Definition | Xylella fastidiosa M23 chromosome, complete genome. |
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Accession | NC_010577 |
Length | 2,535,690 |
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The map label for this gene is 182680920
Identifier: 182680920
GI number: 182680920
Start: 456018
End: 456911
Strand: Reverse
Name: 182680920
Synonym: XfasM23_0358
Alternate gene names: NA
Gene position: 456911-456018 (Counterclockwise)
Preceding gene: 182680921
Following gene: 182680919
Centisome position: 18.02
GC content: 59.62
Gene sequence:
>894_bases ATGGACAACACTCTGACGGCGATTGACATCTCCAAGCTGCCCATGCCTGATGTCATCCGGCAAGTGGCCGCAGACGTGAT CTTGCAAGAGATGCTGGCTGATCTGGCGGCACGTGACCCGACCCTGAAAAACCTCCTGCCCTCAGACCCCATCTACACCC TGTTAGAAGTGGCCGCCTACCGCGAAGCCGTGCGCCGCTATCAAAGCAATGAAGATGCCAAAGCCGTCATGGTGGCCTTG GCCAGCGATGCCGACCTAGATCATTTAGCCGCATTATTTCGCGTCAAGCGCCTCGTGTTGGAGGCAGGTGACCCCACTCA AGGCATCCCCCCGAGGATGGAGAGTGATGCTGCCTTTCGGCGGCGTATCGTCCTTGCACCGGAAGGCTACAGCGTCGCCG GTCCGGAAGGCGCTTACATCTACCATGCCATCAGCGCCCATCCCGACGTACTTGACGTCAGCGCCACCAGCCCAACCCCT GGGGACGTCATCATCACCGTACTATCACGCAGCGCCAACGGACAGCCCTCACAAGACGTGCTTGACGCCGTGATGGCCGC TGTCAACCAAGAATCAGTACGCCCCATGACCGATCACGTGACCGTACAACCGGCACAGATCACTGACTACCAAGTTCACG CACGATTGCACACCTACGCCGGACCGGATGCAGCGGTCGTCCTGTCCGAAGCACACCGCCGCATCACCGCCTACACCACA GACACATTCCGCTTAGGGCGAGATATCGCCCTGAGTGGCCTGTATGCCGGACTGCATGTCGAAGGCATCCAACGCGTAGA ACTCATCACACCACAACAGGGACTGACGATGGACCGTACCCAGGCGGCCCGCTGCACCAACATCACCGTCGTGCATGGTG GCGTGGATGAATGA
Upstream 100 bases:
>100_bases CGGCCCGCGCCACCGCATCGGGCACGGTAACCCTTGTGTTGACTGCCCACTACCTTCCTGAGGGGAAAACCGTCACCCTA GACGGCATCCAGGTGCGTTG
Downstream 100 bases:
>100_bases ACCCCTGCACAGCCTGCTTCCCCCCACGGCAACACCGCTCATGCGCACCCTGGAGCAAGTGATGGCACGCATGGCTGACA TCCCGATCCCATTCAAACAA
Product: baseplate J family protein
Products: NA
Alternate protein names: Baseplate Assembly Protein J; Phage Baseplate Assembly Protein; Baseplate J-Like Protein; Phage-Related Baseplate Assembly Protein; Bacteriophage Baseplate Assembly Protein; Bacteriophage Tail Fiber Protein; Phage Baseplate Assembly Protein J; Pyocin R2_PP Baseplate/Tail Fiber Protein; Bacteriophage Baseplate Assembly Protein J; Phage Baseplate Protein; Phage Baseplate J-Like Protein; Bacteriophage P2 Baseplate Assembly Protein GPJ; Prophage LambdaW5 Baseplate Assembly Protein J; Baseplate Assembly Protein GpJ; Baseplate Assembly Protein J Prophage; Baseplate Assembly-Like Protein; Baseplate Assembly Protein; Bacteriophage Baseplate Protein; Prophage LambdaW1 Baseplate Assembly Protein J; Phage Baseplate Assembly Protein GpJ; Phage Tail Protein; Prophage; GPJ Of Phage P2-Like; Phage P2 Baseplate Assembly Protein; Phage Baseplate-Like Protein; Phage Tail-Like Protein; Bacteriophage Protein; Phage P2 Baseplate Assembly GpJ-Like Protein; Prophage Baseplate Assembly Protein
Number of amino acids: Translated: 297; Mature: 297
Protein sequence:
>297_residues MDNTLTAIDISKLPMPDVIRQVAADVILQEMLADLAARDPTLKNLLPSDPIYTLLEVAAYREAVRRYQSNEDAKAVMVAL ASDADLDHLAALFRVKRLVLEAGDPTQGIPPRMESDAAFRRRIVLAPEGYSVAGPEGAYIYHAISAHPDVLDVSATSPTP GDVIITVLSRSANGQPSQDVLDAVMAAVNQESVRPMTDHVTVQPAQITDYQVHARLHTYAGPDAAVVLSEAHRRITAYTT DTFRLGRDIALSGLYAGLHVEGIQRVELITPQQGLTMDRTQAARCTNITVVHGGVDE
Sequences:
>Translated_297_residues MDNTLTAIDISKLPMPDVIRQVAADVILQEMLADLAARDPTLKNLLPSDPIYTLLEVAAYREAVRRYQSNEDAKAVMVAL ASDADLDHLAALFRVKRLVLEAGDPTQGIPPRMESDAAFRRRIVLAPEGYSVAGPEGAYIYHAISAHPDVLDVSATSPTP GDVIITVLSRSANGQPSQDVLDAVMAAVNQESVRPMTDHVTVQPAQITDYQVHARLHTYAGPDAAVVLSEAHRRITAYTT DTFRLGRDIALSGLYAGLHVEGIQRVELITPQQGLTMDRTQAARCTNITVVHGGVDE >Mature_297_residues MDNTLTAIDISKLPMPDVIRQVAADVILQEMLADLAARDPTLKNLLPSDPIYTLLEVAAYREAVRRYQSNEDAKAVMVAL ASDADLDHLAALFRVKRLVLEAGDPTQGIPPRMESDAAFRRRIVLAPEGYSVAGPEGAYIYHAISAHPDVLDVSATSPTP GDVIITVLSRSANGQPSQDVLDAVMAAVNQESVRPMTDHVTVQPAQITDYQVHARLHTYAGPDAAVVLSEAHRRITAYTT DTFRLGRDIALSGLYAGLHVEGIQRVELITPQQGLTMDRTQAARCTNITVVHGGVDE
Specific function: Unknown
COG id: COG3948
COG function: function code R; Phage-related baseplate assembly protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 32149; Mature: 32149
Theoretical pI: Translated: 4.89; Mature: 4.89
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDNTLTAIDISKLPMPDVIRQVAADVILQEMLADLAARDPTLKNLLPSDPIYTLLEVAAY CCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCCCCCHHHHHHHHHHH REAVRRYQSNEDAKAVMVALASDADLDHLAALFRVKRLVLEAGDPTQGIPPRMESDAAFR HHHHHHHCCCCCHHEEEEEECCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHH RRIVLAPEGYSVAGPEGAYIYHAISAHPDVLDVSATSPTPGDVIITVLSRSANGQPSQDV EEEEECCCCCCCCCCCCCEEEEEECCCCCEEEECCCCCCCCCEEEEEEECCCCCCCHHHH LDAVMAAVNQESVRPMTDHVTVQPAQITDYQVHARLHTYAGPDAAVVLSEAHRRITAYTT HHHHHHHHCHHHCCCCCCCEEECCCCCCCEEEEEEEEECCCCCHHHHHHHHCCEEEEEEC DTFRLGRDIALSGLYAGLHVEGIQRVELITPQQGLTMDRTQAARCTNITVVHGGVDE HHHHHCCHHHHHHHHHCEECCCCCEEEEECCCCCCCCCHHHHCCCCEEEEEECCCCC >Mature Secondary Structure MDNTLTAIDISKLPMPDVIRQVAADVILQEMLADLAARDPTLKNLLPSDPIYTLLEVAAY CCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCCCCCHHHHHHHHHHH REAVRRYQSNEDAKAVMVALASDADLDHLAALFRVKRLVLEAGDPTQGIPPRMESDAAFR HHHHHHHCCCCCHHEEEEEECCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHH RRIVLAPEGYSVAGPEGAYIYHAISAHPDVLDVSATSPTPGDVIITVLSRSANGQPSQDV EEEEECCCCCCCCCCCCCEEEEEECCCCCEEEECCCCCCCCCEEEEEEECCCCCCCHHHH LDAVMAAVNQESVRPMTDHVTVQPAQITDYQVHARLHTYAGPDAAVVLSEAHRRITAYTT HHHHHHHHCHHHCCCCCCCEEECCCCCCCEEEEEEEEECCCCCHHHHHHHHCCEEEEEEC DTFRLGRDIALSGLYAGLHVEGIQRVELITPQQGLTMDRTQAARCTNITVVHGGVDE HHHHHCCHHHHHHHHHCEECCCCCEEEEECCCCCCCCCHHHHCCCCEEEEEECCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA