Definition | Xylella fastidiosa M23 chromosome, complete genome. |
---|---|
Accession | NC_010577 |
Length | 2,535,690 |
Click here to switch to the map view.
The map label for this gene is 182680586
Identifier: 182680586
GI number: 182680586
Start: 16143
End: 16685
Strand: Direct
Name: 182680586
Synonym: XfasM23_0014
Alternate gene names: NA
Gene position: 16143-16685 (Clockwise)
Preceding gene: 182680585
Following gene: 182680587
Centisome position: 0.64
GC content: 52.49
Gene sequence:
>543_bases ATGTCTATCCCTTCTTCCGCTCGTACCTTCGTGAAAGTCATCGCTTCCATTTCCCTTTGTTTAGGTGCATTGAGCGTGTT GACGAGTCTGCTGTCGATCGTTCGCCTCGAATTGTTTCCTGACCAAGAGCGTGGAACGTTGCAGGGCCTATTGGGTGTTC CTATTCCGCCCCGGTTTTCTTGGGTGTTGAGGGATACCCTGGAACTTTCCTTGGCCAATGGGGCGCTGTCATTACTGTTT ATCTGCGTCGGTTGCGGACTGCTGTATCAGCGTGAATGGGCGCGACGTGGAATCATGGCGCTGCTGCTGATCGTGACCCT TGTTAACTTCTCTGTTTTACCTTTGATGGGAGTTCTATTCGATACCGTGATGACCTTGCTAACACCGGAGATGATCGTCG CACTAGAAACCACCACACTGCTGCATCAAGCCCGGTGGACGTTCCTTGGCTTCGGTGTCGTTGTCGCAATCGCCGTAGCA GTATTGAATGGCTGGATGATTTGGCGCTTTCGGGCACCGGAGATACGCGCTCAGTTCCATTGA
Upstream 100 bases:
>100_bases ATACAAGCGCATCCTTAAATTGTTCGAAACACAGTTGAAACAATGAACCTAATCCGTCAGATGTTTTAATTCCGCTGCGG GTTATTGTTGGAGCGCTCTC
Downstream 100 bases:
>100_bases GTCTGTAGCCTAAGCCGATACCAGTACAGCCACGGCTTCGGTGCAATTGAGCTGTTCACTAAAACAGCGCCGCCGCTGTA CTGCGATGTCATCCATGTGT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 180; Mature: 179
Protein sequence:
>180_residues MSIPSSARTFVKVIASISLCLGALSVLTSLLSIVRLELFPDQERGTLQGLLGVPIPPRFSWVLRDTLELSLANGALSLLF ICVGCGLLYQREWARRGIMALLLIVTLVNFSVLPLMGVLFDTVMTLLTPEMIVALETTTLLHQARWTFLGFGVVVAIAVA VLNGWMIWRFRAPEIRAQFH
Sequences:
>Translated_180_residues MSIPSSARTFVKVIASISLCLGALSVLTSLLSIVRLELFPDQERGTLQGLLGVPIPPRFSWVLRDTLELSLANGALSLLF ICVGCGLLYQREWARRGIMALLLIVTLVNFSVLPLMGVLFDTVMTLLTPEMIVALETTTLLHQARWTFLGFGVVVAIAVA VLNGWMIWRFRAPEIRAQFH >Mature_179_residues SIPSSARTFVKVIASISLCLGALSVLTSLLSIVRLELFPDQERGTLQGLLGVPIPPRFSWVLRDTLELSLANGALSLLFI CVGCGLLYQREWARRGIMALLLIVTLVNFSVLPLMGVLFDTVMTLLTPEMIVALETTTLLHQARWTFLGFGVVVAIAVAV LNGWMIWRFRAPEIRAQFH
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 19894; Mature: 19763
Theoretical pI: Translated: 8.96; Mature: 8.96
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 3.3 %Met (Translated Protein) 5.0 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 4.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSIPSSARTFVKVIASISLCLGALSVLTSLLSIVRLELFPDQERGTLQGLLGVPIPPRFS CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHCCCCCCCCHH WVLRDTLELSLANGALSLLFICVGCGLLYQREWARRGIMALLLIVTLVNFSVLPLMGVLF HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH DTVMTLLTPEMIVALETTTLLHQARWTFLGFGVVVAIAVAVLNGWMIWRFRAPEIRAQFH HHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHEEEEECCCHHCCCC >Mature Secondary Structure SIPSSARTFVKVIASISLCLGALSVLTSLLSIVRLELFPDQERGTLQGLLGVPIPPRFS CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHCCCCCCCCHH WVLRDTLELSLANGALSLLFICVGCGLLYQREWARRGIMALLLIVTLVNFSVLPLMGVLF HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH DTVMTLLTPEMIVALETTTLLHQARWTFLGFGVVVAIAVAVLNGWMIWRFRAPEIRAQFH HHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHEEEEECCCHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA