Definition | Xylella fastidiosa M23 chromosome, complete genome. |
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Accession | NC_010577 |
Length | 2,535,690 |
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The map label for this gene is yfiQ [H]
Identifier: 182680602
GI number: 182680602
Start: 39107
End: 39646
Strand: Direct
Name: yfiQ [H]
Synonym: XfasM23_0030
Alternate gene names: 182680602
Gene position: 39107-39646 (Clockwise)
Preceding gene: 182680601
Following gene: 182680603
Centisome position: 1.54
GC content: 53.52
Gene sequence:
>540_bases ATGTCTGTCCGCAATCGTATGCCGCCTTGGCATGAGAACTTTAAGTTGCCGAATGGTCATGTTTTGCTGTTGCGTCCTGT CCGCTCTGAAGATGTCGAACCTTTGCAGGGGGTATTTGCGTTGATGGGGCCCCAAGAAATCCGTGAGAGGTTTGCACCGT CTGCGACCGGTTCAAGTGAACGCTTCCAACAACTGACCAATCCCAATGCTAAGCGTGAGATCGTGCTGGTCGCAGCCGAG CAGTTGCCACCGGGAGAGGCCATGATTGCCGCGCTGGCGCGTGCCTCAATCGTGCCCAATTCGCGTCATGCTGAGTACAT TATTTTGGTCAGCAGTTTCGTGAGTGGCCAGGGGTTGGGGCGACAGTTGCTGCGTAAATTGGTGAAGTGGGCGCGTGGCA AGTATCTCGATCATCTCTATGGCGACATATTGGAGCGCAACAGGCCAATGTTGGAATTGGCCGAGTCATTGGGTTTCCAA CGTGAGTCTCATCCGGAGTCCCCAGATTTGGTGCGTATGACATTGAAACTGTATGGTTGA
Upstream 100 bases:
>100_bases AGGATTGCAATGTGGATATGTTCCCGTTCACCGCTGACCAGTGTGGTGATGCCAGAATCTGGTCATTATTTCTGATCACT ATTTAAAAGAAGATAACGTG
Downstream 100 bases:
>100_bases TTGATCGGTGAGTGACTGTCCAACAGGGAACTCCTGAGGCAGGCTCTGCTAAAATCAACGGTTAATCATGTCACCATCCT CCTTTCCCTCTCCGCTGCTG
Product: GCN5-like N-acetyltransferase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 179; Mature: 178
Protein sequence:
>179_residues MSVRNRMPPWHENFKLPNGHVLLLRPVRSEDVEPLQGVFALMGPQEIRERFAPSATGSSERFQQLTNPNAKREIVLVAAE QLPPGEAMIAALARASIVPNSRHAEYIILVSSFVSGQGLGRQLLRKLVKWARGKYLDHLYGDILERNRPMLELAESLGFQ RESHPESPDLVRMTLKLYG
Sequences:
>Translated_179_residues MSVRNRMPPWHENFKLPNGHVLLLRPVRSEDVEPLQGVFALMGPQEIRERFAPSATGSSERFQQLTNPNAKREIVLVAAE QLPPGEAMIAALARASIVPNSRHAEYIILVSSFVSGQGLGRQLLRKLVKWARGKYLDHLYGDILERNRPMLELAESLGFQ RESHPESPDLVRMTLKLYG >Mature_178_residues SVRNRMPPWHENFKLPNGHVLLLRPVRSEDVEPLQGVFALMGPQEIRERFAPSATGSSERFQQLTNPNAKREIVLVAAEQ LPPGEAMIAALARASIVPNSRHAEYIILVSSFVSGQGLGRQLLRKLVKWARGKYLDHLYGDILERNRPMLELAESLGFQR ESHPESPDLVRMTLKLYG
Specific function: Unknown
COG id: COG0454
COG function: function code KR; Histone acetyltransferase HPA2 and related acetyltransferases
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 N-acetyltransferase domain [H]
Homologues:
Organism=Escherichia coli, GI1788938, Length=167, Percent_Identity=31.7365269461078, Blast_Score=74, Evalue=7e-15,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000182 - InterPro: IPR016181 - InterPro: IPR011761 - InterPro: IPR003781 - InterPro: IPR016040 - InterPro: IPR016102 [H]
Pfam domain/function: PF00583 Acetyltransf_1 [H]
EC number: NA
Molecular weight: Translated: 20217; Mature: 20086
Theoretical pI: Translated: 10.09; Mature: 10.09
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.4 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSVRNRMPPWHENFKLPNGHVLLLRPVRSEDVEPLQGVFALMGPQEIRERFAPSATGSSE CCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCHHHHHHHHCCHHHHHHHHCCCCCCCHH RFQQLTNPNAKREIVLVAAEQLPPGEAMIAALARASIVPNSRHAEYIILVSSFVSGQGLG HHHHHCCCCCCCEEEEEECCCCCCHHHHHHHHHHHHCCCCCCCCEEEEEEEHHHCCCCHH RQLLRKLVKWARGKYLDHLYGDILERNRPMLELAESLGFQRESHPESPDLVRMTLKLYG HHHHHHHHHHHCCHHHHHHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCHHHHHHHHHCC >Mature Secondary Structure SVRNRMPPWHENFKLPNGHVLLLRPVRSEDVEPLQGVFALMGPQEIRERFAPSATGSSE CCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCHHHHHHHHCCHHHHHHHHCCCCCCCHH RFQQLTNPNAKREIVLVAAEQLPPGEAMIAALARASIVPNSRHAEYIILVSSFVSGQGLG HHHHHCCCCCCCEEEEEECCCCCCHHHHHHHHHHHHCCCCCCCCEEEEEEEHHHCCCCHH RQLLRKLVKWARGKYLDHLYGDILERNRPMLELAESLGFQRESHPESPDLVRMTLKLYG HHHHHHHHHHHCCHHHHHHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9278503 [H]