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The map label for this gene is ybdA [C]

Identifier: 182680842

GI number: 182680842

Start: 362524

End: 363780

Strand: Reverse

Name: ybdA [C]

Synonym: XfasM23_0279

Alternate gene names: 182680842

Gene position: 363780-362524 (Counterclockwise)

Preceding gene: 182680843

Following gene: 182680840

Centisome position: 14.35

GC content: 56.01

Gene sequence:

>1257_bases
ATGAGCACATCCCCTTCCTCCAACGCAACGCTGCGCACGCTGCTATGCCGTCCTGGTTTCACGGCGGTGCTGGCCTATCG
CATCGCTGCAACGCTGTCTCACCAAATCGTGTCCGTGACGATCGGCTGGCATATTTACGAGATCACGCGTAACCCACTTT
TACTCGGTCTGGTCGCTCTGGCTGAGATTCTTCCGTTTTTCTGCATCGCTCCATTCGCTGGTTATTTGGTCGACCATCTA
CCACGGCGTCGGCTGGGAATGTTCGCAAGTCTCGGCTTGGCAATGACTCCAACAATTTTACTGATAGCCGCATTCAACAC
GGCACCAGTAACGGCACCAGTACAGACTACTTGGCCAATCTACGTTGCGGCCAGTTTGAGTGGCATGGTGCGTTCTTTCA
TCGTCCCGGTGTACAACGCGCTGTTTGCACGTGTGCTGCCACGAGAAGACTATGCACGTGGTGCTGGACTTGGCACTGTA
GCATTCCAGGCTAGTTTGGTGCTCAGTCCCATGCTGGGAGGCATCTTGATCGCTTTGGGCGGCAAAGAACTAGCTTATGC
TGCCGGAGTGGTCGCAGCCATCATCGCGCTGCTTGCACTGGCATTGCTGCGGGTTGAAGAACCCGCAGTCGATAAACCAC
GTGCCCCAGTATTGGGCAGCATCGCCGAGGGCGTGCGCTTTGTGTTCTCCAATCAGATCATGCTTGGTGCGATGGCACTG
GACATGTTCTCCGTGCTGTTGGGGGGTGCCGTGTCGATGCTGCCGGCGTTCATCCAGGATATTTTTCACTATGGTCCGGA
GGGTCTGGGCATTTTGCGTGGCACGCCGGCGCTGGGTTCAGTACTGGCGGGGCTATGGCTGGCAAGGTATCCGCTACAAC
GTCACGCAGGACGCACCTTATTGCTGGCAGTCGCCGGATTCGGGATATGTACGATCGCGTTCGGTCTGTCCCAACACTTT
TGGGTGTCAGCGGGGATACTTCTGGTTTATGGGGCATGCGACGGGATTTCTGTCGTCTCGCGCGCGTCAATCCTGCAATT
GGTCACACCAGATGAGATGCGCGGTCGGGTCTCGTCAATCAATAGCATCTTCATTGGTTCGTCTAATGAGCTGGGCGCAT
TCTATGACGGAGTCATGGCACGTTTTATCGGCCTGGTACACGCTGTGGTTCTGGGCGGCTTTATGACATTGGTTGTCGTT
GGCATCACGGCACTGAAGGCACCGCGGTTACGCCGGTTGGATCTACGCGATCTGTAA

Upstream 100 bases:

>100_bases
TCACCGATATCGGCCTCGCCAAACACCTGTCGCCAACACGTAATAATGGTTTGGCAGCAATGCTCGACTTGATTCGCAAT
ACAGCGCAAGCACTTACCGC

Downstream 100 bases:

>100_bases
CAAGCTAATGAGTGGCATGGTCGATGTTCTGCCCTTTTGTGCCAGCACTGATCGGGCAGTTGGTCGATATCCGGGGAGGC
GGCAGAGTGGGCGGTGATGT

Product: major facilitator transporter

Products: NA

Alternate protein names: Facilitator Superfamily Protein; Facilitator Superfamily Permease; DrugProton Antiporter; MFS Permease; Membrane Transporter; Facilitator Superfamily Transporter; Transporter Facilitator Family; Transmembrane Protein; Permease Of Facilitator Superfamily; MFS Family Transporter; Facilitator Superfamily Transporter Permease; Permease; Facilitator Superfamily; Macrolide-Efflux Protein; Integral Membrane Protein; Facilitator MFS1 Protein; Permease Protein; Permease Facilitator Superfamily; Integral Membrane Protein MFS Transporter; Enterobactin Exporter EntS; Siderophore Export Protein; Mfs Transporter; Permease MDR ; Facilitator Superfamily Transmembrane Transporter; Membrame Protein; Facilitator Superfamily Multidrug Efflux Transporter; Arabinose Efflux Permease; Permease Of Facilitator Superfamily Protein; DrugH+ Antiporter; Facilitator Family Transporter; Facilitator Superfamily Multidrug Resistance Protein; Drug Resistance Efflux Protein; Drug Proton Antiporter; Facilitator Superfamily Transporter Transporter; Permeases Of Facilitator Superfamily; Permeases Of Facilitator Superfamily Protein

Number of amino acids: Translated: 418; Mature: 417

Protein sequence:

>418_residues
MSTSPSSNATLRTLLCRPGFTAVLAYRIAATLSHQIVSVTIGWHIYEITRNPLLLGLVALAEILPFFCIAPFAGYLVDHL
PRRRLGMFASLGLAMTPTILLIAAFNTAPVTAPVQTTWPIYVAASLSGMVRSFIVPVYNALFARVLPREDYARGAGLGTV
AFQASLVLSPMLGGILIALGGKELAYAAGVVAAIIALLALALLRVEEPAVDKPRAPVLGSIAEGVRFVFSNQIMLGAMAL
DMFSVLLGGAVSMLPAFIQDIFHYGPEGLGILRGTPALGSVLAGLWLARYPLQRHAGRTLLLAVAGFGICTIAFGLSQHF
WVSAGILLVYGACDGISVVSRASILQLVTPDEMRGRVSSINSIFIGSSNELGAFYDGVMARFIGLVHAVVLGGFMTLVVV
GITALKAPRLRRLDLRDL

Sequences:

>Translated_418_residues
MSTSPSSNATLRTLLCRPGFTAVLAYRIAATLSHQIVSVTIGWHIYEITRNPLLLGLVALAEILPFFCIAPFAGYLVDHL
PRRRLGMFASLGLAMTPTILLIAAFNTAPVTAPVQTTWPIYVAASLSGMVRSFIVPVYNALFARVLPREDYARGAGLGTV
AFQASLVLSPMLGGILIALGGKELAYAAGVVAAIIALLALALLRVEEPAVDKPRAPVLGSIAEGVRFVFSNQIMLGAMAL
DMFSVLLGGAVSMLPAFIQDIFHYGPEGLGILRGTPALGSVLAGLWLARYPLQRHAGRTLLLAVAGFGICTIAFGLSQHF
WVSAGILLVYGACDGISVVSRASILQLVTPDEMRGRVSSINSIFIGSSNELGAFYDGVMARFIGLVHAVVLGGFMTLVVV
GITALKAPRLRRLDLRDL
>Mature_417_residues
STSPSSNATLRTLLCRPGFTAVLAYRIAATLSHQIVSVTIGWHIYEITRNPLLLGLVALAEILPFFCIAPFAGYLVDHLP
RRRLGMFASLGLAMTPTILLIAAFNTAPVTAPVQTTWPIYVAASLSGMVRSFIVPVYNALFARVLPREDYARGAGLGTVA
FQASLVLSPMLGGILIALGGKELAYAAGVVAAIIALLALALLRVEEPAVDKPRAPVLGSIAEGVRFVFSNQIMLGAMALD
MFSVLLGGAVSMLPAFIQDIFHYGPEGLGILRGTPALGSVLAGLWLARYPLQRHAGRTLLLAVAGFGICTIAFGLSQHFW
VSAGILLVYGACDGISVVSRASILQLVTPDEMRGRVSSINSIFIGSSNELGAFYDGVMARFIGLVHAVVLGGFMTLVVVG
ITALKAPRLRRLDLRDL

Specific function: Unknown

COG id: COG0477

COG function: function code GEPR; Permeases of the major facilitator superfamily

Gene ontology:

Cell location: Integral Membrane Protein [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 44285; Mature: 44154

Theoretical pI: Translated: 9.84; Mature: 9.84

Prosite motif: PS50850 MFS

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSTSPSSNATLRTLLCRPGFTAVLAYRIAATLSHQIVSVTIGWHIYEITRNPLLLGLVAL
CCCCCCCCCHHHHEEECCCHHHHHHHHHHHHHHHHHEEEEECEEEEEECCCHHHHHHHHH
AEILPFFCIAPFAGYLVDHLPRRRLGMFASLGLAMTPTILLIAAFNTAPVTAPVQTTWPI
HHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCHHHHHHHHEEEECCCCCCCCCCCCCCHH
YVAASLSGMVRSFIVPVYNALFARVLPREDYARGAGLGTVAFQASLVLSPMLGGILIALG
HHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCCCCCHHHHHHHHHHHHHHHHHEEEEEC
GKELAYAAGVVAAIIALLALALLRVEEPAVDKPRAPVLGSIAEGVRFVFSNQIMLGAMAL
CCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHCHHHHHHHHH
DMFSVLLGGAVSMLPAFIQDIFHYGPEGLGILRGTPALGSVLAGLWLARYPLQRHAGRTL
HHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCHHHHHHHHHHHHHCCHHHHCCCEE
LLAVAGFGICTIAFGLSQHFWVSAGILLVYGACDGISVVSRASILQLVTPDEMRGRVSSI
EHHHHHHHHHHHHHHHHHHHHHHHCEEEEEECCCCHHHHHHHHHHEECCCHHHHHHHHHC
NSIFIGSSNELGAFYDGVMARFIGLVHAVVLGGFMTLVVVGITALKAPRLRRLDLRDL
CEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCC
>Mature Secondary Structure 
STSPSSNATLRTLLCRPGFTAVLAYRIAATLSHQIVSVTIGWHIYEITRNPLLLGLVAL
CCCCCCCCHHHHEEECCCHHHHHHHHHHHHHHHHHEEEEECEEEEEECCCHHHHHHHHH
AEILPFFCIAPFAGYLVDHLPRRRLGMFASLGLAMTPTILLIAAFNTAPVTAPVQTTWPI
HHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCHHHHHHHHEEEECCCCCCCCCCCCCCHH
YVAASLSGMVRSFIVPVYNALFARVLPREDYARGAGLGTVAFQASLVLSPMLGGILIALG
HHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCCCCCHHHHHHHHHHHHHHHHHEEEEEC
GKELAYAAGVVAAIIALLALALLRVEEPAVDKPRAPVLGSIAEGVRFVFSNQIMLGAMAL
CCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHCHHHHHHHHH
DMFSVLLGGAVSMLPAFIQDIFHYGPEGLGILRGTPALGSVLAGLWLARYPLQRHAGRTL
HHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCHHHHHHHHHHHHHCCHHHHCCCEE
LLAVAGFGICTIAFGLSQHFWVSAGILLVYGACDGISVVSRASILQLVTPDEMRGRVSSI
EHHHHHHHHHHHHHHHHHHHHHHHCEEEEEECCCCHHHHHHHHHHEECCCHHHHHHHHHC
NSIFIGSSNELGAFYDGVMARFIGLVHAVVLGGFMTLVVVGITALKAPRLRRLDLRDL
CEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: NA