| Definition | Clostridium botulinum B1 str. Okra, complete genome. |
|---|---|
| Accession | NC_010516 |
| Length | 3,958,233 |
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The map label for this gene is 170756860
Identifier: 170756860
GI number: 170756860
Start: 952996
End: 953412
Strand: Reverse
Name: 170756860
Synonym: CLD_3730
Alternate gene names: NA
Gene position: 953412-952996 (Counterclockwise)
Preceding gene: 170754488
Following gene: 170756046
Centisome position: 24.09
GC content: 26.14
Gene sequence:
>417_bases ATGGCAAGAATAACTTTTTCACAAGAAGGACTTACACCATTTCAACAATTATTAGGTCATAATAAATATATAATGAAAAA ATGGACTTCTTTAGAAGAATGCTTTTTTAATAGTAATACATTTACACATAAATTAAAAGAAGAGGTAAGACGTACTCTTG CTTTTAATAACGGATGTCAATATTGTATGTCTAAAGGTAAACCATCTAATGAAATAACTGATTCAAAAATTTTAATTGCT ACTAAAATCGCAGATATTATTTCTAAAAATCAACTTATTGATAATGAATATTTTAATAGACTAAAAAGGGAATTTAGTGA TAATGAAGTTTCTGAACTTTTAGCCTTGATATGCTTTATAACAGCTTCTCAAAAATTCGGAGCATTACTTGATTTACAGC CAAGTTGTTCAATTTAA
Upstream 100 bases:
>100_bases TGTTTATTATTATATTATATATCAATTACAATACAATATTAATATTATAATTTGTATAATATTAATTGTTAATAAAATAT ATTTATAGAGGAGTAATACA
Downstream 100 bases:
>100_bases CTTATTAACAATAACTTAATAACATATAAAATTAATATTGATATCTATAACACAGGAGATTATATGTCAGTGATCTCCTA TTTTATCTAATTTTATAAGC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 138; Mature: 137
Protein sequence:
>138_residues MARITFSQEGLTPFQQLLGHNKYIMKKWTSLEECFFNSNTFTHKLKEEVRRTLAFNNGCQYCMSKGKPSNEITDSKILIA TKIADIISKNQLIDNEYFNRLKREFSDNEVSELLALICFITASQKFGALLDLQPSCSI
Sequences:
>Translated_138_residues MARITFSQEGLTPFQQLLGHNKYIMKKWTSLEECFFNSNTFTHKLKEEVRRTLAFNNGCQYCMSKGKPSNEITDSKILIA TKIADIISKNQLIDNEYFNRLKREFSDNEVSELLALICFITASQKFGALLDLQPSCSI >Mature_137_residues ARITFSQEGLTPFQQLLGHNKYIMKKWTSLEECFFNSNTFTHKLKEEVRRTLAFNNGCQYCMSKGKPSNEITDSKILIAT KIADIISKNQLIDNEYFNRLKREFSDNEVSELLALICFITASQKFGALLDLQPSCSI
Specific function: Unknown
COG id: COG2128
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 15855; Mature: 15724
Theoretical pI: Translated: 8.20; Mature: 8.20
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.6 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 5.8 %Cys+Met (Translated Protein) 3.6 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 5.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MARITFSQEGLTPFQQLLGHNKYIMKKWTSLEECFFNSNTFTHKLKEEVRRTLAFNNGCQ CCEECCCCCCCCHHHHHHCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCHH YCMSKGKPSNEITDSKILIATKIADIISKNQLIDNEYFNRLKREFSDNEVSELLALICFI HHHHCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCHHHHHHHHHHHH TASQKFGALLDLQPSCSI HCCHHHCCEECCCCCCCC >Mature Secondary Structure ARITFSQEGLTPFQQLLGHNKYIMKKWTSLEECFFNSNTFTHKLKEEVRRTLAFNNGCQ CEECCCCCCCCHHHHHHCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCHH YCMSKGKPSNEITDSKILIATKIADIISKNQLIDNEYFNRLKREFSDNEVSELLALICFI HHHHCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCHHHHHHHHHHHH TASQKFGALLDLQPSCSI HCCHHHCCEECCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA