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The map label for this gene is yfcE [H]

Identifier: 170757313

GI number: 170757313

Start: 1106885

End: 1107430

Strand: Reverse

Name: yfcE [H]

Synonym: CLD_3569

Alternate gene names: 170757313

Gene position: 1107430-1106885 (Counterclockwise)

Preceding gene: 170757216

Following gene: 170754293

Centisome position: 27.98

GC content: 27.66

Gene sequence:

>546_bases
ATGAAGTTATTTTTTATATCTGATATTCATGGTTCAGCTTATTATCTGGAAAAAGCTTTACATATATTTGAAGAAGAAAA
AGCAGATTATCTAATTATTTTAGGTGATGAACTTTATCATGGTGCTAGAAATCCTCTCCCTAAAGGATATGATCCTAAAA
AGGTAACAGAAATTCTAAATTCCTATAAAGATAAAATTATAGCTGTAAGAGGGAATTGCGAAAGTGAAGTAGATCAAATG
GTTCTTAATTATCCTATTATGAGTGATTATTCTATAGTTTTATATAATGGTAAAAGATTATTTTTAACTCACGGGCATAT
TTTTAATAAAGACAATATGCCTAATATAAGTGATGGAGATGCATTAATATATGGTCATACTCATATACCTTTAGCAGAAA
GAATAAACAATATATTTGTAATTAATCCTGGTTCCATTACATTTCCGAAGGAAAATACACCTCATTGTTATGGAATACTT
AGTGACAACCTATTCAAAATAAAAACCTTAGAAGGGAATACCTTTAAAGAGATTTCTCTAATATAA

Upstream 100 bases:

>100_bases
TTTTTCTTATTATGTAAATTATGAAATAATTACTTTTAATAAAAATAAAAAAAATATATAATTATATTTATACTTTGTTA
TTAGGAAAGGAGATATTTAT

Downstream 100 bases:

>100_bases
GTTTATAAACAGATTTCTAAGCTTCAGAGGGATTTTTTACTCCCACTAAAGCTTATTAACAGAATTCTTAGGAGTTTTAC
TCCTTAGAAGTCGTTATCCT

Product: phosphodiesterase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 181; Mature: 181

Protein sequence:

>181_residues
MKLFFISDIHGSAYYLEKALHIFEEEKADYLIILGDELYHGARNPLPKGYDPKKVTEILNSYKDKIIAVRGNCESEVDQM
VLNYPIMSDYSIVLYNGKRLFLTHGHIFNKDNMPNISDGDALIYGHTHIPLAERINNIFVINPGSITFPKENTPHCYGIL
SDNLFKIKTLEGNTFKEISLI

Sequences:

>Translated_181_residues
MKLFFISDIHGSAYYLEKALHIFEEEKADYLIILGDELYHGARNPLPKGYDPKKVTEILNSYKDKIIAVRGNCESEVDQM
VLNYPIMSDYSIVLYNGKRLFLTHGHIFNKDNMPNISDGDALIYGHTHIPLAERINNIFVINPGSITFPKENTPHCYGIL
SDNLFKIKTLEGNTFKEISLI
>Mature_181_residues
MKLFFISDIHGSAYYLEKALHIFEEEKADYLIILGDELYHGARNPLPKGYDPKKVTEILNSYKDKIIAVRGNCESEVDQM
VLNYPIMSDYSIVLYNGKRLFLTHGHIFNKDNMPNISDGDALIYGHTHIPLAERINNIFVINPGSITFPKENTPHCYGIL
SDNLFKIKTLEGNTFKEISLI

Specific function: Shows phosphodiesterase activity [H]

COG id: COG0622

COG function: function code R; Predicted phosphoesterase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the metallophosphoesterase superfamily. YfcE family [H]

Homologues:

Organism=Escherichia coli, GI1788638, Length=170, Percent_Identity=51.1764705882353, Blast_Score=193, Evalue=5e-51,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004843
- InterPro:   IPR020935
- InterPro:   IPR000979 [H]

Pfam domain/function: PF00149 Metallophos [H]

EC number: NA

Molecular weight: Translated: 20682; Mature: 20682

Theoretical pI: Translated: 6.30; Mature: 6.30

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKLFFISDIHGSAYYLEKALHIFEEEKADYLIILGDELYHGARNPLPKGYDPKKVTEILN
CEEEEEEECCCCHHHHHHHHHHHHCCCCCEEEEECCHHHCCCCCCCCCCCCHHHHHHHHH
SYKDKIIAVRGNCESEVDQMVLNYPIMSDYSIVLYNGKRLFLTHGHIFNKDNMPNISDGD
HHCCEEEEEECCCHHHHHHHHHCCCCCCCCEEEEECCCEEEEEECEEECCCCCCCCCCCC
ALIYGHTHIPLAERINNIFVINPGSITFPKENTPHCYGILSDNLFKIKTLEGNTFKEISL
EEEEECCCCCHHHHCCEEEEECCCEEECCCCCCCEEEEEECCCEEEEEEECCCCEEEEEE
I
C
>Mature Secondary Structure
MKLFFISDIHGSAYYLEKALHIFEEEKADYLIILGDELYHGARNPLPKGYDPKKVTEILN
CEEEEEEECCCCHHHHHHHHHHHHCCCCCEEEEECCHHHCCCCCCCCCCCCHHHHHHHHH
SYKDKIIAVRGNCESEVDQMVLNYPIMSDYSIVLYNGKRLFLTHGHIFNKDNMPNISDGD
HHCCEEEEEECCCHHHHHHHHHCCCCCCCCEEEEECCCEEEEEECEEECCCCCCCCCCCC
ALIYGHTHIPLAERINNIFVINPGSITFPKENTPHCYGILSDNLFKIKTLEGNTFKEISL
EEEEECCCCCHHHHCCEEEEECCCEEECCCCCCCEEEEEECCCEEEEEEECCCCEEEEEE
I
C

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]