Definition | Xylella fastidiosa M23 chromosome, complete genome. |
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Accession | NC_010577 |
Length | 2,535,690 |
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The map label for this gene is 182680892
Identifier: 182680892
GI number: 182680892
Start: 428051
End: 428371
Strand: Direct
Name: 182680892
Synonym: XfasM23_0330
Alternate gene names: NA
Gene position: 428051-428371 (Clockwise)
Preceding gene: 182680891
Following gene: 182680893
Centisome position: 16.88
GC content: 45.48
Gene sequence:
>321_bases ATGTCAAAAACACTATACAAAATTATTTTCGTCAACCAGGGCAAGGTATATGAGTTGTACGCCCGTTGTGTGATCAGTAG CCATTTGTGGGGTTTTAACGAGATCAGTGAGTTGGTGTTTGATGTGCATAGTGGGCTTGTGGTCGATCCCACTGAGGAGC AGTTGCGCCATGAATTTGCGAACACTAAAACGCTGCACCTGCCGATGCAAAGTATCGTGCGTATCGAAGAGGTGGATAAG AAAGGCCAATCTGTTATTCGTGATGCTGAAACGGGTGAGAAGGTTGTGACACCTTTCATAACGCCATTCAAACCACGTTG A
Upstream 100 bases:
>100_bases TCGCATTATATGGTGACAATGTGTGTAACAGTACCTGCAAGATGTATCGCTAATACAAAATCAAAATGAAGTGACATGAG ATGGACGTATAATCCATCTC
Downstream 100 bases:
>100_bases TGCCAATGGTTATCTTGTCGCTTATCTTTTACGGCGCGCAATATTTTTTCTTACCTTAACTGATCAATGTATATAGCTTC TCAAGATATCCACGCAGATT
Product: hypothetical protein
Products: NA
Alternate protein names: Protein Conserved In Bacteria
Number of amino acids: Translated: 106; Mature: 105
Protein sequence:
>106_residues MSKTLYKIIFVNQGKVYELYARCVISSHLWGFNEISELVFDVHSGLVVDPTEEQLRHEFANTKTLHLPMQSIVRIEEVDK KGQSVIRDAETGEKVVTPFITPFKPR
Sequences:
>Translated_106_residues MSKTLYKIIFVNQGKVYELYARCVISSHLWGFNEISELVFDVHSGLVVDPTEEQLRHEFANTKTLHLPMQSIVRIEEVDK KGQSVIRDAETGEKVVTPFITPFKPR >Mature_105_residues SKTLYKIIFVNQGKVYELYARCVISSHLWGFNEISELVFDVHSGLVVDPTEEQLRHEFANTKTLHLPMQSIVRIEEVDKK GQSVIRDAETGEKVVTPFITPFKPR
Specific function: Unknown
COG id: COG4517
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 12205; Mature: 12074
Theoretical pI: Translated: 6.96; Mature: 6.96
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSKTLYKIIFVNQGKVYELYARCVISSHLWGFNEISELVFDVHSGLVVDPTEEQLRHEFA CCCCEEEEEEECCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCEEECCCHHHHHHHHC NTKTLHLPMQSIVRIEEVDKKGQSVIRDAETGEKVVTPFITPFKPR CCCEEEECHHHHHHHHHHHHHHHHHHHCCCCCCEEECCCCCCCCCC >Mature Secondary Structure SKTLYKIIFVNQGKVYELYARCVISSHLWGFNEISELVFDVHSGLVVDPTEEQLRHEFA CCCEEEEEEECCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCEEECCCHHHHHHHHC NTKTLHLPMQSIVRIEEVDKKGQSVIRDAETGEKVVTPFITPFKPR CCCEEEECHHHHHHHHHHHHHHHHHHHCCCCCCEEECCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA