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The map label for this gene is ybbJ [H]

Identifier: 182680708

GI number: 182680708

Start: 192697

End: 193128

Strand: Reverse

Name: ybbJ [H]

Synonym: XfasM23_0137

Alternate gene names: 182680708

Gene position: 193128-192697 (Counterclockwise)

Preceding gene: 182680709

Following gene: 182680707

Centisome position: 7.62

GC content: 50.46

Gene sequence:

>432_bases
ATGCGCTGGGATGCTATGGGATGGGCAGCTGCCGCACTGCTATTGCTCGCTGCCGAAACACTGATACCTGGAGCGTTCAT
GCTATGGATGGGGATTGCAGCAGCAGCTGTGTTCGTCGGCGTGCTGCTGCTCCCGGATATTTCACTGCTACTGCAAATGT
TCGCTTTTGTTGTTCTTAGCTTCGTTTCAATCTATCTCTACCGGACTTGGTTCCGCCATATCGATCATGACAGTGACCAT
CCGCTGCTAAATCGCCGTGCTGATCAGCTAGTCGGTCGTATCATCATCCTTGATCACGCTATCGTTGACGGCAACGCTCG
AATCAAAATAGACGACACATTTTGGGATATCACTGGTCCTGATTTACCCATCGGCACTCAAATCCGGATCGTTGCTTTAG
ATGGCACAACACTCAAGGTACACCCCACTTAA

Upstream 100 bases:

>100_bases
CATCGGCTCAATCGCCGGCATTGCCGACTTGACCAGAGAAGCATTAGGTAAATCGGATCATAGTGCGACACCGTCTCAAC
GACCACACCGAGGCTGAGTG

Downstream 100 bases:

>100_bases
AGACACAAAATACGTATGAAGTCACACCATGGCATCCATTGCCATTTGGTGTGACTGGCGCCCCTAGCATGGCAACTCAG
ACCTAAATACCGCACAGCCG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 143; Mature: 143

Protein sequence:

>143_residues
MRWDAMGWAAAALLLLAAETLIPGAFMLWMGIAAAAVFVGVLLLPDISLLLQMFAFVVLSFVSIYLYRTWFRHIDHDSDH
PLLNRRADQLVGRIIILDHAIVDGNARIKIDDTFWDITGPDLPIGTQIRIVALDGTTLKVHPT

Sequences:

>Translated_143_residues
MRWDAMGWAAAALLLLAAETLIPGAFMLWMGIAAAAVFVGVLLLPDISLLLQMFAFVVLSFVSIYLYRTWFRHIDHDSDH
PLLNRRADQLVGRIIILDHAIVDGNARIKIDDTFWDITGPDLPIGTQIRIVALDGTTLKVHPT
>Mature_143_residues
MRWDAMGWAAAALLLLAAETLIPGAFMLWMGIAAAAVFVGVLLLPDISLLLQMFAFVVLSFVSIYLYRTWFRHIDHDSDH
PLLNRRADQLVGRIIILDHAIVDGNARIKIDDTFWDITGPDLPIGTQIRIVALDGTTLKVHPT

Specific function: Unknown

COG id: COG1585

COG function: function code OU; Membrane protein implicated in regulation of membrane protease activity

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: To M.jannaschii MJ0826 [H]

Homologues:

Organism=Escherichia coli, GI145693099, Length=138, Percent_Identity=31.8840579710145, Blast_Score=70, Evalue=4e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR012340
- InterPro:   IPR002810 [H]

Pfam domain/function: PF01957 NfeD [H]

EC number: NA

Molecular weight: Translated: 15918; Mature: 15918

Theoretical pI: Translated: 5.96; Mature: 5.96

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.5 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.5 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRWDAMGWAAAALLLLAAETLIPGAFMLWMGIAAAAVFVGVLLLPDISLLLQMFAFVVLS
CCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHH
FVSIYLYRTWFRHIDHDSDHPLLNRRADQLVGRIIILDHAIVDGNARIKIDDTFWDITGP
HHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHEEEEEEECCCCEEEECCCEEECCCC
DLPIGTQIRIVALDGTTLKVHPT
CCCCCCEEEEEEECCCEEEEECC
>Mature Secondary Structure
MRWDAMGWAAAALLLLAAETLIPGAFMLWMGIAAAAVFVGVLLLPDISLLLQMFAFVVLS
CCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHH
FVSIYLYRTWFRHIDHDSDHPLLNRRADQLVGRIIILDHAIVDGNARIKIDDTFWDITGP
HHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHEEEEEEECCCCEEEECCCEEECCCC
DLPIGTQIRIVALDGTTLKVHPT
CCCCCCEEEEEEECCCEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9278503 [H]