Definition | Xylella fastidiosa M23 chromosome, complete genome. |
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Accession | NC_010577 |
Length | 2,535,690 |
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The map label for this gene is 182680594
Identifier: 182680594
GI number: 182680594
Start: 25761
End: 26348
Strand: Direct
Name: 182680594
Synonym: XfasM23_0022
Alternate gene names: NA
Gene position: 25761-26348 (Clockwise)
Preceding gene: 182680593
Following gene: 182680595
Centisome position: 1.02
GC content: 50.51
Gene sequence:
>588_bases ATGAGGATGACTCACCTCGGGCCGTACAGACAGCGTGGCATCTCTTTAATTGTCATACTACTGCTGCTGCTGGTAATGAC GTTGATTGGTTTAGCTGTTCTGCGCACGACGTTACTTCAAGAACGTATGAGCGCTAACCTCCGTGATCGCAGTTTGAGTT TTCAAGCTGCAGAAGCAGCGCTTCGCGATGCTGAGGAGTTCATCAATACAGAGAATGCTAAAGGAAAAGTGGCCGGGTTC AATTGTACGGCAGCGGGAAGCCAATGTCCGGCGATTCCGGAGAATACTTATACTGGAAATCTATCATCTGGGTGTAGCAG CGGCGCCGAAAATTGTTGGGTCAATGCTACTGGCAGCCAAGCAGTTACCCGCAAGATTGGACAGTATTACATCCAATACC TAGGAGAACGCGCCGGCGTCAACCAAGAGCCATTGGGTGCAGGTTCCAGCGCTAGCCAAAGTCAATATGGCGCTGCCGAG GAAATCTCTGCGGAAAAGTATTACCGCATCATTGCCCGAAGCAGCGATCCGTCTAGCAATGATGAGCGCGCGTTCGTTGT CCTGCAAACGGCTGTCATCATTAATTAA
Upstream 100 bases:
>100_bases GAGTTGCCTTGACGATCCAGACGACCGACAGAGTGGGTGTTGATAACAACGTCGTGTCACGCACCCTCACCTCCGTCACC AGCTTACGGAACAGAAATTT
Downstream 100 bases:
>100_bases TTGGATTTCTTCAAGATATCGAAATGAAAAAAACAGTGTTTAATCCGGCCTTGAATCGAGCGGCTGCGATATTGATCGGC ACGCTCGTAGGTATCAGCGG
Product: PilX protein
Products: NA
Alternate protein names: PilX Protein
Number of amino acids: Translated: 195; Mature: 195
Protein sequence:
>195_residues MRMTHLGPYRQRGISLIVILLLLLVMTLIGLAVLRTTLLQERMSANLRDRSLSFQAAEAALRDAEEFINTENAKGKVAGF NCTAAGSQCPAIPENTYTGNLSSGCSSGAENCWVNATGSQAVTRKIGQYYIQYLGERAGVNQEPLGAGSSASQSQYGAAE EISAEKYYRIIARSSDPSSNDERAFVVLQTAVIIN
Sequences:
>Translated_195_residues MRMTHLGPYRQRGISLIVILLLLLVMTLIGLAVLRTTLLQERMSANLRDRSLSFQAAEAALRDAEEFINTENAKGKVAGF NCTAAGSQCPAIPENTYTGNLSSGCSSGAENCWVNATGSQAVTRKIGQYYIQYLGERAGVNQEPLGAGSSASQSQYGAAE EISAEKYYRIIARSSDPSSNDERAFVVLQTAVIIN >Mature_195_residues MRMTHLGPYRQRGISLIVILLLLLVMTLIGLAVLRTTLLQERMSANLRDRSLSFQAAEAALRDAEEFINTENAKGKVAGF NCTAAGSQCPAIPENTYTGNLSSGCSSGAENCWVNATGSQAVTRKIGQYYIQYLGERAGVNQEPLGAGSSASQSQYGAAE EISAEKYYRIIARSSDPSSNDERAFVVLQTAVIIN
Specific function: Unknown
COG id: COG4726
COG function: function code NU; Tfp pilus assembly protein PilX
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 21003; Mature: 21003
Theoretical pI: Translated: 7.13; Mature: 7.13
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.1 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 2.1 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 4.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRMTHLGPYRQRGISLIVILLLLLVMTLIGLAVLRTTLLQERMSANLRDRSLSFQAAEAA CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHH LRDAEEFINTENAKGKVAGFNCTAAGSQCPAIPENTYTGNLSSGCSSGAENCWVNATGSQ HHHHHHHHCCCCCCCCEECCEECCCCCCCCCCCCCCCCCCCCHHHCCCCCCCEEECCCHH AVTRKIGQYYIQYLGERAGVNQEPLGAGSSASQSQYGAAEEISAEKYYRIIARSSDPSSN HHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHCCCHHHHHHHHHHHHHHCCCCCCCC DERAFVVLQTAVIIN CCEEEEEEEEEECCC >Mature Secondary Structure MRMTHLGPYRQRGISLIVILLLLLVMTLIGLAVLRTTLLQERMSANLRDRSLSFQAAEAA CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHH LRDAEEFINTENAKGKVAGFNCTAAGSQCPAIPENTYTGNLSSGCSSGAENCWVNATGSQ HHHHHHHHCCCCCCCCEECCEECCCCCCCCCCCCCCCCCCCCHHHCCCCCCCEEECCCHH AVTRKIGQYYIQYLGERAGVNQEPLGAGSSASQSQYGAAEEISAEKYYRIIARSSDPSSN HHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHCCCHHHHHHHHHHHHHHCCCCCCCC DERAFVVLQTAVIIN CCEEEEEEEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA