Definition | Xylella fastidiosa M23 chromosome, complete genome. |
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Accession | NC_010577 |
Length | 2,535,690 |
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The map label for this gene is rfaG [C]
Identifier: 182680639
GI number: 182680639
Start: 97479
End: 98609
Strand: Direct
Name: rfaG [C]
Synonym: XfasM23_0068
Alternate gene names: 182680639
Gene position: 97479-98609 (Clockwise)
Preceding gene: 182680638
Following gene: 182680640
Centisome position: 3.84
GC content: 56.85
Gene sequence:
>1131_bases ATGTTTGTCTTGCCGACGCGTCGTCTCACCGTCGTACAGCTACTGCCAGCACTATGTTCCGGTGGCGTCGAACGCTCAAC CTTGGAAGTTGCCGCAGCGCTGGTGCAGGCTGGACACCGGGCGATTGTTGTCTCGGCGGGCGGACCTTTGGTCGCATTCC TGCTCAGCATCGGTGCTGAGCACATCACCTTGGATATTGGCCGTAAATCATTGCTGACACTACGTCACATTGCTGCGCTG CGTCGCTTGTTTGCCCAGTTACGCCCGGACATTGTGCATGCACGTTCGCGGTTACCTGCGTGGCTGACTTGGTATGCATT GCATGGTCTTTTCTTTTCCCCAAAGCCGCGATTTGTCACGACGGTTCATGGTCTCAATGCGCCGAACCCCTACAGTGCCG TTATGACCTATGGAGAGCGGGTGATTTGTGTTTCAAACGTTGTGCATGATTATGTACTCCGGCATTACCGCCGTACCGAT CCGCAGCGACTGCGTACCATCCCGCGCGGCGTCGACCTTGCCAGGTTCCGACGCCGACCGTATCCGGATCGCTCCGCGCG TCGTTGGGCCAGGAAATATGTCCCGTGTTTAGATGACAACACCCGTTTGTTGCTGATGCCCGGTCGCGGCACCAGGTTGA AAGGGCATGGTGATGCGCTGCTTTTGCTGGCTTTTTTACGGCGTGTTTTCCACTACAACATCTGCTTGTGGCTGCCTGGT GCGTGTCAACCAGGCCGTGAATCTTACCTGGCTGAGCTGGAAGCCCAAGCTCGCGAGCTGGGGGTGACCGATTGCGTAGT ATTTACTCCGCCGACTGAGCATATCGTTGAAGCCTATGCGGCCAGCGACCTAGTGTTGCAACTGTCGCGCAAACCTGAAG CATTCGGCCGTACCGTGCTTGAAGCACTCGCGGTTGGTCGCACCGTGCTCGGCTGGAATCATGGAGGTGTTGGCGAATTA CTCACCCAGTTACAGCCTGATGGTGCCGTCTCCCCATTCGATACAGCCGTACTGCAGCGGCGTGCTGCAATGCTGTTGAT GCATTCCCCTGAGCTACCTCCGGACATTCCTTACACGTTGCAGACGATGCAATCGGCCACGTTGCAGGTGTATGACGAAC TCTGCACCTGA
Upstream 100 bases:
>100_bases ATGGAACTCACACCCGCGGGTCTATCTGCCGATAGAGGATGAACCGAATGGCGAGGTCACCTGCCCCTACTGTGGGGCCG TCTACACGTTAATTGACTGA
Downstream 100 bases:
>100_bases CATTGTGAGCATCTCTAAGCCAGCATTGCTGCTTGATGTTGGCCGTTGGGCACCGGTATGCGTGGTGGTGTTCGTGGCCT TTTGGCCATTACCAGGATTA
Product: group 1 glycosyl transferase
Products: NA
Alternate protein names: Glycosyl Transferase Group 1 Family Protein; Glycosyl Transferase; Group 1 Glycosyl Transferase; Lipopolysaccharide Biosynthesis Protein; Glycosyltransferase Protein
Number of amino acids: Translated: 376; Mature: 376
Protein sequence:
>376_residues MFVLPTRRLTVVQLLPALCSGGVERSTLEVAAALVQAGHRAIVVSAGGPLVAFLLSIGAEHITLDIGRKSLLTLRHIAAL RRLFAQLRPDIVHARSRLPAWLTWYALHGLFFSPKPRFVTTVHGLNAPNPYSAVMTYGERVICVSNVVHDYVLRHYRRTD PQRLRTIPRGVDLARFRRRPYPDRSARRWARKYVPCLDDNTRLLLMPGRGTRLKGHGDALLLLAFLRRVFHYNICLWLPG ACQPGRESYLAELEAQARELGVTDCVVFTPPTEHIVEAYAASDLVLQLSRKPEAFGRTVLEALAVGRTVLGWNHGGVGEL LTQLQPDGAVSPFDTAVLQRRAAMLLMHSPELPPDIPYTLQTMQSATLQVYDELCT
Sequences:
>Translated_376_residues MFVLPTRRLTVVQLLPALCSGGVERSTLEVAAALVQAGHRAIVVSAGGPLVAFLLSIGAEHITLDIGRKSLLTLRHIAAL RRLFAQLRPDIVHARSRLPAWLTWYALHGLFFSPKPRFVTTVHGLNAPNPYSAVMTYGERVICVSNVVHDYVLRHYRRTD PQRLRTIPRGVDLARFRRRPYPDRSARRWARKYVPCLDDNTRLLLMPGRGTRLKGHGDALLLLAFLRRVFHYNICLWLPG ACQPGRESYLAELEAQARELGVTDCVVFTPPTEHIVEAYAASDLVLQLSRKPEAFGRTVLEALAVGRTVLGWNHGGVGEL LTQLQPDGAVSPFDTAVLQRRAAMLLMHSPELPPDIPYTLQTMQSATLQVYDELCT >Mature_376_residues MFVLPTRRLTVVQLLPALCSGGVERSTLEVAAALVQAGHRAIVVSAGGPLVAFLLSIGAEHITLDIGRKSLLTLRHIAAL RRLFAQLRPDIVHARSRLPAWLTWYALHGLFFSPKPRFVTTVHGLNAPNPYSAVMTYGERVICVSNVVHDYVLRHYRRTD PQRLRTIPRGVDLARFRRRPYPDRSARRWARKYVPCLDDNTRLLLMPGRGTRLKGHGDALLLLAFLRRVFHYNICLWLPG ACQPGRESYLAELEAQARELGVTDCVVFTPPTEHIVEAYAASDLVLQLSRKPEAFGRTVLEALAVGRTVLGWNHGGVGEL LTQLQPDGAVSPFDTAVLQRRAAMLLMHSPELPPDIPYTLQTMQSATLQVYDELCT
Specific function: Involved In The Addition Of The First Glucose Residue To The Lipopolysaccharide Core. [C]
COG id: COG0438
COG function: function code M; Glycosyltransferase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 41966; Mature: 41966
Theoretical pI: Translated: 10.02; Mature: 10.02
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.9 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 1.9 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFVLPTRRLTVVQLLPALCSGGVERSTLEVAAALVQAGHRAIVVSAGGPLVAFLLSIGAE CCCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCEEEEECCCHHHHHHHHHCCC HITLDIGRKSLLTLRHIAALRRLFAQLRPDIVHARSRLPAWLTWYALHGLFFSPKPRFVT EEEEECCHHHHHHHHHHHHHHHHHHHHCHHHHHHHHCCCHHHHHHHHHCCCCCCCCCEEE TVHGLNAPNPYSAVMTYGERVICVSNVVHDYVLRHYRRTDPQRLRTIPRGVDLARFRRRP EEECCCCCCHHHHHHHCCCEEEHHHHHHHHHHHHHHHCCCHHHHHHCCCCCCHHHHHCCC YPDRSARRWARKYVPCLDDNTRLLLMPGRGTRLKGHGDALLLLAFLRRVFHYNICLWLPG CCCHHHHHHHHHCCCCCCCCCEEEEECCCCCEECCCCCHHHHHHHHHHHHHCCEEEECCC ACQPGRESYLAELEAQARELGVTDCVVFTPPTEHIVEAYAASDLVLQLSRKPEAFGRTVL CCCCCHHHHHHHHHHHHHHCCCCEEEEECCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHH EALAVGRTVLGWNHGGVGELLTQLQPDGAVSPFDTAVLQRRAAMLLMHSPELPPDIPYTL HHHHHCCHHCCCCCCCHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCHHH QTMQSATLQVYDELCT HHHHHHHHHHHHHHCC >Mature Secondary Structure MFVLPTRRLTVVQLLPALCSGGVERSTLEVAAALVQAGHRAIVVSAGGPLVAFLLSIGAE CCCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCEEEEECCCHHHHHHHHHCCC HITLDIGRKSLLTLRHIAALRRLFAQLRPDIVHARSRLPAWLTWYALHGLFFSPKPRFVT EEEEECCHHHHHHHHHHHHHHHHHHHHCHHHHHHHHCCCHHHHHHHHHCCCCCCCCCEEE TVHGLNAPNPYSAVMTYGERVICVSNVVHDYVLRHYRRTDPQRLRTIPRGVDLARFRRRP EEECCCCCCHHHHHHHCCCEEEHHHHHHHHHHHHHHHCCCHHHHHHCCCCCCHHHHHCCC YPDRSARRWARKYVPCLDDNTRLLLMPGRGTRLKGHGDALLLLAFLRRVFHYNICLWLPG CCCHHHHHHHHHCCCCCCCCCEEEEECCCCCEECCCCCHHHHHHHHHHHHHCCEEEECCC ACQPGRESYLAELEAQARELGVTDCVVFTPPTEHIVEAYAASDLVLQLSRKPEAFGRTVL CCCCCHHHHHHHHHHHHHHCCCCEEEEECCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHH EALAVGRTVLGWNHGGVGELLTQLQPDGAVSPFDTAVLQRRAAMLLMHSPELPPDIPYTL HHHHHCCHHCCCCCCCHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCHHH QTMQSATLQVYDELCT HHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: Glycosyltransferases; Hexosyltransferases [C]
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA