| Definition | Clostridium botulinum B1 str. Okra, complete genome. |
|---|---|
| Accession | NC_010516 |
| Length | 3,958,233 |
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The map label for this gene is 170756408
Identifier: 170756408
GI number: 170756408
Start: 977724
End: 978152
Strand: Reverse
Name: 170756408
Synonym: CLD_3700
Alternate gene names: NA
Gene position: 978152-977724 (Counterclockwise)
Preceding gene: 170755124
Following gene: 170755630
Centisome position: 24.71
GC content: 26.57
Gene sequence:
>429_bases TTGAATAAGTATAGAAATTTAGCTGTTTTAAACGGTATTCTTCTTGCTATAATGATATTTTTAAATGGCGTTCTATCAGA AAAGATAGGTTTATATCTTAGTACATTAATTTACCACGTCTTAGGACTTCTATTAATTTTACTAGTATCAATAGTAAGAA AAAATAAACTTCCTAAATTGAATAAAATACCCGTTATTCTTTTTCTACCAGGCATACTAAGTGTTTTAGTCATATTCTTA AATAATCTATCTTCATCCAAAATAGGAATAACACTTACCGCAGGTATGGGGCTATTGGGACAACTTGTAATATCTGCATT AATAGACCATTTTGGATTATTTGGTGTTCAAGTTAACAAAATGAGAAAAGAAAAAATACTAAGTTTTTCACTAATCATAA CAGGTTTAATTTTTATGATTTTATTATAA
Upstream 100 bases:
>100_bases AAATTCTTCTCATAAAACCTCCTAACATGACTAATGTCATGTCCTAATTGTTATAAATATATTATTTTATTTATAACGAC TTGTAAAGGGGTGAATAAAT
Downstream 100 bases:
>100_bases AGAGGTGCATATAATGTATATATTTTTTTCATTTTTGACAGGAGTATTAATTGTTACAAGTATGATATTAAATGGAGAAT TATCTAAGCGAATAGGTACT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 142; Mature: 142
Protein sequence:
>142_residues MNKYRNLAVLNGILLAIMIFLNGVLSEKIGLYLSTLIYHVLGLLLILLVSIVRKNKLPKLNKIPVILFLPGILSVLVIFL NNLSSSKIGITLTAGMGLLGQLVISALIDHFGLFGVQVNKMRKEKILSFSLIITGLIFMILL
Sequences:
>Translated_142_residues MNKYRNLAVLNGILLAIMIFLNGVLSEKIGLYLSTLIYHVLGLLLILLVSIVRKNKLPKLNKIPVILFLPGILSVLVIFL NNLSSSKIGITLTAGMGLLGQLVISALIDHFGLFGVQVNKMRKEKILSFSLIITGLIFMILL >Mature_142_residues MNKYRNLAVLNGILLAIMIFLNGVLSEKIGLYLSTLIYHVLGLLLILLVSIVRKNKLPKLNKIPVILFLPGILSVLVIFL NNLSSSKIGITLTAGMGLLGQLVISALIDHFGLFGVQVNKMRKEKILSFSLIITGLIFMILL
Specific function: Unknown
COG id: COG3238
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 15612; Mature: 15612
Theoretical pI: Translated: 11.02; Mature: 11.02
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.5 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.5 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNKYRNLAVLNGILLAIMIFLNGVLSEKIGLYLSTLIYHVLGLLLILLVSIVRKNKLPKL CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC NKIPVILFLPGILSVLVIFLNNLSSSKIGITLTAGMGLLGQLVISALIDHFGLFGVQVNK CCCHHHHHHHHHHHHHHHHHHCCCCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHH MRKEKILSFSLIITGLIFMILL HHHHHHHHHHHHHHHHHHHHHC >Mature Secondary Structure MNKYRNLAVLNGILLAIMIFLNGVLSEKIGLYLSTLIYHVLGLLLILLVSIVRKNKLPKL CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC NKIPVILFLPGILSVLVIFLNNLSSSKIGITLTAGMGLLGQLVISALIDHFGLFGVQVNK CCCHHHHHHHHHHHHHHHHHHCCCCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHH MRKEKILSFSLIITGLIFMILL HHHHHHHHHHHHHHHHHHHHHC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA