Click here to switch to the map view.

The map label for this gene is yvdB [H]

Identifier: 170756501

GI number: 170756501

Start: 3638195

End: 3639853

Strand: Reverse

Name: yvdB [H]

Synonym: CLD_1173

Alternate gene names: 170756501

Gene position: 3639853-3638195 (Counterclockwise)

Preceding gene: 170756242

Following gene: 170757116

Centisome position: 91.96

GC content: 31.04

Gene sequence:

>1659_bases
ATGTTAAAACCAGAAATTTTAGACATATTAAAATGCAAAAAGGGAGGATTAACCAAAGAAGGATTAATAAAAGATTTTAT
AGCTGGTATTATAGTAGCAATAATAGCTTTACCATTATCTGTGGCTTTAGGTATAGCCTCGGGAGTATCCCCAGAAAAGG
GACTTATTACAGCCATAATAGCAGGATTTTTAATCTCATTTTTAGGAGGCAGTAGAGTCCAAATAGGAGGACCTACAGGA
GCCTTTGTTGTTATTATATATGGCATCATAGAGAAATATGGCATAGATGGACTTGTAATAGCCACATTGATGGCAGGGAT
AATACTTGTTATCTTTGGGTTGTTAAAATTCGGCTCTTTAATTAAATACATATCTTATCCAATAACAGTTGGATTTACAG
CAGGGATAGCTGTTACCCTATTTTCTACTCAAGTTAAGGATTTCTTAGGGTTAGCAATAAATAAAGTACCATCAGAATTT
TTACCCAAATGGTCAATGTACATATTTAACATAGGAACATTAAGTTGGCAAACTTTAAGTCTAGGCATTTTTTCTTTATT
AGTTTTAATAATATGGCCTAAATTTAGTAAAAAAGTACCAGGAGCGTTAGTCGCACTAATACTATCTACTCTTATAGCTT
ATTTTTTAAAGCTAAATGTGGCAACTATAGGAAGTCAATTTGGAGAAATATCATCTAAAATAGAACTACCTAAATTACCA
GGAGTAGATATCATTACGTTACAAAAGTTAATTAAGCCAGCCTTTACTATAGCTATTTTAGCAGCTATAGAATCTCTATT
ATCTGCGGTGGTAGCAGATAGTATGATAGGTGAAAAACATAATTCAAATATGGAGCTAATAGCCCAAGGAATTGGGAATA
TTGCATCAGCTTTGTTTGGTGGAATACCAGCTACAGGAGCTATTGCAAGAACAGCAGCTAATGTTAAAAATGGGGGAAGA
ACTCCTATAGCAGGAATGGTACATGCTATAACATTATTATTAATAATGAAAATTTTTATGCCCTTAGCAAAGTATATTCC
GTTGACTACTTTAGCAGCTATATTAATAGTTGTATCTTATAATATGAGTGGATGGAGAATTTTTAAAGCTATGCTAAAAG
CACCAAAAAGTGATGTAATAATATTATTAGCAACATTTTTTCTAACAGTTATATTTGATTTAGTAATAGCTATAGAAGTA
GGGATATTCATATCCATGTGTTTATTTATGAGAAGAATGGCCTTAGCTATAGAGGTTAATGAATTGGATGAAAATTATTG
TTCTAAAAGACTAAGCTTAGAAAGTATACATACAAATAAAATAGGTAATGAAATATTAATATATGATATAAATGGTCCAT
TATTTTTTGCAGGTATAGATAGTTTTCTATCTTCAATAGAAAGCTTAGACACAGAATCAAAGGTAGTAATATTAAGAATG
AAAAATATGCCTGTACTAGATGTTACAGCCTATAGTGAGTTAAAGAAAATAGAAAAGTTATGTAGAGAAGAGGAAATAAA
ATTAATTATGTCCGAAGTACAAGCTCAACCTATGGGAGTTATGAAAAATATGGGGATGGTTTCAAGATTAGGGGAAAATA
GATTTATAAAAACTTTAGAGGAAGCCATAAAAACAGCTAATAACTGTTGCATTAATTAA

Upstream 100 bases:

>100_bases
TCTTATATACTTAAATTTTTGTACAAATGCAACCTATTATAAAAAAGAATTTACACTGATAAATCGGTATAATAATAGTT
GAGTACAAGGAGGTAAATAA

Downstream 100 bases:

>100_bases
TTCATAAATAAGAGATTAAGTATGATTGAAATCAAATCTATAAGGTAGGTCTTTCTAAAAGGTCTACCTTATAGATTTTC
TGGTTTACAATGGAACAAAG

Product: SulP family sulfate permease

Products: Proton [Cytoplasm]; SO42- [Cytoplasm] [C]

Alternate protein names: NA

Number of amino acids: Translated: 552; Mature: 552

Protein sequence:

>552_residues
MLKPEILDILKCKKGGLTKEGLIKDFIAGIIVAIIALPLSVALGIASGVSPEKGLITAIIAGFLISFLGGSRVQIGGPTG
AFVVIIYGIIEKYGIDGLVIATLMAGIILVIFGLLKFGSLIKYISYPITVGFTAGIAVTLFSTQVKDFLGLAINKVPSEF
LPKWSMYIFNIGTLSWQTLSLGIFSLLVLIIWPKFSKKVPGALVALILSTLIAYFLKLNVATIGSQFGEISSKIELPKLP
GVDIITLQKLIKPAFTIAILAAIESLLSAVVADSMIGEKHNSNMELIAQGIGNIASALFGGIPATGAIARTAANVKNGGR
TPIAGMVHAITLLLIMKIFMPLAKYIPLTTLAAILIVVSYNMSGWRIFKAMLKAPKSDVIILLATFFLTVIFDLVIAIEV
GIFISMCLFMRRMALAIEVNELDENYCSKRLSLESIHTNKIGNEILIYDINGPLFFAGIDSFLSSIESLDTESKVVILRM
KNMPVLDVTAYSELKKIEKLCREEEIKLIMSEVQAQPMGVMKNMGMVSRLGENRFIKTLEEAIKTANNCCIN

Sequences:

>Translated_552_residues
MLKPEILDILKCKKGGLTKEGLIKDFIAGIIVAIIALPLSVALGIASGVSPEKGLITAIIAGFLISFLGGSRVQIGGPTG
AFVVIIYGIIEKYGIDGLVIATLMAGIILVIFGLLKFGSLIKYISYPITVGFTAGIAVTLFSTQVKDFLGLAINKVPSEF
LPKWSMYIFNIGTLSWQTLSLGIFSLLVLIIWPKFSKKVPGALVALILSTLIAYFLKLNVATIGSQFGEISSKIELPKLP
GVDIITLQKLIKPAFTIAILAAIESLLSAVVADSMIGEKHNSNMELIAQGIGNIASALFGGIPATGAIARTAANVKNGGR
TPIAGMVHAITLLLIMKIFMPLAKYIPLTTLAAILIVVSYNMSGWRIFKAMLKAPKSDVIILLATFFLTVIFDLVIAIEV
GIFISMCLFMRRMALAIEVNELDENYCSKRLSLESIHTNKIGNEILIYDINGPLFFAGIDSFLSSIESLDTESKVVILRM
KNMPVLDVTAYSELKKIEKLCREEEIKLIMSEVQAQPMGVMKNMGMVSRLGENRFIKTLEEAIKTANNCCIN
>Mature_552_residues
MLKPEILDILKCKKGGLTKEGLIKDFIAGIIVAIIALPLSVALGIASGVSPEKGLITAIIAGFLISFLGGSRVQIGGPTG
AFVVIIYGIIEKYGIDGLVIATLMAGIILVIFGLLKFGSLIKYISYPITVGFTAGIAVTLFSTQVKDFLGLAINKVPSEF
LPKWSMYIFNIGTLSWQTLSLGIFSLLVLIIWPKFSKKVPGALVALILSTLIAYFLKLNVATIGSQFGEISSKIELPKLP
GVDIITLQKLIKPAFTIAILAAIESLLSAVVADSMIGEKHNSNMELIAQGIGNIASALFGGIPATGAIARTAANVKNGGR
TPIAGMVHAITLLLIMKIFMPLAKYIPLTTLAAILIVVSYNMSGWRIFKAMLKAPKSDVIILLATFFLTVIFDLVIAIEV
GIFISMCLFMRRMALAIEVNELDENYCSKRLSLESIHTNKIGNEILIYDINGPLFFAGIDSFLSSIESLDTESKVVILRM
KNMPVLDVTAYSELKKIEKLCREEEIKLIMSEVQAQPMGVMKNMGMVSRLGENRFIKTLEEAIKTANNCCIN

Specific function: Possible Sulfate Transporter. [C]

COG id: COG0659

COG function: function code P; Sulfate permease and related transporters (MFS superfamily)

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 STAS domain [H]

Homologues:

Organism=Homo sapiens, GI262206105, Length=428, Percent_Identity=26.8691588785047, Blast_Score=120, Evalue=3e-27,
Organism=Homo sapiens, GI262206075, Length=428, Percent_Identity=26.8691588785047, Blast_Score=120, Evalue=3e-27,
Organism=Homo sapiens, GI262206069, Length=428, Percent_Identity=26.8691588785047, Blast_Score=120, Evalue=3e-27,
Organism=Homo sapiens, GI262206063, Length=428, Percent_Identity=26.8691588785047, Blast_Score=120, Evalue=3e-27,
Organism=Homo sapiens, GI16306483, Length=560, Percent_Identity=22.5, Blast_Score=104, Evalue=2e-22,
Organism=Homo sapiens, GI94721259, Length=422, Percent_Identity=25.8293838862559, Blast_Score=104, Evalue=2e-22,
Organism=Homo sapiens, GI20336282, Length=558, Percent_Identity=22.5806451612903, Blast_Score=104, Evalue=2e-22,
Organism=Homo sapiens, GI94721253, Length=422, Percent_Identity=25.8293838862559, Blast_Score=104, Evalue=2e-22,
Organism=Homo sapiens, GI94721255, Length=422, Percent_Identity=25.8293838862559, Blast_Score=104, Evalue=3e-22,
Organism=Homo sapiens, GI94721257, Length=422, Percent_Identity=25.8293838862559, Blast_Score=103, Evalue=4e-22,
Organism=Homo sapiens, GI4557535, Length=600, Percent_Identity=23.8333333333333, Blast_Score=94, Evalue=3e-19,
Organism=Homo sapiens, GI45827800, Length=509, Percent_Identity=22.9862475442043, Blast_Score=91, Evalue=2e-18,
Organism=Homo sapiens, GI39752683, Length=509, Percent_Identity=22.9862475442043, Blast_Score=91, Evalue=3e-18,
Organism=Homo sapiens, GI4505697, Length=401, Percent_Identity=26.1845386533666, Blast_Score=85, Evalue=2e-16,
Organism=Homo sapiens, GI45827802, Length=421, Percent_Identity=23.7529691211401, Blast_Score=84, Evalue=3e-16,
Organism=Homo sapiens, GI47131207, Length=509, Percent_Identity=21.6110019646365, Blast_Score=84, Evalue=3e-16,
Organism=Homo sapiens, GI20336272, Length=509, Percent_Identity=21.6110019646365, Blast_Score=84, Evalue=3e-16,
Organism=Homo sapiens, GI100913030, Length=447, Percent_Identity=24.8322147651007, Blast_Score=83, Evalue=8e-16,
Organism=Homo sapiens, GI269784651, Length=422, Percent_Identity=23.2227488151659, Blast_Score=80, Evalue=6e-15,
Organism=Escherichia coli, GI87081859, Length=554, Percent_Identity=38.086642599278, Blast_Score=334, Evalue=1e-92,
Organism=Caenorhabditis elegans, GI86565215, Length=442, Percent_Identity=26.6968325791855, Blast_Score=108, Evalue=6e-24,
Organism=Caenorhabditis elegans, GI17551690, Length=589, Percent_Identity=20.5432937181664, Blast_Score=98, Evalue=9e-21,
Organism=Caenorhabditis elegans, GI86564876, Length=437, Percent_Identity=24.7139588100687, Blast_Score=96, Evalue=5e-20,
Organism=Caenorhabditis elegans, GI193203292, Length=565, Percent_Identity=21.9469026548673, Blast_Score=96, Evalue=6e-20,
Organism=Caenorhabditis elegans, GI86564196, Length=500, Percent_Identity=24.6, Blast_Score=91, Evalue=1e-18,
Organism=Caenorhabditis elegans, GI17566848, Length=535, Percent_Identity=22.6168224299065, Blast_Score=83, Evalue=4e-16,
Organism=Caenorhabditis elegans, GI86565211, Length=246, Percent_Identity=28.4552845528455, Blast_Score=71, Evalue=1e-12,
Organism=Caenorhabditis elegans, GI86565209, Length=246, Percent_Identity=28.4552845528455, Blast_Score=71, Evalue=1e-12,
Organism=Saccharomyces cerevisiae, GI6319771, Length=431, Percent_Identity=24.3619489559165, Blast_Score=90, Evalue=9e-19,
Organism=Saccharomyces cerevisiae, GI6325260, Length=426, Percent_Identity=24.8826291079812, Blast_Score=87, Evalue=8e-18,
Organism=Saccharomyces cerevisiae, GI6323121, Length=126, Percent_Identity=32.5396825396825, Blast_Score=64, Evalue=6e-11,
Organism=Saccharomyces cerevisiae, GI6321564, Length=275, Percent_Identity=23.2727272727273, Blast_Score=64, Evalue=9e-11,
Organism=Drosophila melanogaster, GI19922482, Length=503, Percent_Identity=24.0556660039761, Blast_Score=124, Evalue=2e-28,
Organism=Drosophila melanogaster, GI85815873, Length=517, Percent_Identity=26.1121856866538, Blast_Score=120, Evalue=2e-27,
Organism=Drosophila melanogaster, GI21358229, Length=440, Percent_Identity=26.1363636363636, Blast_Score=117, Evalue=3e-26,
Organism=Drosophila melanogaster, GI24663084, Length=526, Percent_Identity=23.9543726235741, Blast_Score=110, Evalue=2e-24,
Organism=Drosophila melanogaster, GI21357695, Length=526, Percent_Identity=23.9543726235741, Blast_Score=110, Evalue=2e-24,
Organism=Drosophila melanogaster, GI24651449, Length=434, Percent_Identity=22.5806451612903, Blast_Score=107, Evalue=2e-23,
Organism=Drosophila melanogaster, GI24649801, Length=439, Percent_Identity=21.8678815489749, Blast_Score=102, Evalue=5e-22,
Organism=Drosophila melanogaster, GI24666186, Length=278, Percent_Identity=26.6187050359712, Blast_Score=82, Evalue=1e-15,
Organism=Drosophila melanogaster, GI24647160, Length=293, Percent_Identity=22.1843003412969, Blast_Score=70, Evalue=4e-12,
Organism=Drosophila melanogaster, GI21355087, Length=293, Percent_Identity=22.1843003412969, Blast_Score=70, Evalue=4e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002645
- InterPro:   IPR001902
- InterPro:   IPR011547 [H]

Pfam domain/function: PF01740 STAS; PF00916 Sulfate_transp [H]

EC number: NA

Molecular weight: Translated: 59673; Mature: 59673

Theoretical pI: Translated: 9.45; Mature: 9.45

Prosite motif: PS50801 STAS

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
3.6 %Met     (Translated Protein)
4.7 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
3.6 %Met     (Mature Protein)
4.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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HHHHHHCCCCCC
>Mature Secondary Structure
MLKPEILDILKCKKGGLTKEGLIKDFIAGIIVAIIALPLSVALGIASGVSPEKGLITAII
CCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHH
AGFLISFLGGSRVQIGGPTGAFVVIIYGIIEKYGIDGLVIATLMAGIILVIFGLLKFGSL
HHHHHHHHCCCEEEECCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHH
IKYISYPITVGFTAGIAVTLFSTQVKDFLGLAINKVPSEFLPKWSMYIFNIGTLSWQTLS
HHHHHCCHHEEHHHHHHHHHHHHHHHHHHHHHHHHCCHHHCCCHHHHEEEECCCCHHHHH
LGIFSLLVLIIWPKFSKKVPGALVALILSTLIAYFLKLNVATIGSQFGEISSKIELPKLP
HHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC
GVDIITLQKLIKPAFTIAILAAIESLLSAVVADSMIGEKHNSNMELIAQGIGNIASALFG
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHC
GIPATGAIARTAANVKNGGRTPIAGMVHAITLLLIMKIFMPLAKYIPLTTLAAILIVVSY
CCCCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHC
NMSGWRIFKAMLKAPKSDVIILLATFFLTVIFDLVIAIEVGIFISMCLFMRRMALAIEVN
CCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ELDENYCSKRLSLESIHTNKIGNEILIYDINGPLFFAGIDSFLSSIESLDTESKVVILRM
HHHHHHHHHHCCHHHHHHHCCCCEEEEEECCCCEEHHHHHHHHHHHHHCCCCCCEEEEEE
KNMPVLDVTAYSELKKIEKLCREEEIKLIMSEVQAQPMGVMKNMGMVSRLGENRFIKTLE
CCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHCHHHHHHCCHHHHHHHH
EAIKTANNCCIN
HHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: Proton [Periplasm]; SO42- [Periplasm] [C]

Specific reaction: Proton [Periplasm] + SO42- [Periplasm] = Proton [Cytoplasm] + SO42- [Cytoplasm] [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]