| Definition | Clostridium botulinum B1 str. Okra, complete genome. |
|---|---|
| Accession | NC_010516 |
| Length | 3,958,233 |
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The map label for this gene is 170756379
Identifier: 170756379
GI number: 170756379
Start: 3712327
End: 3712689
Strand: Reverse
Name: 170756379
Synonym: CLD_1106
Alternate gene names: NA
Gene position: 3712689-3712327 (Counterclockwise)
Preceding gene: 170757437
Following gene: 170756152
Centisome position: 93.8
GC content: 25.9
Gene sequence:
>363_bases ATGGAAGTGGTATTAGAAAACCTTATTAAAGGTCAAAATTTAGAAGATAAGGAGTATATATATTACTACAAACTTATAAA AAGTGATTTGTATATTTCTTGGCAAGAGGAAGACATAAAAGTTCAATCCTACGGTATAGAAATAATAAGAAAGGATTTTC AAAAAGAACAACTTACAAACTTAGAAAGTAACAATATAAGACATATAAGTCCTCATAGATATAAAGTACATAATTTATTA AAAATGCTTTACGAACAAACAGTTTCACCTATTCATCTTATAGACATAATTGGAGAATACACAGATGAATATGTAGTCGA TTATGAAAATGTATTAAAAAATGCATCTTCTATGTGTAAATGA
Upstream 100 bases:
>100_bases ATAAGAAAATTATAAGTGCATTTCATTAAATGACATATTTTTGTGGGTAACCTATGTTAGCATATTAATAAAGTTATTTT GTTGGCAGGGGGATAGTATT
Downstream 100 bases:
>100_bases AATAATTATATATAATTTATAAGGATAAATAGTAATAGATTTTAACTATTTATCCTTTGTTTTTTACTTATAAATAGTTT ATTATATAATATAATTTAAG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 120; Mature: 120
Protein sequence:
>120_residues MEVVLENLIKGQNLEDKEYIYYYKLIKSDLYISWQEEDIKVQSYGIEIIRKDFQKEQLTNLESNNIRHISPHRYKVHNLL KMLYEQTVSPIHLIDIIGEYTDEYVVDYENVLKNASSMCK
Sequences:
>Translated_120_residues MEVVLENLIKGQNLEDKEYIYYYKLIKSDLYISWQEEDIKVQSYGIEIIRKDFQKEQLTNLESNNIRHISPHRYKVHNLL KMLYEQTVSPIHLIDIIGEYTDEYVVDYENVLKNASSMCK >Mature_120_residues MEVVLENLIKGQNLEDKEYIYYYKLIKSDLYISWQEEDIKVQSYGIEIIRKDFQKEQLTNLESNNIRHISPHRYKVHNLL KMLYEQTVSPIHLIDIIGEYTDEYVVDYENVLKNASSMCK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 14408; Mature: 14408
Theoretical pI: Translated: 4.97; Mature: 4.97
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MEVVLENLIKGQNLEDKEYIYYYKLIKSDLYISWQEEDIKVQSYGIEIIRKDFQKEQLTN CHHHHHHHHCCCCCCCCHHHHHHHHHHHCEEEEECCCCEEHHHHHHHHHHHHHHHHHHCC LESNNIRHISPHRYKVHNLLKMLYEQTVSPIHLIDIIGEYTDEYVVDYENVLKNASSMCK CCCCCEECCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure MEVVLENLIKGQNLEDKEYIYYYKLIKSDLYISWQEEDIKVQSYGIEIIRKDFQKEQLTN CHHHHHHHHCCCCCCCCHHHHHHHHHHHCEEEEECCCCEEHHHHHHHHHHHHHHHHHHCC LESNNIRHISPHRYKVHNLLKMLYEQTVSPIHLIDIIGEYTDEYVVDYENVLKNASSMCK CCCCCEECCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA