| Definition | Clostridium botulinum B1 str. Okra, complete genome. |
|---|---|
| Accession | NC_010516 |
| Length | 3,958,233 |
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The map label for this gene is fabH [H]
Identifier: 170757179
GI number: 170757179
Start: 848508
End: 849506
Strand: Reverse
Name: fabH [H]
Synonym: CLD_0035
Alternate gene names: 170757179
Gene position: 849506-848508 (Counterclockwise)
Preceding gene: 170755450
Following gene: 170754492
Centisome position: 21.46
GC content: 30.03
Gene sequence:
>999_bases ATGAGTATAAAAATTAAAAACATCGAGTATTACCATCCTAAAACAAGCTATTCTAATGAATATTTTTTGAAACATTTTTC AGAGCAAGACATAGATATTTCCGGATTATTAAATGTTACTGGAAGAAATAAGAGATATGTTTCTGAAGATTTTAATGAAA ATTCTTTAACTATGGCTATAGAAGCTTGCAAAAAAGTAATAAGGACTGCAAATATAGATGTACAAGATATAAATTTAGTT GTATTTGTATCTTCTACTCCAGAATATCTATCTCCTACAAATGCTGTTAAAATTCATGATGCTTTGGGTTTATCTAAGAA TACAAATGCATATGATATGAATGGTAATTGTGCGGGGATGATCATTGCAATGGATCAAGTCTGTAGAACAATGAAAAGCA ATAATAGAATTAAATATAGCTTACTTGTAGGTTCAGACTTAGTAATTAGATATTCAAGAAAATCAGAACCTATTACTTAT GCTAATTTTGGAGAATCTGCATGTGCTGTTTTACTAGAGAACACTGATGATAATATATCAGATTTCATAGATAGTTCATC TTACGTAGATAGCTCATTAAGCTGCTATATAAAATTTCCTCCTGATGGCTTTTCTAAGGTATTACCAATAGATGAAGATA CGCCAAAAGATAATAGAATAATAGAATGGGCAGATTTTAATACAGATGAGGCATTCGCAAGTTCTGTTGATTCAATAAAT GAAATACTAGATCGAAATAATCTAACTAAAGATGATATTAAATTATATTGCTTATCTCAATTTGCAAAGAAAAATATTGA TATGATAAGAGAGACTTTAGAAGAACCAGAGTACAAATTTCCATTCGTAGGTGACAGATTTGGATATACAGGTGTTACAA GTCCATTTCTTGCCTTAGCCGATTCTGTTTCAAATGGTAACCTTAATTCTGGAGATTATGTTATTTTATGGACAGTTGGA GCTGGTGTGGTTGCTTCATGTATACTACTTAGATATTAA
Upstream 100 bases:
>100_bases CACATTCAACATTTTTCTGCATAATTTTCTTAATTTATTGAAATATTTTTCGATAGTTATAAATAGACATATTTAACGAT AAAGATAAGGCGGAGATAAA
Downstream 100 bases:
>100_bases TATCAAATCACAAAGTCAGATATTAATTTTTTTGTTCTGAACGGAGTATGTAGGTAGATTTATGTAAATACAAATTTACC TACATACCTCCTAATATAGG
Product: 3-oxoacyl-[acyl-carrier-protein] synthase III-like protein
Products: NA
Alternate protein names: 3-oxoacyl-[acyl-carrier-protein] synthase III; Beta-ketoacyl-ACP synthase III; KAS III [H]
Number of amino acids: Translated: 332; Mature: 331
Protein sequence:
>332_residues MSIKIKNIEYYHPKTSYSNEYFLKHFSEQDIDISGLLNVTGRNKRYVSEDFNENSLTMAIEACKKVIRTANIDVQDINLV VFVSSTPEYLSPTNAVKIHDALGLSKNTNAYDMNGNCAGMIIAMDQVCRTMKSNNRIKYSLLVGSDLVIRYSRKSEPITY ANFGESACAVLLENTDDNISDFIDSSSYVDSSLSCYIKFPPDGFSKVLPIDEDTPKDNRIIEWADFNTDEAFASSVDSIN EILDRNNLTKDDIKLYCLSQFAKKNIDMIRETLEEPEYKFPFVGDRFGYTGVTSPFLALADSVSNGNLNSGDYVILWTVG AGVVASCILLRY
Sequences:
>Translated_332_residues MSIKIKNIEYYHPKTSYSNEYFLKHFSEQDIDISGLLNVTGRNKRYVSEDFNENSLTMAIEACKKVIRTANIDVQDINLV VFVSSTPEYLSPTNAVKIHDALGLSKNTNAYDMNGNCAGMIIAMDQVCRTMKSNNRIKYSLLVGSDLVIRYSRKSEPITY ANFGESACAVLLENTDDNISDFIDSSSYVDSSLSCYIKFPPDGFSKVLPIDEDTPKDNRIIEWADFNTDEAFASSVDSIN EILDRNNLTKDDIKLYCLSQFAKKNIDMIRETLEEPEYKFPFVGDRFGYTGVTSPFLALADSVSNGNLNSGDYVILWTVG AGVVASCILLRY >Mature_331_residues SIKIKNIEYYHPKTSYSNEYFLKHFSEQDIDISGLLNVTGRNKRYVSEDFNENSLTMAIEACKKVIRTANIDVQDINLVV FVSSTPEYLSPTNAVKIHDALGLSKNTNAYDMNGNCAGMIIAMDQVCRTMKSNNRIKYSLLVGSDLVIRYSRKSEPITYA NFGESACAVLLENTDDNISDFIDSSSYVDSSLSCYIKFPPDGFSKVLPIDEDTPKDNRIIEWADFNTDEAFASSVDSINE ILDRNNLTKDDIKLYCLSQFAKKNIDMIRETLEEPEYKFPFVGDRFGYTGVTSPFLALADSVSNGNLNSGDYVILWTVGA GVVASCILLRY
Specific function: Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the
COG id: COG0332
COG function: function code I; 3-oxoacyl-[acyl-carrier-protein] synthase III
Gene ontology:
Cell location: Cytoplasm (Probable) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the fabH family [H]
Homologues:
Organism=Escherichia coli, GI1787333, Length=336, Percent_Identity=25.297619047619, Blast_Score=90, Evalue=2e-19,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR013751 - InterPro: IPR013747 - InterPro: IPR004655 - InterPro: IPR016039 - InterPro: IPR016038 [H]
Pfam domain/function: PF08545 ACP_syn_III; PF08541 ACP_syn_III_C [H]
EC number: =2.3.1.41 [H]
Molecular weight: Translated: 37247; Mature: 37116
Theoretical pI: Translated: 4.49; Mature: 4.49
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.1 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 4.2 %Cys+Met (Translated Protein) 2.1 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSIKIKNIEYYHPKTSYSNEYFLKHFSEQDIDISGLLNVTGRNKRYVSEDFNENSLTMAI CEEEEECEEEECCCCCCCCHHHHHHCCCCCCCEEEEEEECCCCCCCCCCCCCCCHHHHHH EACKKVIRTANIDVQDINLVVFVSSTPEYLSPTNAVKIHDALGLSKNTNAYDMNGNCAGM HHHHHHHHHCCCCEEEEEEEEEECCCCHHCCCCCEEEEEHHHCCCCCCCEEECCCCCEEE IIAMDQVCRTMKSNNRIKYSLLVGSDLVIRYSRKSEPITYANFGESACAVLLENTDDNIS EEEHHHHHHHHHCCCCEEEEEEECCCEEEEECCCCCCEEEECCCCCEEEEEEECCCCCHH DFIDSSSYVDSSLSCYIKFPPDGFSKVLPIDEDTPKDNRIIEWADFNTDEAFASSVDSIN HHHCCCCCCCCCEEEEEECCCCCCCEEECCCCCCCCCCCEEEEECCCCHHHHHHHHHHHH EILDRNNLTKDDIKLYCLSQFAKKNIDMIRETLEEPEYKFPFVGDRFGYTGVTSPFLALA HHHHCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHH DSVSNGNLNSGDYVILWTVGAGVVASCILLRY HCCCCCCCCCCCEEEEEECCHHHHHHHHHHCC >Mature Secondary Structure SIKIKNIEYYHPKTSYSNEYFLKHFSEQDIDISGLLNVTGRNKRYVSEDFNENSLTMAI EEEEECEEEECCCCCCCCHHHHHHCCCCCCCEEEEEEECCCCCCCCCCCCCCCHHHHHH EACKKVIRTANIDVQDINLVVFVSSTPEYLSPTNAVKIHDALGLSKNTNAYDMNGNCAGM HHHHHHHHHCCCCEEEEEEEEEECCCCHHCCCCCEEEEEHHHCCCCCCCEEECCCCCEEE IIAMDQVCRTMKSNNRIKYSLLVGSDLVIRYSRKSEPITYANFGESACAVLLENTDDNIS EEEHHHHHHHHHCCCCEEEEEEECCCEEEEECCCCCCEEEECCCCCEEEEEEECCCCCHH DFIDSSSYVDSSLSCYIKFPPDGFSKVLPIDEDTPKDNRIIEWADFNTDEAFASSVDSIN HHHCCCCCCCCCEEEEEECCCCCCCEEECCCCCCCCCCCEEEEECCCCHHHHHHHHHHHH EILDRNNLTKDDIKLYCLSQFAKKNIDMIRETLEEPEYKFPFVGDRFGYTGVTSPFLALA HHHHCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHH DSVSNGNLNSGDYVILWTVGAGVVASCILLRY HCCCCCCCCCCCEEEEEECCHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA