Definition | Xylella fastidiosa M23 chromosome, complete genome. |
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Accession | NC_010577 |
Length | 2,535,690 |
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The map label for this gene is 182680736
Identifier: 182680736
GI number: 182680736
Start: 225928
End: 227754
Strand: Direct
Name: 182680736
Synonym: XfasM23_0165
Alternate gene names: NA
Gene position: 225928-227754 (Clockwise)
Preceding gene: 182680735
Following gene: 182680737
Centisome position: 8.91
GC content: 56.76
Gene sequence:
>1827_bases ATGCCGTCGATCTGCACTCTTGCTGTCTCGCTGTTGTCTGTGGTGCTGCTGTCGGCGTGCACTAGTTCTAGTTCACTTAG CAGGAGTGATACCCGTGATTGCCGTGTGATTCCGTCTGAGCAGGCGGCCCGTGCCTTCGATCAGTTGCTCAATGAGCAGT GGCAGTACGAGCTTGCCCATAGTCCTGAGTTTGCCAGCATCATCGGGGATAAGCGGTACAACGATCGTTGGAGTGACTAT TCGTCTGCTGCAGTTGCTGCAGACCGTCAGGCGACTGTGGGGTTTTTGGCAAAGTTTCAGAAGGTCAATGCGGCTGCGCT TGATGGGCAGCGCCAACTGAGTTTGATATTGATGCAGCGCCAGTTGCAGGACCATCTGGAGGCAATCCGGCTGAGGTTGC ACGAGATGCTGTTAGAGCCTGTTGGCGGTGTTCATTTGGAACTTGCCAGTGATGCCGACATGTTCCCATTTGATGACATC AAGGATTATCGGGATTACATCAAGCGCTTGCAGCGGGTGCCTGCGCTGATTGATCAGGTGATTGAGATTTCGCGCCAGGG TGCGCAGGACGGTCTGACGCAGCCGCGTTATCTATTGGAGACGCTCCCGGCACAGATTCGCAAGATTGCTGAGGCGGCGG GTGCCGACAGTCCATTCGCTTCGCCATTGAAGACGCTTGATCAAGTGGTCACGGATGCAGCGCAGCGTGCGCAATTGCGT GCGGCGCTGATCACTGCGATAGATCAGCAGGTACGTCCGGCGTATGAAACGCTGGCAGCGTTTGTGCAGAACGAGTATGC GGCGAAGGGCCGTGAGCACGAGGGGCTATGGTCGTTGCCGGATGGGGAGGCACGCTATCGTTTTGCAATTCACACGCAGA CCACCACTGACCGTTCTCCGGAGGACATTCATCGCATTGGTCTGCGTGAGGTTGCACGGATTGAGGGTGAGATGACTGCA ATCGCGATCTCAATCGGTTACAAGGACTTGGCTAGCTTCCGCAAGGCGGTGGCGAATGATAAGGCGCATTTTGCGGAGGA TGATGAGCAGATCCTCGGTTTGTATCGCGGTTACATCGCTGGCATGCAGGTGGCGTTGCCTAAGCTGTTTGAGGATGGTG ATTTGCCGAAGACTCCGCTGGAGGTGCGGGCAATGCCAGCGTTCCGCCGCCAGGCGCCCGGTGCCGAATATTTGCAGGGC ACTCCGGAAGGGAGCAAGCCGGCTATTGTGATGGTCAACACCAACGATGCGATTGAGCGTACGTTGGTTAATGTCGAGAC AACGGCCTACCATGAGGGGGTGCCAGGGCATCACTTGCAAATCTCGTTGGCGCAGAGGTTGCCACTGCCGCCGTTTCGGC AGCATGCGGGTTACAACGCGTATGTTGAAGGATGGGCGTTGTACGCTGAGCGCTTGGGTAAGGAGGCCGGTTTCTTCAAA GACCCTTACAGTGATTATGGGCGCTTGGCGGGGGAGCTGTTGCGCGCTAATCGCTTGGTATTGGATACGGGGGTGCACTA TAAGCGCTGGACGCGGCAGCAGATGGTCGATTTTTTCCATGCGCACCCGTCCGATGATGAGCCGAGCATTCAGGCGGAGA CGGATCGTTACATTGTCTGGCCGGGGCAGGCGTTGGGCTACAAGCTGGGTGAGATGCAGATCCTAAGGTTGCGTGCTAAG GCTGAGAAGGTTCTCGGTGCCCGGTTCGATCTCCGAGCATTTCATGATGCGGTGTTGGGTGGTGGTGCGATGCCTTTGGA TGTGTTGGCGCAGCGGATTGATGCGTGGATTGCTCAAGTGCAGGGTGTGCAGCAGGCGAAGCGATGA
Upstream 100 bases:
>100_bases CCTTTGCTTCTTTATCTGCTTGGGGTGAGAGGATGTCTTGAGGGTATAGATGAGAACTTCCACGCAAAGAGCCGTACATT AAATTTTGGGAATTAATTGC
Downstream 100 bases:
>100_bases TGCGGTGTATTCGTCTGTTCTGGATCGCTTTGCTGGTGATGGCTGTGACTGTGAGTGTTGCTCAGGCGACACCGGCGCCA TTTGATATGGCTGCGCGTTT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 608; Mature: 607
Protein sequence:
>608_residues MPSICTLAVSLLSVVLLSACTSSSSLSRSDTRDCRVIPSEQAARAFDQLLNEQWQYELAHSPEFASIIGDKRYNDRWSDY SSAAVAADRQATVGFLAKFQKVNAAALDGQRQLSLILMQRQLQDHLEAIRLRLHEMLLEPVGGVHLELASDADMFPFDDI KDYRDYIKRLQRVPALIDQVIEISRQGAQDGLTQPRYLLETLPAQIRKIAEAAGADSPFASPLKTLDQVVTDAAQRAQLR AALITAIDQQVRPAYETLAAFVQNEYAAKGREHEGLWSLPDGEARYRFAIHTQTTTDRSPEDIHRIGLREVARIEGEMTA IAISIGYKDLASFRKAVANDKAHFAEDDEQILGLYRGYIAGMQVALPKLFEDGDLPKTPLEVRAMPAFRRQAPGAEYLQG TPEGSKPAIVMVNTNDAIERTLVNVETTAYHEGVPGHHLQISLAQRLPLPPFRQHAGYNAYVEGWALYAERLGKEAGFFK DPYSDYGRLAGELLRANRLVLDTGVHYKRWTRQQMVDFFHAHPSDDEPSIQAETDRYIVWPGQALGYKLGEMQILRLRAK AEKVLGARFDLRAFHDAVLGGGAMPLDVLAQRIDAWIAQVQGVQQAKR
Sequences:
>Translated_608_residues MPSICTLAVSLLSVVLLSACTSSSSLSRSDTRDCRVIPSEQAARAFDQLLNEQWQYELAHSPEFASIIGDKRYNDRWSDY SSAAVAADRQATVGFLAKFQKVNAAALDGQRQLSLILMQRQLQDHLEAIRLRLHEMLLEPVGGVHLELASDADMFPFDDI KDYRDYIKRLQRVPALIDQVIEISRQGAQDGLTQPRYLLETLPAQIRKIAEAAGADSPFASPLKTLDQVVTDAAQRAQLR AALITAIDQQVRPAYETLAAFVQNEYAAKGREHEGLWSLPDGEARYRFAIHTQTTTDRSPEDIHRIGLREVARIEGEMTA IAISIGYKDLASFRKAVANDKAHFAEDDEQILGLYRGYIAGMQVALPKLFEDGDLPKTPLEVRAMPAFRRQAPGAEYLQG TPEGSKPAIVMVNTNDAIERTLVNVETTAYHEGVPGHHLQISLAQRLPLPPFRQHAGYNAYVEGWALYAERLGKEAGFFK DPYSDYGRLAGELLRANRLVLDTGVHYKRWTRQQMVDFFHAHPSDDEPSIQAETDRYIVWPGQALGYKLGEMQILRLRAK AEKVLGARFDLRAFHDAVLGGGAMPLDVLAQRIDAWIAQVQGVQQAKR >Mature_607_residues PSICTLAVSLLSVVLLSACTSSSSLSRSDTRDCRVIPSEQAARAFDQLLNEQWQYELAHSPEFASIIGDKRYNDRWSDYS SAAVAADRQATVGFLAKFQKVNAAALDGQRQLSLILMQRQLQDHLEAIRLRLHEMLLEPVGGVHLELASDADMFPFDDIK DYRDYIKRLQRVPALIDQVIEISRQGAQDGLTQPRYLLETLPAQIRKIAEAAGADSPFASPLKTLDQVVTDAAQRAQLRA ALITAIDQQVRPAYETLAAFVQNEYAAKGREHEGLWSLPDGEARYRFAIHTQTTTDRSPEDIHRIGLREVARIEGEMTAI AISIGYKDLASFRKAVANDKAHFAEDDEQILGLYRGYIAGMQVALPKLFEDGDLPKTPLEVRAMPAFRRQAPGAEYLQGT PEGSKPAIVMVNTNDAIERTLVNVETTAYHEGVPGHHLQISLAQRLPLPPFRQHAGYNAYVEGWALYAERLGKEAGFFKD PYSDYGRLAGELLRANRLVLDTGVHYKRWTRQQMVDFFHAHPSDDEPSIQAETDRYIVWPGQALGYKLGEMQILRLRAKA EKVLGARFDLRAFHDAVLGGGAMPLDVLAQRIDAWIAQVQGVQQAKR
Specific function: Unknown
COG id: COG4805
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 67911; Mature: 67780
Theoretical pI: Translated: 6.32; Mature: 6.32
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPSICTLAVSLLSVVLLSACTSSSSLSRSDTRDCRVIPSEQAARAFDQLLNEQWQYELAH CCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEECCCHHHHHHHHHHHHHHHCCHHCC SPEFASIIGDKRYNDRWSDYSSAAVAADRQATVGFLAKFQKVNAAALDGQRQLSLILMQR CCCHHHHHCCCCCCCCCCCCCHHHHHCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHH QLQDHLEAIRLRLHEMLLEPVGGVHLELASDADMFPFDDIKDYRDYIKRLQRVPALIDQV HHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH IEISRQGAQDGLTQPRYLLETLPAQIRKIAEAAGADSPFASPLKTLDQVVTDAAQRAQLR HHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHH AALITAIDQQVRPAYETLAAFVQNEYAAKGREHEGLWSLPDGEARYRFAIHTQTTTDRSP HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEEEEEECCCCCCCH EDIHRIGLREVARIEGEMTAIAISIGYKDLASFRKAVANDKAHFAEDDEQILGLYRGYIA HHHHHHHHHHHHHHCCCEEEEEEECCHHHHHHHHHHHHCCCHHCCCCHHHHHHHHHHHHH GMQVALPKLFEDGDLPKTPLEVRAMPAFRRQAPGAEYLQGTPEGSKPAIVMVNTNDAIER HHHHHHHHHHCCCCCCCCCHHHHCCCHHHHCCCCHHHHCCCCCCCCCEEEEECCCHHHHH TLVNVETTAYHEGVPGHHLQISLAQRLPLPPFRQHAGYNAYVEGWALYAERLGKEAGFFK HHHCCCHHHHCCCCCCCEEEEEHHHCCCCCCHHHHCCCCHHHHHHHHHHHHHCHHCCCCC DPYSDYGRLAGELLRANRLVLDTGVHYKRWTRQQMVDFFHAHPSDDEPSIQAETDRYIVW CCHHHHHHHHHHHHHHCCEEEECCCCHHHHHHHHHHHHHHCCCCCCCCCCEECCCCEEEE PGQALGYKLGEMQILRLRAKAEKVLGARFDLRAFHDAVLGGGAMPLDVLAQRIDAWIAQV CCHHHCCHHCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHH QGVQQAKR HHHHHHCC >Mature Secondary Structure PSICTLAVSLLSVVLLSACTSSSSLSRSDTRDCRVIPSEQAARAFDQLLNEQWQYELAH CHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEECCCHHHHHHHHHHHHHHHCCHHCC SPEFASIIGDKRYNDRWSDYSSAAVAADRQATVGFLAKFQKVNAAALDGQRQLSLILMQR CCCHHHHHCCCCCCCCCCCCCHHHHHCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHH QLQDHLEAIRLRLHEMLLEPVGGVHLELASDADMFPFDDIKDYRDYIKRLQRVPALIDQV HHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH IEISRQGAQDGLTQPRYLLETLPAQIRKIAEAAGADSPFASPLKTLDQVVTDAAQRAQLR HHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHH AALITAIDQQVRPAYETLAAFVQNEYAAKGREHEGLWSLPDGEARYRFAIHTQTTTDRSP HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEEEEEECCCCCCCH EDIHRIGLREVARIEGEMTAIAISIGYKDLASFRKAVANDKAHFAEDDEQILGLYRGYIA HHHHHHHHHHHHHHCCCEEEEEEECCHHHHHHHHHHHHCCCHHCCCCHHHHHHHHHHHHH GMQVALPKLFEDGDLPKTPLEVRAMPAFRRQAPGAEYLQGTPEGSKPAIVMVNTNDAIER HHHHHHHHHHCCCCCCCCCHHHHCCCHHHHCCCCHHHHCCCCCCCCCEEEEECCCHHHHH TLVNVETTAYHEGVPGHHLQISLAQRLPLPPFRQHAGYNAYVEGWALYAERLGKEAGFFK HHHCCCHHHHCCCCCCCEEEEEHHHCCCCCCHHHHCCCCHHHHHHHHHHHHHCHHCCCCC DPYSDYGRLAGELLRANRLVLDTGVHYKRWTRQQMVDFFHAHPSDDEPSIQAETDRYIVW CCHHHHHHHHHHHHHHCCEEEECCCCHHHHHHHHHHHHHHCCCCCCCCCCEECCCCEEEE PGQALGYKLGEMQILRLRAKAEKVLGARFDLRAFHDAVLGGGAMPLDVLAQRIDAWIAQV CCHHHCCHHCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHH QGVQQAKR HHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA