Definition | Opitutus terrae PB90-1 chromosome, complete genome. |
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Accession | NC_010571 |
Length | 5,957,605 |
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Identifier: 182415622
GI number:
Start: 4953248
End: 4956421
Strand: Reverse
Name: Not Available
Synonym: Oter_3813
Alternate gene names: NA
Gene position: NA
Preceding gene: 182415623
Following gene: 182415621
Centisome position: NA
GC content: NA
Gene sequence:
>3174_bases ATGAACCTCTCCGATTTCTTCATCAAGCGTCCGATCTTCGCGGGCGTCGTTTCCACGATCATCTTCCTCGTCGGTGCGAT CTCACTGTGGCAACTGCCGGTCAGCGAGTATCCCGAAGTCGTGCCGCCGACCGTCGTCGTCCGCGCGGTGTATCCCGGTG CAAATCCCAAGACGATCTCCGAAACCGTCGCCGCGCCGCTCGAGCAATCGATCAACGGCGTGGAGAACTCGCTCTACATG TCGTCGCAGGCGACGAGCGACGGCGTGATGACGCTCACCGTTACGTTCAAGGTCGGCACCGATCTCGATAACGCGCAGGT GCAGGTGCAGAACCGCGTCGCCCAGGCCGAGCCGAAGCTGCCGGAGGTCGTGCGTCGGCTCGGGATCACGACGACCAAGA CCTCGCCCGACCTGCTCATGGTCGTGCACCTGTTCTCGCCGGACAACCGCTACGACGACATCTACGTCCGCAACTACGCC TCGCTGCAGGTGCGCGACGTGCTCGCGCGGCTGCCGGGGGTAGGGCAGGTGCGCATCTTTGGGTCGGGCGACTACGCCAT GCGCGTGTGGCTCGATCCGAACAAAGTCGCGGCGCGGGGGCTCACCGCTTCCGAGGTCGTCGCCGCGATTCGCGAACAGA ACGTGCAAGTCGCTTCGGGCGCGGTCGGCCAGCAGCCGAACCCCAACGCGATCAGCACGGAGCTGCTGATCAACACGCAG GGCCGGCTCACGACCGAGGACGAGTTTGGCGCCATCATCATCAAGACCGGCGCGCACGGCGAGCGCGTGCAGCTGCGCGA CGTCGCGCGCGTCGAGCTCGGCGCCGCCGACTACGCGCTCCGCTCGCTCCTGAACAACAAGCCGGCCGTCGCGCTGCCGA TTGCGCAACTGCCGGGGTCCAACGCCATCGCCACCTCCGACGCGGTGCGCGCGACCATGACCGAGCTGAAGAAAAATTTC CCGGAGGGGCTCGACTACAGCATCGTCTACGATCCGACGATCTTCGTGCGCGAATCGATCCGCGCGGTCGTGCACACGCT GCTCGAGGCGATCGTGCTGGTGGTGCTCGTGGTGATCCTGTTCCTGCAGACGTGGCGCGCGTCCATCATCCCGCTGGCGG CCGTGCCGGTCTCCCTCGTCGGCACGTTCGCGGTGATGCACGCGCTCGGATTTTCCATCAACGCGCTCTCGCTGTTCGGA CTCGTGCTCGCGATCGGCATCGTGGTCGACGACGCGATCGTGGTCGTCGAGAACGTCGAGCGGAACATCGCGCTCGGCAA AACCCCGTTCGAGGCCACCAAGCAGGCGATGCGCGAGGTGACCGGCCCAATCATCGCCACCGCGCTCGTGCTCTCGGCGG TCTTCATTCCCACGGCGTTCATCAGTGGGCTGACCGGACAGTTCTACAAGCAGTTCGCCATCACGATCGCGATCTCGACG ATCATCTCGGCGTTCAATTCGCTGACGCTTTCGCCCGCGCTGAGTGCACTGCTGCTCCGCGATCATCACGCGCCAAAGGA CTGGCTGACGCGCGGCATGGATCGTTCGCTCGGCTGGTTCTTCCGGCCGTTCAACCGGTTCTTCGAATGGTCCGCGCGGA AATATTCGCACGGCGTGGCGCGACTGCTGCGCGTCTCGGCCGTCGCGCTGCTGGTGTACGCGGGGTTGCTCGCGTTCACG GCGCTCTCTTTCCGCAAGATTCCGACCGGCTTCGTGCCGTCGCAGGACAAGCAGTATCTCGTGGCGTTCGCACAACTTCC GGCTGCAGCGTCACTCGAACGCACCGACGCGGTGATCCGTCGGATGAGCGAGATTGCCCTCAATCATCCCGGCGCGCAAA ACGCGATCGCGTTCCCCGGACTCTCGATCAACGGGTTCACCAACTCGCCGAACAGCGGGATCGTGTTCGTGGCGCTGAAG CCCTTCGAGGAGCGTCGCAGCGCGGAGCTTTCCGGCCAGGCGATCGCGCAGCAGCTGCAGCAGCAGTTTGGTGAGATCCA GGACGCCTACATCGCGATCTTCCCGCCGCCGCCCGTGCAGGGGCTCGGCACGATCGGCGGGTTCAAGCTCTACGTCGAGG ACCGCGGCGACCACGGCTTGGATGCGCTCTACGCGGCGACTCAGGGCTTGGTTGCGCAGGCGGCGCAGACGCCGGTGCTC ACGCGGGTGTTCTCCGGTTTCACCATCAACACGCCGCAGCTGCAGGCGGACGTCGACCGCGCGAAGGCGAAGAGCCAGGG CGTCCCGCTCCAGAATGTTTTCGAGACGATGCAGATCAACCTCGGCTCGCTCTACGTGAATGATTTCAACCGGTTCGGCC GCACCTACCAGGTGATCGCGCAGGCCGACGCGGAGTTTCGCCAGAAGCCGGACGACATCCTGCGGCTCAAGACCCGCAAC GCCGCCGGCCAGCTCGTCCCGCTCGGCGCCGTCGTCAACGTCAGCGAGACCTACGGGCCCGACCGCGTGGTGCGCTACAA CGGTTATCCGGCCGCCGAAATCAACGGCGCGCCGGCGCCTGGGTTCAGCTCGGGTCAGGCGGAGGCGGCGATGGAGCAGC TCGCGCGCGATCATCTGCCCACCCGCATGGCGCTGGATTGGACGGAGCTGACTTACCAGAAAATCATCGCGGGCAACACC GGCGTGCTCGTGTTTCCGCTGAGCCTCCTGCTCGTGTTCCTCGTCCTCGCGGCACAATACGAGAGCTTCCGGCTGCCGTT CGCGGTACTGCTAATCGTGCCGATGGCGCTGTTCTCCGCCATGGTCGGACTCTGGCTGACGCACGGCGAAAACAACGTGT TCACGCAGATTGGGCTGATGGTGCTGATCGGCTTGGCGGCGAAAAACGCCATCCTGATCGTCGAGTTCGCCCTCAAGCGC CGCGAGGAAGGCGAGAGCGTCGTGCAGGCGGCGCTCGATGCCGCGCGGCTGCGGCTGCGCCCGATTCTGATGACCTCGAT CGCTTTCATCGCCGGCGTCTTCCCGCTCGTGGTCAGCACCGGCGCCGGCGCGGAGATGCGGCGCGCGATGGGCGTCGCCG TGTTCGCCGGCATGATTGGCGTCACGTTGTTCGGCCTCTTTCTGACGCCGGTGTTCTACGTCGTCCTCGAAAAACTTGGC GTGCGCAAACCCGCCGCCGCCGCTGCACCGCTGCCCGCGCCGCAATCCGCCTGA
Upstream 100 bases:
>100_bases CTCGGCGCGTTGAGGACAACGCGCCCCACCACAACGCGCCGCCGGCGCCCCCTGGCCACTGCCTTGCCCAAATTCCCCGC TTAGCCCGTTCAGTCTGCTC
Downstream 100 bases:
>100_bases GCCGCCGTGCCCTCATCTCTCAGTCAGCAACCTCGTTCTTCAACCCATCCCTCCCATGTCTACTCACACGAAACCCAAAC TCTTCGGCAAAGTCGCCCTT
Product: hydrophobe/amphiphile efflux-1 (HAE1) family protein
Products: NA
Alternate protein names: NA
Number of amino acids: NA
Protein sequence:
>1057_residues MNLSDFFIKRPIFAGVVSTIIFLVGAISLWQLPVSEYPEVVPPTVVVRAVYPGANPKTISETVAAPLEQSINGVENSLYM SSQATSDGVMTLTVTFKVGTDLDNAQVQVQNRVAQAEPKLPEVVRRLGITTTKTSPDLLMVVHLFSPDNRYDDIYVRNYA SLQVRDVLARLPGVGQVRIFGSGDYAMRVWLDPNKVAARGLTASEVVAAIREQNVQVASGAVGQQPNPNAISTELLINTQ GRLTTEDEFGAIIIKTGAHGERVQLRDVARVELGAADYALRSLLNNKPAVALPIAQLPGSNAIATSDAVRATMTELKKNF PEGLDYSIVYDPTIFVRESIRAVVHTLLEAIVLVVLVVILFLQTWRASIIPLAAVPVSLVGTFAVMHALGFSINALSLFG LVLAIGIVVDDAIVVVENVERNIALGKTPFEATKQAMREVTGPIIATALVLSAVFIPTAFISGLTGQFYKQFAITIAIST IISAFNSLTLSPALSALLLRDHHAPKDWLTRGMDRSLGWFFRPFNRFFEWSARKYSHGVARLLRVSAVALLVYAGLLAFT ALSFRKIPTGFVPSQDKQYLVAFAQLPAAASLERTDAVIRRMSEIALNHPGAQNAIAFPGLSINGFTNSPNSGIVFVALK PFEERRSAELSGQAIAQQLQQQFGEIQDAYIAIFPPPPVQGLGTIGGFKLYVEDRGDHGLDALYAATQGLVAQAAQTPVL TRVFSGFTINTPQLQADVDRAKAKSQGVPLQNVFETMQINLGSLYVNDFNRFGRTYQVIAQADAEFRQKPDDILRLKTRN AAGQLVPLGAVVNVSETYGPDRVVRYNGYPAAEINGAPAPGFSSGQAEAAMEQLARDHLPTRMALDWTELTYQKIIAGNT GVLVFPLSLLLVFLVLAAQYESFRLPFAVLLIVPMALFSAMVGLWLTHGENNVFTQIGLMVLIGLAAKNAILIVEFALKR REEGESVVQAALDAARLRLRPILMTSIAFIAGVFPLVVSTGAGAEMRRAMGVAVFAGMIGVTLFGLFLTPVFYVVLEKLG VRKPAAAAAPLPAPQSA
Sequences:
NA
Specific function: NA
COG id: COG0841
COG function: function code V; Cation/multidrug efflux pump
Gene ontology:
Cell location: NA
Metaboloic importance: NA
Operon status: NA
Operon components: NA
Similarity: NA
Homologues:
NA
Paralogues:
NA
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: NA
Theoretical pI: NA
Prosite motif: NA
Important sites: NA
Signals:
NA
Transmembrane regions:
NA
Cys/Met content:
NA
Secondary structure: NA
PDB accession: NA
Resolution: NA
Structure class: NA
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: NA
TargetDB status: NA
Availability: NA
References: NA