| Definition | Clostridium botulinum B1 str. Okra, complete genome. |
|---|---|
| Accession | NC_010516 |
| Length | 3,958,233 |
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The map label for this gene is 170756590
Identifier: 170756590
GI number: 170756590
Start: 408388
End: 409896
Strand: Direct
Name: 170756590
Synonym: CLD_0424
Alternate gene names: NA
Gene position: 408388-409896 (Clockwise)
Preceding gene: 170755549
Following gene: 170755364
Centisome position: 10.32
GC content: 31.48
Gene sequence:
>1509_bases ATGAGAATAGGATTTGATCACGAAAAATACCTTGAAGAACAATCAAAGTACATATTAGAAAGAGTTAACAATTATGATAA ACTATATTTAGAATTTGGAGGAAAACTTTTATTTGACCTGCATGCAAAAAGAGTTTTACCTGGATTTGATGAAAATGCAA AAATTAAACTACTACATAAATTAAAAGAAAAAGTAGAAATAATTATTTGTTTATATGCAGGAGATATTGAAAGAAACAAA ATAAGAGGAGATTTTGGTATTACTTATGATGTTGATGTTTTAAGACTTATTGATGACTTAAGAGGATATGACCTTGAAGT AAATAGCGTTGTAATAACAAGATATAGCGGCCAGCCTGCAACTAATATATTTATAAATAAATTAGAACGTAGAGGCATAA AGGTTTATAGACATGAAGCTACTAAAGGATACCCTACAGATGTAGATACCATTGTAAGTGATGAAGGATATGGTAAAAAC CCATATATTGAGACAACAAAACCTATTGTAGTTGTGACAGCACCAGGTCCAGGAAGTGGTAAATTAGCTACTTGTCTTAG CCAACTTTACCATGAATATAAAAGAGGTAATGTGGCAGGGTATTCGAAATTTGAAACTTTCCCAGTGTGGAATGTACCTT TAAAACATCCTCTAAATATAGCCTATGAATCAGCTACAGTAGATCTTAAAGATGTGAATATGATAGATTCTTTCCATTTT GATGCTTACAACAAAGTAGCTGTAAACTATAACCGTGATATTGAAAGTTTCCCTGTACTTAAAAGAATTATAGAAAAGAT AACAGGAGAAGAATCCGTTTATAAATCTCCAACAGATATGGGGGTAAATAGAGTGGGATTTGGTATAGTCGATGATGAAG TTGTTAAAGAAGCATCTAAACAAGAAATAATAAGAAGAGCTTTTAAAACAGCCTGCGAATATAAAAAAGGATATGTAGAT AAAGAAACTTTTCATAGAGCTAAACTTATTATGGAAGAGATGAATTTAAAAGAAGAGGATAGGAAAGTTGTTATACCTGC AAGGGAATATGCAGCTAAATTAAAAGAAAGAGCTAACAAAAGTGAAACTTGTACAGTTGTAGCTTTAGAATTAGAGGATG GAACAATATTAACAGGTAGAAGTTCAGAGTTAATGGATGGAACAGCTGCTGTAATTTTAAATGCAGTTAAGCATTATGCA AATATATCTGATGAAATACATCTTATTTCACCAGTTATATTAGAACCGATTATAAATTTAAAAGCAAAAACTTTAGGAAG CAAAAGAACTGCTTTAAGTTGTGAAGAAGTGTTAATAGCCCTTAGCATATGTGCAGCTACAAATCCAACAGCTCAAGTAG CTATGGGTAAATTACCAATGCTAAAGGGATGTCAGGCTCATTCAACTACAATTTTGAGCACAAATGAAGAACAAACCTTT AGAAAGCTTGGAATAGATGTAACCTGTGATCCAGAATATATTTCAGAAAGCCTTTATTATAATAACTAA
Upstream 100 bases:
>100_bases ATTTACTTTCAATCAAAACTGTGTAATAATATAGAAATGTAAAAAACTAAAAAGTTCTTATAAATAAAAATAAAATAATA AAGTATAGTGAGGCGTAAAT
Downstream 100 bases:
>100_bases AATTAATATAAATTACATGCCCAAAATCATTATTCTAAAATTTGAAATAATGGTTTTGGGCATGCTTTTTATTTTCTATG AAAAATATAGATATAAAAAT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 502; Mature: 502
Protein sequence:
>502_residues MRIGFDHEKYLEEQSKYILERVNNYDKLYLEFGGKLLFDLHAKRVLPGFDENAKIKLLHKLKEKVEIIICLYAGDIERNK IRGDFGITYDVDVLRLIDDLRGYDLEVNSVVITRYSGQPATNIFINKLERRGIKVYRHEATKGYPTDVDTIVSDEGYGKN PYIETTKPIVVVTAPGPGSGKLATCLSQLYHEYKRGNVAGYSKFETFPVWNVPLKHPLNIAYESATVDLKDVNMIDSFHF DAYNKVAVNYNRDIESFPVLKRIIEKITGEESVYKSPTDMGVNRVGFGIVDDEVVKEASKQEIIRRAFKTACEYKKGYVD KETFHRAKLIMEEMNLKEEDRKVVIPAREYAAKLKERANKSETCTVVALELEDGTILTGRSSELMDGTAAVILNAVKHYA NISDEIHLISPVILEPIINLKAKTLGSKRTALSCEEVLIALSICAATNPTAQVAMGKLPMLKGCQAHSTTILSTNEEQTF RKLGIDVTCDPEYISESLYYNN
Sequences:
>Translated_502_residues MRIGFDHEKYLEEQSKYILERVNNYDKLYLEFGGKLLFDLHAKRVLPGFDENAKIKLLHKLKEKVEIIICLYAGDIERNK IRGDFGITYDVDVLRLIDDLRGYDLEVNSVVITRYSGQPATNIFINKLERRGIKVYRHEATKGYPTDVDTIVSDEGYGKN PYIETTKPIVVVTAPGPGSGKLATCLSQLYHEYKRGNVAGYSKFETFPVWNVPLKHPLNIAYESATVDLKDVNMIDSFHF DAYNKVAVNYNRDIESFPVLKRIIEKITGEESVYKSPTDMGVNRVGFGIVDDEVVKEASKQEIIRRAFKTACEYKKGYVD KETFHRAKLIMEEMNLKEEDRKVVIPAREYAAKLKERANKSETCTVVALELEDGTILTGRSSELMDGTAAVILNAVKHYA NISDEIHLISPVILEPIINLKAKTLGSKRTALSCEEVLIALSICAATNPTAQVAMGKLPMLKGCQAHSTTILSTNEEQTF RKLGIDVTCDPEYISESLYYNN >Mature_502_residues MRIGFDHEKYLEEQSKYILERVNNYDKLYLEFGGKLLFDLHAKRVLPGFDENAKIKLLHKLKEKVEIIICLYAGDIERNK IRGDFGITYDVDVLRLIDDLRGYDLEVNSVVITRYSGQPATNIFINKLERRGIKVYRHEATKGYPTDVDTIVSDEGYGKN PYIETTKPIVVVTAPGPGSGKLATCLSQLYHEYKRGNVAGYSKFETFPVWNVPLKHPLNIAYESATVDLKDVNMIDSFHF DAYNKVAVNYNRDIESFPVLKRIIEKITGEESVYKSPTDMGVNRVGFGIVDDEVVKEASKQEIIRRAFKTACEYKKGYVD KETFHRAKLIMEEMNLKEEDRKVVIPAREYAAKLKERANKSETCTVVALELEDGTILTGRSSELMDGTAAVILNAVKHYA NISDEIHLISPVILEPIINLKAKTLGSKRTALSCEEVLIALSICAATNPTAQVAMGKLPMLKGCQAHSTTILSTNEEQTF RKLGIDVTCDPEYISESLYYNN
Specific function: Unknown
COG id: COG4868
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UPF0371 family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR014999 [H]
Pfam domain/function: PF08903 DUF1846 [H]
EC number: NA
Molecular weight: Translated: 56695; Mature: 56695
Theoretical pI: Translated: 6.59; Mature: 6.59
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRIGFDHEKYLEEQSKYILERVNNYDKLYLEFGGKLLFDLHAKRVLPGFDENAKIKLLHK CCCCCCHHHHHHHHHHHHHHHHCCCCEEEEEECCEEEEEEHHHHHCCCCCCCCHHHHHHH LKEKVEIIICLYAGDIERNKIRGDFGITYDVDVLRLIDDLRGYDLEVNSVVITRYSGQPA HHHCEEEEEEEEECCCCCCCCCCCCCCEECHHHHHHHHHHCCCCEEECEEEEEEECCCCH TNIFINKLERRGIKVYRHEATKGYPTDVDTIVSDEGYGKNPYIETTKPIVVVTAPGPGSG HHHHHHHHHHCCCEEEEECCCCCCCCCHHHHCCCCCCCCCCCEECCCCEEEEECCCCCCC KLATCLSQLYHEYKRGNVAGYSKFETFPVWNVPLKHPLNIAYESATVDLKDVNMIDSFHF HHHHHHHHHHHHHHCCCCCCCCCCCCCCEECCCCCCCCCEEEECCEEEEHHCCHHHHHCC DAYNKVAVNYNRDIESFPVLKRIIEKITGEESVYKSPTDMGVNRVGFGIVDDEVVKEASK CCCCEEEEEECCCCHHHHHHHHHHHHHCCCCHHCCCCHHCCCCCCCCCCCCHHHHHHHHH QEIIRRAFKTACEYKKGYVDKETFHRAKLIMEEMNLKEEDRKVVIPAREYAAKLKERANK HHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCCEEEEEHHHHHHHHHHHCCC SETCTVVALELEDGTILTGRSSELMDGTAAVILNAVKHYANISDEIHLISPVILEPIINL CCCEEEEEEEECCCEEEECCCCHHHCHHHHHHHHHHHHHHCCCCCEEEHHHHHHHHHHCC KAKTLGSKRTALSCEEVLIALSICAATNPTAQVAMGKLPMLKGCQAHSTTILSTNEEQTF HHHHCCCCCCCCCHHHHHHHHHHHHCCCCHHHHHHCCCCCCCCCCCCCEEEEECCHHHHH RKLGIDVTCDPEYISESLYYNN HHHCCCEEECHHHHHHHHCCCC >Mature Secondary Structure MRIGFDHEKYLEEQSKYILERVNNYDKLYLEFGGKLLFDLHAKRVLPGFDENAKIKLLHK CCCCCCHHHHHHHHHHHHHHHHCCCCEEEEEECCEEEEEEHHHHHCCCCCCCCHHHHHHH LKEKVEIIICLYAGDIERNKIRGDFGITYDVDVLRLIDDLRGYDLEVNSVVITRYSGQPA HHHCEEEEEEEEECCCCCCCCCCCCCCEECHHHHHHHHHHCCCCEEECEEEEEEECCCCH TNIFINKLERRGIKVYRHEATKGYPTDVDTIVSDEGYGKNPYIETTKPIVVVTAPGPGSG HHHHHHHHHHCCCEEEEECCCCCCCCCHHHHCCCCCCCCCCCEECCCCEEEEECCCCCCC KLATCLSQLYHEYKRGNVAGYSKFETFPVWNVPLKHPLNIAYESATVDLKDVNMIDSFHF HHHHHHHHHHHHHHCCCCCCCCCCCCCCEECCCCCCCCCEEEECCEEEEHHCCHHHHHCC DAYNKVAVNYNRDIESFPVLKRIIEKITGEESVYKSPTDMGVNRVGFGIVDDEVVKEASK CCCCEEEEEECCCCHHHHHHHHHHHHHCCCCHHCCCCHHCCCCCCCCCCCCHHHHHHHHH QEIIRRAFKTACEYKKGYVDKETFHRAKLIMEEMNLKEEDRKVVIPAREYAAKLKERANK HHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCCEEEEEHHHHHHHHHHHCCC SETCTVVALELEDGTILTGRSSELMDGTAAVILNAVKHYANISDEIHLISPVILEPIINL CCCEEEEEEEECCCEEEECCCCHHHCHHHHHHHHHHHHHHCCCCCEEEHHHHHHHHHHCC KAKTLGSKRTALSCEEVLIALSICAATNPTAQVAMGKLPMLKGCQAHSTTILSTNEEQTF HHHHCCCCCCCCCHHHHHHHHHHHHCCCCHHHHHHCCCCCCCCCCCCCEEEEECCHHHHH RKLGIDVTCDPEYISESLYYNN HHHCCCEEECHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA