Definition | Xylella fastidiosa M23 chromosome, complete genome. |
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Accession | NC_010577 |
Length | 2,535,690 |
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The map label for this gene is 182680638
Identifier: 182680638
GI number: 182680638
Start: 97194
End: 97478
Strand: Direct
Name: 182680638
Synonym: XfasM23_0067
Alternate gene names: NA
Gene position: 97194-97478 (Clockwise)
Preceding gene: 182680636
Following gene: 182680639
Centisome position: 3.83
GC content: 57.19
Gene sequence:
>285_bases ATGACCCCATCGCGTGCCTTTACCAACCGCATGACAGCGGTCCTCACTGATAAAATGCTTAGCCACACCCTTTCAATGAT CTCACCCATGAGCCAGACCGCCACCGCACCCGCCAACGCCCAGAAGCGTTACACCGTGCATCGCCGTGATCTGCCATTGA GCTGCCCAATGCCGGAGATGGCACTATGGAACTCACACCCGCGGGTCTATCTGCCGATAGAGGATGAACCGAATGGCGAG GTCACCTGCCCCTACTGTGGGGCCGTCTACACGTTAATTGACTGA
Upstream 100 bases:
>100_bases CCCTCATCGACACTGCAACATCTTTTGCCAACATCGTGCGTGGTTATGTAGATACGAGAATGATGAGGATTGTCATGATG CAGCAACCCAAGTGTGATTC
Downstream 100 bases:
>100_bases ATGTTTGTCTTGCCGACGCGTCGTCTCACCGTCGTACAGCTACTGCCAGCACTATGTTCCGGTGGCGTCGAACGCTCAAC CTTGGAAGTTGCCGCAGCGC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 94; Mature: 93
Protein sequence:
>94_residues MTPSRAFTNRMTAVLTDKMLSHTLSMISPMSQTATAPANAQKRYTVHRRDLPLSCPMPEMALWNSHPRVYLPIEDEPNGE VTCPYCGAVYTLID
Sequences:
>Translated_94_residues MTPSRAFTNRMTAVLTDKMLSHTLSMISPMSQTATAPANAQKRYTVHRRDLPLSCPMPEMALWNSHPRVYLPIEDEPNGE VTCPYCGAVYTLID >Mature_93_residues TPSRAFTNRMTAVLTDKMLSHTLSMISPMSQTATAPANAQKRYTVHRRDLPLSCPMPEMALWNSHPRVYLPIEDEPNGEV TCPYCGAVYTLID
Specific function: Unknown
COG id: COG4391
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 10541; Mature: 10410
Theoretical pI: Translated: 7.44; Mature: 7.44
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.2 %Cys (Translated Protein) 7.4 %Met (Translated Protein) 10.6 %Cys+Met (Translated Protein) 3.2 %Cys (Mature Protein) 6.5 %Met (Mature Protein) 9.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTPSRAFTNRMTAVLTDKMLSHTLSMISPMSQTATAPANAQKRYTVHRRDLPLSCPMPEM CCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHCCCCCCCCCCEEEECCCCCCCCCCCCC ALWNSHPRVYLPIEDEPNGEVTCPYCGAVYTLID HHCCCCCEEEEECCCCCCCCEECCCCCEEEEECC >Mature Secondary Structure TPSRAFTNRMTAVLTDKMLSHTLSMISPMSQTATAPANAQKRYTVHRRDLPLSCPMPEM CCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHCCCCCCCCCCEEEECCCCCCCCCCCCC ALWNSHPRVYLPIEDEPNGEVTCPYCGAVYTLID HHCCCCCEEEEECCCCCCCCEECCCCCEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA