| Definition | Clostridium botulinum B1 str. Okra, complete genome. |
|---|---|
| Accession | NC_010516 |
| Length | 3,958,233 |
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The map label for this gene is 170757246
Identifier: 170757246
GI number: 170757246
Start: 815569
End: 816978
Strand: Reverse
Name: 170757246
Synonym: CLD_0071
Alternate gene names: NA
Gene position: 816978-815569 (Counterclockwise)
Preceding gene: 170755345
Following gene: 170755518
Centisome position: 20.64
GC content: 29.36
Gene sequence:
>1410_bases ATGAGAAAAAAAGATATACTTGAGTTAAAAAAACGTTTTAAAAAAGACCACTGCACCTTCACTAAAATATGTGGTTGCTA TGTCAATGGTGAAAAAAATATTATTTTAAATTTTAGGGAATCCTTTTTAAATTTAGAGGAGGATGAGTATTTTAAGTACT TAGAAATTGCTAAAAAAGTCCTATCTGGAACTATTGGTAATAATATTTTAGAACTTAACTTTCCACTTAATGAAAATCTT GAAAATGAAAAACAACTTTCTTTGGTTAAGCTTAAAAAAAGCCAATTGAAAGACGATGCCCTGCTTCAAGATTTTTATAA ATCTATAATAGATAGTTATGATTATACTGGTAATTTTTTAATACTAGTTTTTCATGATGCTTATGATGTTATTACTAAAA CTACTGACAATTCTAAAATAGATGAATCTGAAGAAATATATGAGTATATTCTATGTGCAATATGTCCTGTTTCACTTTCA GATCCTGGACTTAGATACTTTGAAGAAGAAAAGAAAATAAAAGCACGTATTAGAGATTGGGTGGTGAATACTCCAACCCT TGGTTTTGTGTTCCCTGCTTTTATTGATCGTACTTCAGATGTTAATTCTGTTATGTACTACACTAAAAATGCAAAGGATC CACATCCTGAATTAATGGAAGAGGCTTTAGGTTGCTTCTCAAAACAAACTGCCACTATCCAAAAAGAAACCTTTCAAACA ATTATTAAAGATTCCATTAGTAGTGATGAAAAAAAAGCTGAGAAAACTTTTATTGAAATACAAGAAAACCTAAATACTAT GATAGATGAGTACAATTCAATATATGATGATAAAGATGATGAACCTATAACCCTAAAACAAAAGGACATACAAAATCTTT TAATAGAAAGTGGGGTTCCTGAAGAAGCTACTTATAAAATTGAAAAATCTTATGTAGAAAACTTTGGTGAAGACCTACCT TTAGCAGAACATTTAATTGACTCAAAAGTACTTAAGGCAAATGCTCAAAAGAAAAAGGAAGAACAGCTTGAAAAGCAAGT GGAAATTCTACAACATAGACTTGAAGAAGTGAAAAAAGAAGCAGCTGCGGATAATGAAGCTGAGATTTCTAAAAAGGATG ATGAAGATAATGTGACTTCAGATGAGGCTTTAGAAAATGATTTAGATAATGCCTTAGATGATGTTTTAAAAGATAATTTA GATGATGCCTTAGAAAATAATTTAGAAGAAGCTCCGGCTATCAATTCAGATGATAATAACATTACTTCTGACTATGATGT TATACTTCAAGTAAAGCCTGAAAAAATACCTAAAATCAAAGCTCAAATAATTGATGGTCAAAAATATATAGTTATTCCTA TCGATGAGAATGAACAAACTACAGTTAATGGCTTAAATGATTTGATTTAA
Upstream 100 bases:
>100_bases TAACTAATAAAATCTTTAATTAATACGCAAAAAATACTATACTTAATAATATATTAATTAATATCTACAAATAGAAAGGA CTAGATTGAGGAGTTTATAT
Downstream 100 bases:
>100_bases GTTATATAAATTAATAAAACAGTGCCATAATTACATAATCTGGCACTGTTTTTATTTTATTTTTTGCTATCTATTTTTGT TGAATAACTTTTTGATCTTC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 469; Mature: 469
Protein sequence:
>469_residues MRKKDILELKKRFKKDHCTFTKICGCYVNGEKNIILNFRESFLNLEEDEYFKYLEIAKKVLSGTIGNNILELNFPLNENL ENEKQLSLVKLKKSQLKDDALLQDFYKSIIDSYDYTGNFLILVFHDAYDVITKTTDNSKIDESEEIYEYILCAICPVSLS DPGLRYFEEEKKIKARIRDWVVNTPTLGFVFPAFIDRTSDVNSVMYYTKNAKDPHPELMEEALGCFSKQTATIQKETFQT IIKDSISSDEKKAEKTFIEIQENLNTMIDEYNSIYDDKDDEPITLKQKDIQNLLIESGVPEEATYKIEKSYVENFGEDLP LAEHLIDSKVLKANAQKKKEEQLEKQVEILQHRLEEVKKEAAADNEAEISKKDDEDNVTSDEALENDLDNALDDVLKDNL DDALENNLEEAPAINSDDNNITSDYDVILQVKPEKIPKIKAQIIDGQKYIVIPIDENEQTTVNGLNDLI
Sequences:
>Translated_469_residues MRKKDILELKKRFKKDHCTFTKICGCYVNGEKNIILNFRESFLNLEEDEYFKYLEIAKKVLSGTIGNNILELNFPLNENL ENEKQLSLVKLKKSQLKDDALLQDFYKSIIDSYDYTGNFLILVFHDAYDVITKTTDNSKIDESEEIYEYILCAICPVSLS DPGLRYFEEEKKIKARIRDWVVNTPTLGFVFPAFIDRTSDVNSVMYYTKNAKDPHPELMEEALGCFSKQTATIQKETFQT IIKDSISSDEKKAEKTFIEIQENLNTMIDEYNSIYDDKDDEPITLKQKDIQNLLIESGVPEEATYKIEKSYVENFGEDLP LAEHLIDSKVLKANAQKKKEEQLEKQVEILQHRLEEVKKEAAADNEAEISKKDDEDNVTSDEALENDLDNALDDVLKDNL DDALENNLEEAPAINSDDNNITSDYDVILQVKPEKIPKIKAQIIDGQKYIVIPIDENEQTTVNGLNDLI >Mature_469_residues MRKKDILELKKRFKKDHCTFTKICGCYVNGEKNIILNFRESFLNLEEDEYFKYLEIAKKVLSGTIGNNILELNFPLNENL ENEKQLSLVKLKKSQLKDDALLQDFYKSIIDSYDYTGNFLILVFHDAYDVITKTTDNSKIDESEEIYEYILCAICPVSLS DPGLRYFEEEKKIKARIRDWVVNTPTLGFVFPAFIDRTSDVNSVMYYTKNAKDPHPELMEEALGCFSKQTATIQKETFQT IIKDSISSDEKKAEKTFIEIQENLNTMIDEYNSIYDDKDDEPITLKQKDIQNLLIESGVPEEATYKIEKSYVENFGEDLP LAEHLIDSKVLKANAQKKKEEQLEKQVEILQHRLEEVKKEAAADNEAEISKKDDEDNVTSDEALENDLDNALDDVLKDNL DDALENNLEEAPAINSDDNNITSDYDVILQVKPEKIPKIKAQIIDGQKYIVIPIDENEQTTVNGLNDLI
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 53985; Mature: 53985
Theoretical pI: Translated: 4.28; Mature: 4.28
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 0.9 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRKKDILELKKRFKKDHCTFTKICGCYVNGEKNIILNFRESFLNLEEDEYFKYLEIAKKV CCCHHHHHHHHHHHHCCCCHHHHHEEEECCCCCEEEEEHHHHCCCCHHHHHHHHHHHHHH LSGTIGNNILELNFPLNENLENEKQLSLVKLKKSQLKDDALLQDFYKSIIDSYDYTGNFL HHHHHCCCEEEEECCCCCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCCCEE ILVFHDAYDVITKTTDNSKIDESEEIYEYILCAICPVSLSDPGLRYFEEEKKIKARIRDW EEEEECHHHHHHCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHH VVNTPTLGFVFPAFIDRTSDVNSVMYYTKNAKDPHPELMEEALGCFSKQTATIQKETFQT HCCCCCHHHHHHHHHCCCCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH IIKDSISSDEKKAEKTFIEIQENLNTMIDEYNSIYDDKDDEPITLKQKDIQNLLIESGVP HHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEECHHHHHHHHHHCCCC EEATYKIEKSYVENFGEDLPLAEHLIDSKVLKANAQKKKEEQLEKQVEILQHRLEEVKKE CHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH AAADNEAEISKKDDEDNVTSDEALENDLDNALDDVLKDNLDDALENNLEEAPAINSDDNN HCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCHHHHHHCCHHHCCCCCCCCCC ITSDYDVILQVKPEKIPKIKAQIIDGQKYIVIPIDENEQTTVNGLNDLI CCCCEEEEEEECCCCCCCHHHEEECCCEEEEEEECCCCCHHHCCHHHCC >Mature Secondary Structure MRKKDILELKKRFKKDHCTFTKICGCYVNGEKNIILNFRESFLNLEEDEYFKYLEIAKKV CCCHHHHHHHHHHHHCCCCHHHHHEEEECCCCCEEEEEHHHHCCCCHHHHHHHHHHHHHH LSGTIGNNILELNFPLNENLENEKQLSLVKLKKSQLKDDALLQDFYKSIIDSYDYTGNFL HHHHHCCCEEEEECCCCCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCCCEE ILVFHDAYDVITKTTDNSKIDESEEIYEYILCAICPVSLSDPGLRYFEEEKKIKARIRDW EEEEECHHHHHHCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHH VVNTPTLGFVFPAFIDRTSDVNSVMYYTKNAKDPHPELMEEALGCFSKQTATIQKETFQT HCCCCCHHHHHHHHHCCCCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH IIKDSISSDEKKAEKTFIEIQENLNTMIDEYNSIYDDKDDEPITLKQKDIQNLLIESGVP HHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEECHHHHHHHHHHCCCC EEATYKIEKSYVENFGEDLPLAEHLIDSKVLKANAQKKKEEQLEKQVEILQHRLEEVKKE CHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH AAADNEAEISKKDDEDNVTSDEALENDLDNALDDVLKDNLDDALENNLEEAPAINSDDNN HCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCHHHHHHCCHHHCCCCCCCCCC ITSDYDVILQVKPEKIPKIKAQIIDGQKYIVIPIDENEQTTVNGLNDLI CCCCEEEEEEECCCCCCCHHHEEECCCEEEEEEECCCCCHHHCCHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA