| Definition | Clostridium botulinum B1 str. Okra, complete genome. |
|---|---|
| Accession | NC_010516 |
| Length | 3,958,233 |
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The map label for this gene is 170757415
Identifier: 170757415
GI number: 170757415
Start: 1464004
End: 1465134
Strand: Reverse
Name: 170757415
Synonym: CLD_3237
Alternate gene names: NA
Gene position: 1465134-1464004 (Counterclockwise)
Preceding gene: 170756460
Following gene: 170756736
Centisome position: 37.01
GC content: 22.99
Gene sequence:
>1131_bases ATGAGTGAAAATTTATTTTTATCTATATTATTAGGCTTCTGCAACTTATTATTACTGGCCTTTCAAATTGTAACCCCTAA AACTACAAGAAAAGATATTTTTTTAGGAGTTAGAATCCCTGAAGAGGAATCAGAGAAAATGGAAATTAAAGATATTTATA GAAGTTTTGTCTTATGGAATATTATGATAAGTTTACCTGTAATCTTTCTTTTATCCTTTATAGTATATAAATTTAATAAT ATAGGTCTATTTGTATTATTTACATTTATTTATATTTTTATTAGCTTTTTAATATATCTTAAATTCAATAGCGATGTAAA AAAATTAAAATCTAATAAAAATTGGTTCAAAAATAAAAAACAAATAATCGCTGTAGATACTGAATTTTCTTCTGAAAATG CTAATAAAAGTTTAATTAGTCCTTGGTGGTTTTTAATTCCTATTTTAATAATTTTAATTACTATATTTATGAATATAAAA GCATATCCAAACTTACCTAACAAAGTAGCTACACATTGGGACTTTAACGGTAATGTGAACGGTTATCAAAATAAATCTAC TTTTTTAATATATCAGATGCCATTAATGGAACTTTTTATAACTAGTATATTCTTTTTATGCTATAAAATTATAGGATGGT CTAAAAAACAAATAAGTGCTGTTAACCCTGAAGAATCAAAGACAAGAAATAAATTATTTAGGCGTATTCTATCAATTTAT ATGACCTTTAGTGCCATAGCAATGACTATATTCTTGTCTATAATAAATTCTCAAATCATGAAAATTATAGACATAAATGA TAAATATATTATGTATTTTAGCTTAATATTTACTTTATCTATAATAATAGCAACTATACTATTAGAAGTAAAAGTAGGTC AAGGTGGAAGTAATTTAAAGTTAAACTATAAAAATGATAATAAAAATAATTTTATAAATAAAGATGATGATGACCATTGG ATATTAGGTAATACAATATACTATAACAAAGAAGATCCTTCCTTATTTATAGAAAAAAGATTTGGCATAGGTTGGACTAT AAATGCAGGTAGACCTTTAGGCCTAATTATATATATATCTTTAATATTGATAATAATTGTATCTATAATAGCATCTTTTT TTGCTAAATAA
Upstream 100 bases:
>100_bases ATATAACTGCAGATGCTCATTGCAGGGGTTTTTCTAAAGAAGAATTTGTTAAATTTTGTGAAGACATACTAAAAGAATAT GAGTAAGGATGTGAATATCT
Downstream 100 bases:
>100_bases GGAAAATACGACTTAACAGCTTTTAAAGATCGAGCATTAAAACAAGAAATATTTAGTTTTATATAAAAGACTTTAATTTT ATTCAAGACTAATGGGCGTA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 376; Mature: 375
Protein sequence:
>376_residues MSENLFLSILLGFCNLLLLAFQIVTPKTTRKDIFLGVRIPEEESEKMEIKDIYRSFVLWNIMISLPVIFLLSFIVYKFNN IGLFVLFTFIYIFISFLIYLKFNSDVKKLKSNKNWFKNKKQIIAVDTEFSSENANKSLISPWWFLIPILIILITIFMNIK AYPNLPNKVATHWDFNGNVNGYQNKSTFLIYQMPLMELFITSIFFLCYKIIGWSKKQISAVNPEESKTRNKLFRRILSIY MTFSAIAMTIFLSIINSQIMKIIDINDKYIMYFSLIFTLSIIIATILLEVKVGQGGSNLKLNYKNDNKNNFINKDDDDHW ILGNTIYYNKEDPSLFIEKRFGIGWTINAGRPLGLIIYISLILIIIVSIIASFFAK
Sequences:
>Translated_376_residues MSENLFLSILLGFCNLLLLAFQIVTPKTTRKDIFLGVRIPEEESEKMEIKDIYRSFVLWNIMISLPVIFLLSFIVYKFNN IGLFVLFTFIYIFISFLIYLKFNSDVKKLKSNKNWFKNKKQIIAVDTEFSSENANKSLISPWWFLIPILIILITIFMNIK AYPNLPNKVATHWDFNGNVNGYQNKSTFLIYQMPLMELFITSIFFLCYKIIGWSKKQISAVNPEESKTRNKLFRRILSIY MTFSAIAMTIFLSIINSQIMKIIDINDKYIMYFSLIFTLSIIIATILLEVKVGQGGSNLKLNYKNDNKNNFINKDDDDHW ILGNTIYYNKEDPSLFIEKRFGIGWTINAGRPLGLIIYISLILIIIVSIIASFFAK >Mature_375_residues SENLFLSILLGFCNLLLLAFQIVTPKTTRKDIFLGVRIPEEESEKMEIKDIYRSFVLWNIMISLPVIFLLSFIVYKFNNI GLFVLFTFIYIFISFLIYLKFNSDVKKLKSNKNWFKNKKQIIAVDTEFSSENANKSLISPWWFLIPILIILITIFMNIKA YPNLPNKVATHWDFNGNVNGYQNKSTFLIYQMPLMELFITSIFFLCYKIIGWSKKQISAVNPEESKTRNKLFRRILSIYM TFSAIAMTIFLSIINSQIMKIIDINDKYIMYFSLIFTLSIIIATILLEVKVGQGGSNLKLNYKNDNKNNFINKDDDDHWI LGNTIYYNKEDPSLFIEKRFGIGWTINAGRPLGLIIYISLILIIIVSIIASFFAK
Specific function: Unknown
COG id: COG4194
COG function: function code R; Predicted membrane protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 43828; Mature: 43696
Theoretical pI: Translated: 9.95; Mature: 9.95
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSENLFLSILLGFCNLLLLAFQIVTPKTTRKDIFLGVRIPEEESEKMEIKDIYRSFVLWN CCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHH IMISLPVIFLLSFIVYKFNNIGLFVLFTFIYIFISFLIYLKFNSDVKKLKSNKNWFKNKK HHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHCCCHHHCCCC QIIAVDTEFSSENANKSLISPWWFLIPILIILITIFMNIKAYPNLPNKVATHWDFNGNVN EEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCHHCCEECCCCCCC GYQNKSTFLIYQMPLMELFITSIFFLCYKIIGWSKKQISAVNPEESKTRNKLFRRILSIY CCCCCCEEEEEECHHHHHHHHHHHHHHHHHHCCCCHHCCCCCCCHHHHHHHHHHHHHHHH MTFSAIAMTIFLSIINSQIMKIIDINDKYIMYFSLIFTLSIIIATILLEVKVGQGGSNLK HHHHHHHHHHHHHHHHHHHHEEEECCCCHHHHHHHHHHHHHHHHHHHHHEEECCCCCEEE LNYKNDNKNNFINKDDDDHWILGNTIYYNKEDPSLFIEKRFGIGWTINAGRPLGLIIYIS EEECCCCCCCCCCCCCCCCEEECCEEEECCCCCCEEEEEECCCCEEECCCCCHHHHHHHH LILIIIVSIIASFFAK HHHHHHHHHHHHHHCC >Mature Secondary Structure SENLFLSILLGFCNLLLLAFQIVTPKTTRKDIFLGVRIPEEESEKMEIKDIYRSFVLWN CCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHH IMISLPVIFLLSFIVYKFNNIGLFVLFTFIYIFISFLIYLKFNSDVKKLKSNKNWFKNKK HHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHCCCHHHCCCC QIIAVDTEFSSENANKSLISPWWFLIPILIILITIFMNIKAYPNLPNKVATHWDFNGNVN EEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCHHCCEECCCCCCC GYQNKSTFLIYQMPLMELFITSIFFLCYKIIGWSKKQISAVNPEESKTRNKLFRRILSIY CCCCCCEEEEEECHHHHHHHHHHHHHHHHHHCCCCHHCCCCCCCHHHHHHHHHHHHHHHH MTFSAIAMTIFLSIINSQIMKIIDINDKYIMYFSLIFTLSIIIATILLEVKVGQGGSNLK HHHHHHHHHHHHHHHHHHHHEEEECCCCHHHHHHHHHHHHHHHHHHHHHEEECCCCCEEE LNYKNDNKNNFINKDDDDHWILGNTIYYNKEDPSLFIEKRFGIGWTINAGRPLGLIIYIS EEECCCCCCCCCCCCCCCCEEECCEEEECCCCCCEEEEEECCCCEEECCCCCHHHHHHHH LILIIIVSIIASFFAK HHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA