQNELLDALAQSMTLREQNNCPSE IALATEAYARQLNLDNLHHLALIRSLGDFCH >Mature_190_residues SLSSLLRHNVHLAAFIISLSLFGYTDQAHSAPSTLTTLLGKVAERNAIGDEVALSKWDTGKPVLDASRETAVLQSVRDQA PQYRLDPDLAARFFSAQIESNKLVQYQLLNRWQLRGKAPNRTRPNLIALRDRLDHLQNELLDALAQSMTLREQNNCPSEI ALATEAYARQLNLDNLHHLALIRSLGDFCH
Specific function: Unknown
COG id: COG1605
COG function: function code E; Chorismate mutase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 21421; Mature: 21289
Theoretical pI: Translated: 7.71; Mature: 7.71
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 1.0 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 0.5 %Met (Mature Protein) 1.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSLSSLLRHNVHLAAFIISLSLFGYTDQAHSAPSTLTTLLGKVAERNAIGDEVALSKWDT CCHHHHHHHHHHHHHHHHHHHHHCCCCHHCCCHHHHHHHHHHHHHHCCCCCHHHHCCCCC GKPVLDASRETAVLQSVRDQAPQYRLDPDLAARFFSAQIESNKLVQYQLLNRWQLRGKAP CCCCCCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCC NRTRPNLIALRDRLDHLQNELLDALAQSMTLREQNNCPSEIALATEAYARQLNLDNLHHL CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCHHHHH ALIRSLGDFCH HHHHHHHHHCC >Mature Secondary Structure SLSSLLRHNVHLAAFIISLSLFGYTDQAHSAPSTLTTLLGKVAERNAIGDEVALSKWDT CHHHHHHHHHHHHHHHHHHHHHCCCCHHCCCHHHHHHHHHHHHHHCCCCCHHHHCCCCC GKPVLDASRETAVLQSVRDQAPQYRLDPDLAARFFSAQIESNKLVQYQLLNRWQLRGKAP CCCCCCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCC NRTRPNLIALRDRLDHLQNELLDALAQSMTLREQNNCPSEIALATEAYARQLNLDNLHHL CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCHHHHH ALIRSLGDFCH HHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA