| Definition | Clostridium botulinum B1 str. Okra, complete genome. |
|---|---|
| Accession | NC_010516 |
| Length | 3,958,233 |
Click here to switch to the map view.
The map label for this gene is 170757689
Identifier: 170757689
GI number: 170757689
Start: 980675
End: 981145
Strand: Reverse
Name: 170757689
Synonym: CLD_3695
Alternate gene names: NA
Gene position: 981145-980675 (Counterclockwise)
Preceding gene: 170754778
Following gene: 170755124
Centisome position: 24.79
GC content: 32.06
Gene sequence:
>471_bases ATGTGGAAAAATATAATACAAGTGCTAATGGCAGGAGTTGGCACCCTAGGATTTACACTATTTTTTTCTGTAGCAAAAAA ACATGTGCCCGCAGCAACTTTTGGAGGACTTCTTTCTTGGACAATTTATCTTGTTATCTACCACATTACAGGAAGCATAT TTTTAGGTAATATGATTGCATCAATGATAGTATGCCTTTGGTCTGAATTAATGGCAAGAAAATTAAAAGCACCAACAAAT ATTTTTATGATACCAGGAATTATTCCACTTCTTCCTGGAGGAACCCTTTATTATACTATGGAGGCAATGCTTCAAAGGAA TAAGAAGGTATTTGTACAAAAAGGATTAGAAACAGTAATGATAACTGTAGGAATTGTCGCTGGTATTGTTGCAGTATCTG TTATTTTAGTCTATTTTTTTACACTATTAAAAAAGTATAAAGAGAACTTAAATTCAAAACTAACATGTTAA
Upstream 100 bases:
>100_bases TAATGCCTGGATTATATAGACTAATTGAAGCATTTATGATTGCTCTTTCAATTGCAATAGGATTTGTAGGTTCAATGATG TTATTAGGAGGTATACTTTA
Downstream 100 bases:
>100_bases ATGTTATCAATTTATGCTTAGTGGATCTACATCAATATCTTAAACACAAAAATGTGGAAATTTATCCAATTAGCCTGGCT AAATCTCCACATTTTGTGGT
Product: hypothetical protein
Products: NA
Alternate protein names: Threonine/Serine Exporter
Number of amino acids: Translated: 156; Mature: 156
Protein sequence:
>156_residues MWKNIIQVLMAGVGTLGFTLFFSVAKKHVPAATFGGLLSWTIYLVIYHITGSIFLGNMIASMIVCLWSELMARKLKAPTN IFMIPGIIPLLPGGTLYYTMEAMLQRNKKVFVQKGLETVMITVGIVAGIVAVSVILVYFFTLLKKYKENLNSKLTC
Sequences:
>Translated_156_residues MWKNIIQVLMAGVGTLGFTLFFSVAKKHVPAATFGGLLSWTIYLVIYHITGSIFLGNMIASMIVCLWSELMARKLKAPTN IFMIPGIIPLLPGGTLYYTMEAMLQRNKKVFVQKGLETVMITVGIVAGIVAVSVILVYFFTLLKKYKENLNSKLTC >Mature_156_residues MWKNIIQVLMAGVGTLGFTLFFSVAKKHVPAATFGGLLSWTIYLVIYHITGSIFLGNMIASMIVCLWSELMARKLKAPTN IFMIPGIIPLLPGGTLYYTMEAMLQRNKKVFVQKGLETVMITVGIVAGIVAVSVILVYFFTLLKKYKENLNSKLTC
Specific function: Unknown
COG id: COG3610
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 17299; Mature: 17299
Theoretical pI: Translated: 10.36; Mature: 10.36
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 5.8 %Met (Translated Protein) 7.1 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 5.8 %Met (Mature Protein) 7.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MWKNIIQVLMAGVGTLGFTLFFSVAKKHVPAATFGGLLSWTIYLVIYHITGSIFLGNMIA CHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH SMIVCLWSELMARKLKAPTNIFMIPGIIPLLPGGTLYYTMEAMLQRNKKVFVQKGLETVM HHHHHHHHHHHHHHHCCCCCEEECCCHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH ITVGIVAGIVAVSVILVYFFTLLKKYKENLNSKLTC HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC >Mature Secondary Structure MWKNIIQVLMAGVGTLGFTLFFSVAKKHVPAATFGGLLSWTIYLVIYHITGSIFLGNMIA CHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH SMIVCLWSELMARKLKAPTNIFMIPGIIPLLPGGTLYYTMEAMLQRNKKVFVQKGLETVM HHHHHHHHHHHHHHHCCCCCEEECCCHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH ITVGIVAGIVAVSVILVYFFTLLKKYKENLNSKLTC HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA