Definition | Xylella fastidiosa M23 chromosome, complete genome. |
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Accession | NC_010577 |
Length | 2,535,690 |
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The map label for this gene is 182680940
Identifier: 182680940
GI number: 182680940
Start: 468906
End: 469382
Strand: Direct
Name: 182680940
Synonym: XfasM23_0378
Alternate gene names: NA
Gene position: 468906-469382 (Clockwise)
Preceding gene: 182680939
Following gene: 182680941
Centisome position: 18.49
GC content: 54.72
Gene sequence:
>477_bases ATGCGTGAACTGATCTTGTTGCGTCATGCGCATGCTGAGCCGACTGGTATCGGTCAGACTGATTTTGATCGCTCGCTTTC CCAACAAGGCATGATTGAGGCGGAAGCCGCTGGGCACTGGTTGTGTAAGCAGCATTTGATTCCTGATCGGGTGTTGTGTT CTCCGGCGCGACGTACGCGTGAGACATTGGAGGCAATAGTTGCGGTGCTCGGTGATGTCGAGCAACGCTTAGAGGAGCGC CTCTACGAGGCAACAGTGGGTACTCTGATGGCACTTGCTGATGAGTGCCGTGACGTCGATCGGTTGCTGTTGGTCGGGCA TAATCCCAGCATGGAACGGTTGGTCTCGCTGATACACAGCAACAAGACCAGTGATGACGTTGGGATGTCTACTGGCTCGA TTGCGTTGCTGACGTTGCCATTGAAGACGGGCATTGAACTGGACACTATCTGTCTGACTGCGCTCTGGTGGCCGTGA
Upstream 100 bases:
>100_bases TTACCGTTCTGCTCAGGCGCGCGAGCATCAGCAGGACTGGAAGCCGCTGTTGCAGTGGCTCCATAAGCTGTAGGTGGATC TGTGGATATAGCACGTCGTG
Downstream 100 bases:
>100_bases CGTCATGTCTGCAATGGTATGGATCTCTATTTTGTTTTCCGTGTTACCTGTCTCCTGGGCGACAGCGCAGCAGCGATTGA CGCTGGATTCAGTGCATTCT
Product: putative phosphohistidine phosphatase SixA
Products: NA
Alternate protein names: Phosphohistidine Phosphatase; Phosphoglycerate Mutase Family Protein; Phosphoglycerate Mutase; Phosphohistidine Phosphatase Protein; Phosphohistidine Phosphatase Sixa; Phosphatase; Phosphohistidine Phosphatas; Regulatory Protein
Number of amino acids: Translated: 158; Mature: 158
Protein sequence:
>158_residues MRELILLRHAHAEPTGIGQTDFDRSLSQQGMIEAEAAGHWLCKQHLIPDRVLCSPARRTRETLEAIVAVLGDVEQRLEER LYEATVGTLMALADECRDVDRLLLVGHNPSMERLVSLIHSNKTSDDVGMSTGSIALLTLPLKTGIELDTICLTALWWP
Sequences:
>Translated_158_residues MRELILLRHAHAEPTGIGQTDFDRSLSQQGMIEAEAAGHWLCKQHLIPDRVLCSPARRTRETLEAIVAVLGDVEQRLEER LYEATVGTLMALADECRDVDRLLLVGHNPSMERLVSLIHSNKTSDDVGMSTGSIALLTLPLKTGIELDTICLTALWWP >Mature_158_residues MRELILLRHAHAEPTGIGQTDFDRSLSQQGMIEAEAAGHWLCKQHLIPDRVLCSPARRTRETLEAIVAVLGDVEQRLEER LYEATVGTLMALADECRDVDRLLLVGHNPSMERLVSLIHSNKTSDDVGMSTGSIALLTLPLKTGIELDTICLTALWWP
Specific function: Unknown
COG id: COG2062
COG function: function code T; Phosphohistidine phosphatase SixA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 17549; Mature: 17549
Theoretical pI: Translated: 5.01; Mature: 5.01
Prosite motif: PS00228 TUBULIN_B_AUTOREG
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.5 %Cys (Translated Protein) 3.2 %Met (Translated Protein) 5.7 %Cys+Met (Translated Protein) 2.5 %Cys (Mature Protein) 3.2 %Met (Mature Protein) 5.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRELILLRHAHAEPTGIGQTDFDRSLSQQGMIEAEAAGHWLCKQHLIPDRVLCSPARRTR CCCEEEEECCCCCCCCCCCCHHHHHHHHCCCEEHHHHHHHHHHHHCCCCHHHCCHHHHHH ETLEAIVAVLGDVEQRLEERLYEATVGTLMALADECRDVDRLLLVGHNPSMERLVSLIHS HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEECCCCCHHHHHHHHHC NKTSDDVGMSTGSIALLTLPLKTGIELDTICLTALWWP CCCCCCCCCCCCCEEEEEECCCCCCCHHHHHHHHHCCC >Mature Secondary Structure MRELILLRHAHAEPTGIGQTDFDRSLSQQGMIEAEAAGHWLCKQHLIPDRVLCSPARRTR CCCEEEEECCCCCCCCCCCCHHHHHHHHCCCEEHHHHHHHHHHHHCCCCHHHCCHHHHHH ETLEAIVAVLGDVEQRLEERLYEATVGTLMALADECRDVDRLLLVGHNPSMERLVSLIHS HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEECCCCCHHHHHHHHHC NKTSDDVGMSTGSIALLTLPLKTGIELDTICLTALWWP CCCCCCCCCCCCCEEEEEECCCCCCCHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA