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The map label for this gene is oxdD

Identifier: 170757261

GI number: 170757261

Start: 972381

End: 973589

Strand: Reverse

Name: oxdD

Synonym: CLD_3707

Alternate gene names: 170757261

Gene position: 973589-972381 (Counterclockwise)

Preceding gene: 170754390

Following gene: 170755972

Centisome position: 24.6

GC content: 43.76

Gene sequence:

>1209_bases
GTGTATATTCAAAATCAATATCAAAACTTATGCAATCTACTTATGTCCGGATGTATACCACAGCCTATAAGAGACGGGGC
TGGTGCCACTGATACAGGCCCACGGGATATTCTTCGAGATCTCGAAAATCCTGACATGCTTGTTCCACCTTCCACGGATA
CCGGCGTGATTCCTAATCTAAAATTTTCTTTTTCTGATACTAATATGACAATAAGACCGGGTGGGTGGTCTAGAGAGATT
ACTGCCAGGGAATTACCGGTAGCGACCACAATGGCGGGTGTTAATATGCGATTGACGCCAGGTGGTGTACGTGAGGTTCA
CTGGCATCAGCAGTCAGAATGGTCCTATATGCTGAAAGGGCGTGCCCGTATAACAGCAGTGGACGATCGTGGACGAAACT
TTATTGCCGATATTGGCCCTGGTGATCTTTGGTTCTTCCCCCCACTTTTCCCACATTCCATTCAAGGTTTGGAAGAGGGC
TGCGAATTTTTGCTTCTTTTTGATGATGGAAACTTTTCTGACCTGCTAACATTCTCTCTCTCCGAATTTTTCGCCCATTA
TCCCAAGGATGTTCTGGCAGCTAATTTTGGTGTGACTAAGAACTGCTTCAACAGTCTTCCAGAAGGTCAAGTATATATTT
ATCAGGATACTATCCCGGGCCCTTTGGAAAGTGAATCAATCGAATCCCCATATGGGACTATTCCCCAAAGTTACAAACAT
AGCTTATTAGCACAAAAACCAATGACAACACCTGGTGGAAGCGTACGTATTGCAGATACTTCTAACTTTCCAGTTGCCAA
AACCACCGCTGCGGCTTTGGTGGAGATTAAACCCGGTGGAATGAGAGAAATTCATTGGCATCCTAACGACGAGTTTCAAT
ATTTCCTTACCGGGCAGTCACGCATGACAGTATTCGCGGATACCGGTGCTTCTCGTACATTTGATTATAGAGCTGGTGAT
GTGGGTTATGTACCCACTGGCTATGGGCATTATGTTCAAAATATCGGTAATGAAACGGTATGGTTTTTAGAAGCATTTAG
GAGCGATCGATTTAAGAGCATATCACTAAGCCAAATGATGGCTATTACACCTCAGCAGCTTATTGCAAGTAATTTGAATG
TGGGACCTGGATTTTTAAATGCGTTGAGTAGGAGTAAGTTCCAATGCTCAGTTGGTCCATGTTTCCATGAAACAGAATGT
TCAGACTAA

Upstream 100 bases:

>100_bases
TAATCACATTACATTTACTCTTTTCATAAAATATAAAGTAATTGCAACTAATTTATAGAAACACTACTATATGCATTAAT
AATGATTTGGAGGAATTTTT

Downstream 100 bases:

>100_bases
AGCTTGATAAAGTAAAACATAAATCCTATTTTATAAATAACTATTCAGATGATAACAGAGGCTAGGGATTGCTAGAAAGA
AAGAACTTCGTAAATTTTAG

Product: oxalate decarboxylase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 402; Mature: 402

Protein sequence:

>402_residues
MYIQNQYQNLCNLLMSGCIPQPIRDGAGATDTGPRDILRDLENPDMLVPPSTDTGVIPNLKFSFSDTNMTIRPGGWSREI
TARELPVATTMAGVNMRLTPGGVREVHWHQQSEWSYMLKGRARITAVDDRGRNFIADIGPGDLWFFPPLFPHSIQGLEEG
CEFLLLFDDGNFSDLLTFSLSEFFAHYPKDVLAANFGVTKNCFNSLPEGQVYIYQDTIPGPLESESIESPYGTIPQSYKH
SLLAQKPMTTPGGSVRIADTSNFPVAKTTAAALVEIKPGGMREIHWHPNDEFQYFLTGQSRMTVFADTGASRTFDYRAGD
VGYVPTGYGHYVQNIGNETVWFLEAFRSDRFKSISLSQMMAITPQQLIASNLNVGPGFLNALSRSKFQCSVGPCFHETEC
SD

Sequences:

>Translated_402_residues
MYIQNQYQNLCNLLMSGCIPQPIRDGAGATDTGPRDILRDLENPDMLVPPSTDTGVIPNLKFSFSDTNMTIRPGGWSREI
TARELPVATTMAGVNMRLTPGGVREVHWHQQSEWSYMLKGRARITAVDDRGRNFIADIGPGDLWFFPPLFPHSIQGLEEG
CEFLLLFDDGNFSDLLTFSLSEFFAHYPKDVLAANFGVTKNCFNSLPEGQVYIYQDTIPGPLESESIESPYGTIPQSYKH
SLLAQKPMTTPGGSVRIADTSNFPVAKTTAAALVEIKPGGMREIHWHPNDEFQYFLTGQSRMTVFADTGASRTFDYRAGD
VGYVPTGYGHYVQNIGNETVWFLEAFRSDRFKSISLSQMMAITPQQLIASNLNVGPGFLNALSRSKFQCSVGPCFHETEC
SD
>Mature_402_residues
MYIQNQYQNLCNLLMSGCIPQPIRDGAGATDTGPRDILRDLENPDMLVPPSTDTGVIPNLKFSFSDTNMTIRPGGWSREI
TARELPVATTMAGVNMRLTPGGVREVHWHQQSEWSYMLKGRARITAVDDRGRNFIADIGPGDLWFFPPLFPHSIQGLEEG
CEFLLLFDDGNFSDLLTFSLSEFFAHYPKDVLAANFGVTKNCFNSLPEGQVYIYQDTIPGPLESESIESPYGTIPQSYKH
SLLAQKPMTTPGGSVRIADTSNFPVAKTTAAALVEIKPGGMREIHWHPNDEFQYFLTGQSRMTVFADTGASRTFDYRAGD
VGYVPTGYGHYVQNIGNETVWFLEAFRSDRFKSISLSQMMAITPQQLIASNLNVGPGFLNALSRSKFQCSVGPCFHETEC
SD

Specific function: Converts oxalate to formate and CO(2) [H]

COG id: COG2140

COG function: function code GR; Thermophilic glucose-6-phosphate isomerase and related metalloenzymes

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: To B.subtilis oxdC [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR017774
- InterPro:   IPR006045
- InterPro:   IPR011051
- InterPro:   IPR014710 [H]

Pfam domain/function: PF00190 Cupin_1 [H]

EC number: =4.1.1.2 [H]

Molecular weight: Translated: 44632; Mature: 44632

Theoretical pI: Translated: 4.97; Mature: 4.97

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
4.7 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
4.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MYIQNQYQNLCNLLMSGCIPQPIRDGAGATDTGPRDILRDLENPDMLVPPSTDTGVIPNL
CCCCHHHHHHHHHHHHCCCCCHHHCCCCCCCCCHHHHHHHCCCCCEEECCCCCCCCCCCE
KFSFSDTNMTIRPGGWSREITARELPVATTMAGVNMRLTPGGVREVHWHQQSEWSYMLKG
EEEECCCEEEECCCCCCCCCCHHHCCEEEEECCCEEEECCCCCEEEECCCCCCCEEEEEC
RARITAVDDRGRNFIADIGPGDLWFFPPLFPHSIQGLEEGCEFLLLFDDGNFSDLLTFSL
CEEEEEECCCCCEEEEECCCCCEEECCCCCCHHHHHHHCCCEEEEEECCCCCHHHHHHHH
SEFFAHYPKDVLAANFGVTKNCFNSLPEGQVYIYQDTIPGPLESESIESPYGTIPQSYKH
HHHHHHCCHHHHHHCCCCCHHHHHCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCHHHHH
SLLAQKPMTTPGGSVRIADTSNFPVAKTTAAALVEIKPGGMREIHWHPNDEFQYFLTGQS
HHHHCCCCCCCCCEEEEEECCCCCCCCCCEEEEEEECCCCCEEEEECCCCCEEEEEECCC
RMTVFADTGASRTFDYRAGDVGYVPTGYGHYVQNIGNETVWFLEAFRSDRFKSISLSQMM
EEEEEEECCCCCEEECCCCCCCCCCCCHHHHHHHCCCCHHHHHHHHHCCCCCEECHHHHH
AITPQQLIASNLNVGPGFLNALSRSKFQCSVGPCFHETECSD
HCCHHHHHHHCCCCCHHHHHHHHCCCEEECCCCCCCCCCCCC
>Mature Secondary Structure
MYIQNQYQNLCNLLMSGCIPQPIRDGAGATDTGPRDILRDLENPDMLVPPSTDTGVIPNL
CCCCHHHHHHHHHHHHCCCCCHHHCCCCCCCCCHHHHHHHCCCCCEEECCCCCCCCCCCE
KFSFSDTNMTIRPGGWSREITARELPVATTMAGVNMRLTPGGVREVHWHQQSEWSYMLKG
EEEECCCEEEECCCCCCCCCCHHHCCEEEEECCCEEEECCCCCEEEECCCCCCCEEEEEC
RARITAVDDRGRNFIADIGPGDLWFFPPLFPHSIQGLEEGCEFLLLFDDGNFSDLLTFSL
CEEEEEECCCCCEEEEECCCCCEEECCCCCCHHHHHHHCCCEEEEEECCCCCHHHHHHHH
SEFFAHYPKDVLAANFGVTKNCFNSLPEGQVYIYQDTIPGPLESESIESPYGTIPQSYKH
HHHHHHCCHHHHHHCCCCCHHHHHCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCHHHHH
SLLAQKPMTTPGGSVRIADTSNFPVAKTTAAALVEIKPGGMREIHWHPNDEFQYFLTGQS
HHHHCCCCCCCCCEEEEEECCCCCCCCCCEEEEEEECCCCCEEEEECCCCCEEEEEECCC
RMTVFADTGASRTFDYRAGDVGYVPTGYGHYVQNIGNETVWFLEAFRSDRFKSISLSQMM
EEEEEEECCCCCEEECCCCCCCCCCCCHHHHHHHCCCCHHHHHHHHHCCCCCEECHHHHH
AITPQQLIASNLNVGPGFLNALSRSKFQCSVGPCFHETECSD
HCCHHHHHHHCCCCCHHHHHHHHCCCEEECCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9384377; 11546787 [H]