Definition | Xylella fastidiosa M23 chromosome, complete genome. |
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Accession | NC_010577 |
Length | 2,535,690 |
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The map label for this gene is 182680929
Identifier: 182680929
GI number: 182680929
Start: 460497
End: 460820
Strand: Reverse
Name: 182680929
Synonym: XfasM23_0367
Alternate gene names: NA
Gene position: 460820-460497 (Counterclockwise)
Preceding gene: 182680930
Following gene: 182680928
Centisome position: 18.17
GC content: 55.86
Gene sequence:
>324_bases ATGCACCACCCCTCCTGGGATGACCTAGACGCCTTCCTAGAAACCGATGATTTTGCCGTGACAGCCCAATTACACTCGGA GAAAACGGGGCGCGTCCATCAATGCACCATTGTTTTTGACGCGACCTACATTGATGCGGACATCGGCGACTACAGAATGA ACGCCCCAGAACCCTCCTTTACCTGCAAAGAAAGCGATGTTATGGACTTCAAAAAACATGACTACGCCCGCATTGAAGAT CGCCACTACCGCCTCACCCACGACCCACAACCGGATGGAACCGGCATGGCCCTCGTGCGGCTGGCCCCGATGGCGCCCCC ATGA
Upstream 100 bases:
>100_bases CAGTGATCATCGACCCACCCAGCGGCGGAGCACCCACACCAAACACCTTGACCCCTACAGAAACCAACGAGAAACCTGCC CCCCGCGGGAGTCGCCGTTG
Downstream 100 bases:
>100_bases TTGGCATCCACATCCACCCCCACAGCCTCACCGCCATCGCACAAGCACTCAACGCCACTGAAACGCAGATGGAACAGGCC CTGCGTTCGGCCAAAATCAA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 107; Mature: 107
Protein sequence:
>107_residues MHHPSWDDLDAFLETDDFAVTAQLHSEKTGRVHQCTIVFDATYIDADIGDYRMNAPEPSFTCKESDVMDFKKHDYARIED RHYRLTHDPQPDGTGMALVRLAPMAPP
Sequences:
>Translated_107_residues MHHPSWDDLDAFLETDDFAVTAQLHSEKTGRVHQCTIVFDATYIDADIGDYRMNAPEPSFTCKESDVMDFKKHDYARIED RHYRLTHDPQPDGTGMALVRLAPMAPP >Mature_107_residues MHHPSWDDLDAFLETDDFAVTAQLHSEKTGRVHQCTIVFDATYIDADIGDYRMNAPEPSFTCKESDVMDFKKHDYARIED RHYRLTHDPQPDGTGMALVRLAPMAPP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 12236; Mature: 12236
Theoretical pI: Translated: 4.70; Mature: 4.70
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.9 %Cys (Translated Protein) 4.7 %Met (Translated Protein) 6.5 %Cys+Met (Translated Protein) 1.9 %Cys (Mature Protein) 4.7 %Met (Mature Protein) 6.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MHHPSWDDLDAFLETDDFAVTAQLHSEKTGRVHQCTIVFDATYIDADIGDYRMNAPEPSF CCCCCCCCHHHHCCCCCEEEEEEECCCCCCCEEEEEEEEEEEEEECCCCCEECCCCCCCC TCKESDVMDFKKHDYARIEDRHYRLTHDPQPDGTGMALVRLAPMAPP EECCCCCCCCCCCCCEEECCCEEEECCCCCCCCCCEEEEEECCCCCC >Mature Secondary Structure MHHPSWDDLDAFLETDDFAVTAQLHSEKTGRVHQCTIVFDATYIDADIGDYRMNAPEPSF CCCCCCCCHHHHCCCCCEEEEEEECCCCCCCEEEEEEEEEEEEEECCCCCEECCCCCCCC TCKESDVMDFKKHDYARIEDRHYRLTHDPQPDGTGMALVRLAPMAPP EECCCCCCCCCCCCCEEECCCEEEECCCCCCCCCCEEEEEECCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA