| Definition | Clostridium botulinum B1 str. Okra, complete genome. |
|---|---|
| Accession | NC_010516 |
| Length | 3,958,233 |
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The map label for this gene is thiJ [C]
Identifier: 170757168
GI number: 170757168
Start: 1137487
End: 1138071
Strand: Reverse
Name: thiJ [C]
Synonym: CLD_3540
Alternate gene names: 170757168
Gene position: 1138071-1137487 (Counterclockwise)
Preceding gene: 170754788
Following gene: 170755346
Centisome position: 28.75
GC content: 33.5
Gene sequence:
>585_bases ATGAAAAAAGTATTATTACTTCTTGCCAATGGTTTTGAAGCTGTAGAAGCAAGTGTTTTTACAGATGTTATAGGATGGAA CAAATTAGAAGGTGATGGTACCACTGAATTAATAACTGTTGGAATAAGAGAAAAATTAAAATGTACTTTTAACTTCACAG TAACTCCTGAAATGCATGTCAGTGAAGTTAATATTGATGAATTTGATGCACTTGCAGTACCAGGTGGATTTGAAGAAGCA GAATTTTATGAAGATGCTTATAGCGAAGATTTTTTAAACATAATCAGAGAATTTGACAAAGCAAGAAAAACAATAGCTTC TATTTGCGTTGGTGCGCTGCCTATTGGGAAAAGTGGAGTACTAGTTGATAGAAATGCCACAACTTACAATTTAGGAAATG GTAGAAGGCAAAAACAATTATCTGAATTTGGTGCAAATGTTCTTCGTGATGAACCTGTTGTTGTAGATAAAAATATAATC ACTTCCTACAATCCTTCAACTGCTTTCCATGTAGCTTTCAAACTTTTAGAGCTGCTCACCTCTAAAGAAAACTGTGTTAA TGTTAAGAGACTAATGGGGTTTTAG
Upstream 100 bases:
>100_bases ATTATTAATTTCATTTATTTCAATTTTACTGATAGCACATATAGCATTATACTTAAGAAAAACAAATCTAAAATATATAA TTAAAAGGAGATATCAAAGT
Downstream 100 bases:
>100_bases CAAAATAATAAAGTACCAAATTTACTATATTAGAACAAAAGCAATATTCTTAAGAGACGTAACAAGGACTTACTTTTTTA TGGTAGGTCCTATTTTATTA
Product: DJ-1/PfpI family protein
Products: NA
Alternate protein names: Intracellular Protease/Amidase; DJ-1/PfpI Family Protein; Protein ThiJ; Protease; ThiJ/PfpI Domain Protein; ThiJ/PfpI Domain-Containing Protein; Thij/Pfpi DomaiN-Containing Protein; Protease I; Protease DJ-1/PfpI Family; Metal Dependent Phosphohydrolase; Dj-1/Pfpi Family; ThiJ/PfpI Family Protein
Number of amino acids: Translated: 194; Mature: 194
Protein sequence:
>194_residues MKKVLLLLANGFEAVEASVFTDVIGWNKLEGDGTTELITVGIREKLKCTFNFTVTPEMHVSEVNIDEFDALAVPGGFEEA EFYEDAYSEDFLNIIREFDKARKTIASICVGALPIGKSGVLVDRNATTYNLGNGRRQKQLSEFGANVLRDEPVVVDKNII TSYNPSTAFHVAFKLLELLTSKENCVNVKRLMGF
Sequences:
>Translated_194_residues MKKVLLLLANGFEAVEASVFTDVIGWNKLEGDGTTELITVGIREKLKCTFNFTVTPEMHVSEVNIDEFDALAVPGGFEEA EFYEDAYSEDFLNIIREFDKARKTIASICVGALPIGKSGVLVDRNATTYNLGNGRRQKQLSEFGANVLRDEPVVVDKNII TSYNPSTAFHVAFKLLELLTSKENCVNVKRLMGF >Mature_194_residues MKKVLLLLANGFEAVEASVFTDVIGWNKLEGDGTTELITVGIREKLKCTFNFTVTPEMHVSEVNIDEFDALAVPGGFEEA EFYEDAYSEDFLNIIREFDKARKTIASICVGALPIGKSGVLVDRNATTYNLGNGRRQKQLSEFGANVLRDEPVVVDKNII TSYNPSTAFHVAFKLLELLTSKENCVNVKRLMGF
Specific function: Thiamine biosynthesis [C]
COG id: COG0693
COG function: function code R; Putative intracellular protease/amidase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Drosophila melanogaster, GI28571932, Length=193, Percent_Identity=26.9430051813472, Blast_Score=70, Evalue=1e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 21534; Mature: 21534
Theoretical pI: Translated: 4.70; Mature: 4.70
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKKVLLLLANGFEAVEASVFTDVIGWNKLEGDGTTELITVGIREKLKCTFNFTVTPEMHV CCCEEEEEECCHHHHHHHHHHHHHCCCCCCCCCCEEEEEEECCCEEEEEEEEEECCCCEE SEVNIDEFDALAVPGGFEEAEFYEDAYSEDFLNIIREFDKARKTIASICVGALPIGKSGV EECCCCCCCEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCE LVDRNATTYNLGNGRRQKQLSEFGANVLRDEPVVVDKNIITSYNPSTAFHVAFKLLELLT EEECCCCEEECCCCHHHHHHHHHHHHHHCCCCEEEECCEEECCCCCHHHHHHHHHHHHHH SKENCVNVKRLMGF CCCHHHHHHHHHCC >Mature Secondary Structure MKKVLLLLANGFEAVEASVFTDVIGWNKLEGDGTTELITVGIREKLKCTFNFTVTPEMHV CCCEEEEEECCHHHHHHHHHHHHHCCCCCCCCCCEEEEEEECCCEEEEEEEEEECCCCEE SEVNIDEFDALAVPGGFEEAEFYEDAYSEDFLNIIREFDKARKTIASICVGALPIGKSGV EECCCCCCCEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCE LVDRNATTYNLGNGRRQKQLSEFGANVLRDEPVVVDKNIITSYNPSTAFHVAFKLLELLT EEECCCCEEECCCCHHHHHHHHHHHHHHCCCCEEEECCEEECCCCCHHHHHHHHHHHHHH SKENCVNVKRLMGF CCCHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA